Gasterosteus aculeatus (three-spined stickleback): 120822508
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Entry
120822508 CDS
T07457
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120822508 (sox19b)
Transcription factors [BR:
gat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120822508 (sox19b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120822508
NCBI-ProteinID:
XP_040038199
UniProt:
G3Q9G0
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All DBs
Position
VII:10837734..10842331
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AA seq
306 aa
AA seq
DB search
MYSMMEHELKPTGQPPSHQTSQGMSPVTGNMTGGMGGNGNSHPGSKTACAPGVDPMDKVK
RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHM
KEYPDYKYKPRRKTKPMLKKDNQVGKYPLSAGSLLAAAQGQGGSPRMDSYGWGPTGGYAG
MQGEALGYTQQLHRYDLSALQYPPAMSAAQTYMNGGNSYSPMSYSSSPQQPSPVTMSMVK
AEPGPHSPPTGTPNHHRGPLQGDLRDMISMYIPGPGGDAGDPTAAQRGYTSVQQHYLSGT
VPLTHI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacacgagctgaagcccaccggccagcccccgtcccaccagacc
tcccagggaatgtcacccgtcaccggcaacatgaccgggggcatgggcggcaatggcaac
tctcacccgggctctaaaaccgcgtgcgcccccggagtcgaccccatggataaagtcaag
cgccccatgaacgccttcatggtgtggtccaggggacagaggcgcaagatggctcaagag
aaccccaaaatgcacaactccgagatcagcaagcggctcggagccgagtggaagctgctg
accgacgccgagaagcggcctttcatcgacgaggccaagcggctgcgggcggtccacatg
aaggagtaccccgactacaagtacaagccgcgccgcaagaccaagcccatgctcaagaag
gacaaccaggtgggcaagtacccgctgtcggcaggtagcctgctggcggccgcgcagggc
caaggtggcagcccgaggatggacagctacggctggggcccaaccggagggtacgccggc
atgcagggcgaggcgctcggctacacgcagcagctgcaccggtacgacctgtcggcgctc
cagtacccgcccgccatgtccgcggcgcagacctacatgaacggaggaaactcgtacagc
cccatgtcgtacagcagcagcccccagcagccgagccctgtcaccatgtccatggtgaaa
gcggaaccggggccccactctcccccgacggggacgcccaaccaccaccgaggccctttg
cagggtgacctcagggacatgatcagcatgtacatccccggaccagggggggacgccgga
gaccccacggctgcacagaggggctacaccagcgtccagcagcactacctctctggaacc
gtcccactcacacacatctag
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