Gasterosteus aculeatus (three-spined stickleback): 120822515
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Entry
120822515 CDS
T07457
Symbol
robo4
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120822515 (robo4)
Cell adhesion molecules [BR:
gat04515
]
Immunoglobulin superfamily
ROBO family
120822515 (robo4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_6
BiPBP_C
C1-set
Motif
Other DBs
NCBI-GeneID:
120822515
NCBI-ProteinID:
XP_040038208
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Position
VII:14504379..14522453
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AA seq
1165 aa
AA seq
DB search
MRVGAWLLWVSWFFTWTEFSQRYECHDACPTESGLDGRSKSRVKEHVLHGVGHKHTPHRS
RLYRKKGSRVHAQETAPRIVHHPADVVVKVGNPATLSCRVDGSPVPTIEWLRNGQPLETA
QGEEQLQPIVLSEGSIFFLSVGGGRRGQSHEGVYTCVARSRAGMATSRNATLYIAVLQEE
FTLQPSDVEVAEGEMAVLNCGPPMGQPEPNVIWKKNGFPINNTDHHYKALNETLIIAPAE
KNYSGAYVCVASNPGGVRESRAARLSVLAKPLLVLKPQNVSVQMGESAQFYCEAKGDPPP
AVVWSREQGLLPNGRYLVNPDHTLQIHYVTAQDAGGYTCTAVNDAGVASGSAQLLVEEPS
SKQRDLHKELSALRIALDNVTIMAPGSNISRVQWKLQPPPAQPHYLDGFEVLYRSLLPAS
SDWTAKTVSLPSFQTPVGPLKRGYMYEFKVRPYGSSLYGRESNTRHLRVPETVPSASPLA
VSITVSHEQNNTIYLSWGPPPHETHNGIIQGYQVFCVESEGQRYQNWTVNSSQHNLKIST
LIPGRRYWITIAAVNGAGVGMLSDPHGFVINPQMGNPPASDGQNRDLSQVVALLKDPVLI
GIIGVLLCCVLMVAAVYLFRRHGRTGSLIPARGRDKGLRRLASEDLIIKHRMAAPDSPWI
SGGWRPAFNQKYQDLWAHDQKHPGLRGPSLPAPYKEGSRVDSAVPIVTDSCGVYGTFYVD
LMASGLKTFNSPGCRPKMPHSLPHHQGAETIQIFPQPVAKTPPLSSREALPWKQGIRPQP
KMGVLRETWEKSHSKQELHAVNSVPIVPTRNRACPSALYKQRLSHVPSGRLECDQVTGCP
RLLHYSASLHLVDMLPPPPPMPMDDTVDTYSVTSDEGSSWSTKLTGDMGSLQSVSVASGH
RWQPQATDHSCPSCTHCSSTSYSTSGDGERGGTLTPKDAAQYLELCPRPERCSTCIHLIM
PPPSISSALPEQHPSPPHSFSPTLGYTCGPVRSARADGDSAIAECEYLPIGLRHARLRST
PSSCYSEWDSSAWHTWSSVTDSNMASARTSLISSADSCYTDDSAHLARLLAAAAETMSAA
SLSDFSPPASPLSALYPAFFGEGTQLGELDPCPAWDWSSAWVEAMEARCRAHRPGSNSRP
FDAKGTGQAFHTTYLDQGDSFPSQE
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttggtgcatggcttctctgggtgtcctggttcttcacctggacagagttctca
cagaggtacgagtgccatgacgcatgtccaacagagtcagggctggacgggaggtcaaag
agccgggtcaaggagcatgttttacacggtgtgggacacaagcacacaccacaccggagc
aggctttaccgcaaaaaaggctccagagttcatgcacaggagacagccccccgcattgtg
caccacccggcagacgtggtggtgaaggtggggaatcccgccacgctctcctgccgggtg
gacggcagccccgtgccgaccatcgagtggctgcgtaacggccagcctctggagacggcc
cagggggaggaacagctgcagcccatcgtcttatcagaggggagcatcttcttcctgagc
gtgggggggggcaggcggggtcagtcgcacgagggtgtctacacctgcgtagccaggagc
agggcaggcatggccaccagccgcaatgctacgctgtacatcgcagtgctgcaggaggag
ttcactttgcagcccagtgacgtggaggtagcagaaggggagatggcggtcttaaactgc
ggccccccaatgggacagcctgaaccgaatgtcatctggaagaaaaatggctttcccatc
aacaacactgaccaccactacaaagcgctgaatgagacgctcatcatcgctcctgcagag
aagaactactctggtgcttatgtgtgcgtggccagcaaccccgggggagtgagggagagc
agggcggcgcgcctctccgtgctggccaagccgctgttggtgctgaagccgcaaaatgtg
tctgtgcaaatgggggagtcggcccagttttactgcgaggctaaaggtgaccccccgcct
gctgtggtctggagcagagagcaggggctactgcccaacggcagatatcttgtaaaccca
gaccacaccctccagatccactacgtgacggcccaggatgctggggggtacacctgcact
gctgtcaatgatgccggtgtggccagtggcagcgcacagcttctagttgaagagcccagc
agtaaacagagagacctgcacaaagagttgtcagccctacgaattgctctggacaacgtg
accatcatggcccccgggtctaacatatcgcgagtacaatggaagctccagccccccccg
gcccagccccactacctcgacggctttgaggtgctctatcgctctctgctgcccgccagc
tccgactggacagccaagacggtgtccttgcccagcttccagactccggtgggcccctta
aagagaggctacatgtacgagttcaaagtgcgtccctatggcagtagcttgtatgggagg
gagagcaacacccggcacctcagagtccctgaaacagtgcccagtgcctctccactggct
gtgtccataacagtgagccacgagcagaataacaccatctatttgagctgggggcctccg
cctcatgaaacccacaacggcatcatacagggataccaggtgttctgtgtggagtccgag
gggcagcggtaccaaaactggaccgtgaacagcagccaacacaatctcaaaatctccacc
ctcatacccgggcgacgctattggatcaccatagccgctgtcaacggggccggagtggga
atgctgagcgaccctcatggatttgtgatcaacccacaaatgggcaacccccccgcatca
gacggccaaaatcgggatctgtcccaggtcgtggccctgcttaaggacccggtgttgatc
ggcatcattggcgtcctcttgtgttgcgttttgatggttgcggctgtctacctcttcaga
cgccacggcaggacaggctccctgataccagcacggggcagggataaaggtttgcgcaga
ctagccagtgaagatctcatcataaaacacaggatggctgctccagactccccctggatc
tctggaggctggagacctgccttcaaccagaagtatcaggacctatgggcccacgatcag
aaacatccaggactcagaggccccagcctcccggccccctacaaggaaggcagccgcgtg
gactcggccgtgcccattgtgaccgacagctgcggcgtttacggcactttctatgtggac
ttgatggccagcggcctaaagaccttcaacagccctggttgtcgccccaagatgccccat
agtctacctcatcaccaaggagcagagaccatccaaatattcccccagcctgttgctaag
accccgcccctcagcagccgagaggcgctgccatggaaacagggcatacggccccagccc
aagatgggcgtgctcagggagacgtgggagaaaagccatagcaagcaagagctgcatgca
gtgaacagcgtgcccatagtgccaaccaggaaccgggcttgtccatccgcactctacaaa
cagagactcagtcacgtaccatcaggccggctcgagtgcgatcaagtcaccggctgccct
cgcctgctgcattactctgcatcgttacacctagtggacatgctgccccccccaccacca
atgcccatggacgacaccgtggacacatacagcgtcacctcagatgaaggctccagttgg
tctacaaagctcacaggggacatgggctctctccagtcagtgtctgtcgcgtcaggtcac
cgttggcaaccacaagccaccgaccacagctgcccctcctgcactcactgctcttctacg
tcgtactccacgtcaggggacggagaaagggggggcacgctgacgccaaaggatgccgcc
cagtatctggagctttgcccgagacctgagagatgcagcacatgcattcatctgatcatg
ccacctccgtctatcagcagcgcgctgcctgagcagcacccctccccgccccactccttc
tcccccaccctgggctacacgtgtggcccagtacgctctgctcgggcggatggtgactct
gccatcgctgagtgcgagtacctgccaatcggcctgagacacgcccgcctccggagcaca
ccctcctcctgctacagcgaatgggacagctcggcgtggcacacctggagctccgtcaca
gacagcaacatggccagcgctcgcaccagcctcatcagctccgcggacagctgctacacc
gacgacagcgcacacctagcccgcctgctggccgcagcggcggagaccatgagtgcagcc
tctctgtcagacttctctccgcctgcctcccccctcagcgccctgtatccggccttcttt
ggggagggcacgcagctgggcgagctggatccgtgtcctgcgtgggactggagctcggcc
tgggtggaggcgatggaggctcggtgcagggcccaccgtcctggcagcaacagcagaccc
ttcgatgctaaggggacgggacaagcgtttcacacaacttatttagatcaaggagattca
tttcccagtcaagaatag
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