Gasterosteus aculeatus (three-spined stickleback): 120822575
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Entry
120822575 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ and LIM domain protein 4-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120822575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120822575
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120822575
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120822575
NCBI-ProteinID:
XP_040038288
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All DBs
Position
VII:complement(29615551..29644419)
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AA seq
435 aa
AA seq
DB search
MTQTVTLTGPSPWGFRLVGGRDFSTPLTVSRVTPGSKAAQGDLSPGDTILAINGNSTELM
THMEAQNRIKTCTQQLALHISRSGSGDRVWSPTVIEDGKTSPYMEPNSQNFRPITSGYGS
SSRKPSYTPEPQYPQTPQSPQGLQYQQAPQSPQGLQYQQGLQYQQAPQSPQGLQYQQAPQ
YQQAPQSPQAPQYQQAPQSPQGLQYQQAPQSTHLNNGHSRPNNGHSHGYGNGNGHAQYNN
PAGLYHNGSNGDRSLPSKMGGLSLSATHSPEPPTQSPVGGNGFDPHSDVYKMLQDHEEPV
SAPKQSGSFKYLQGILEAEDGGVSPTDRMRSLKSPVMSPVPKLGSPVPGPVPGLQKLPQC
TRCCNGIVGTIVKARDKLYHPGCFTCDDCSVNLKQRGYFFIEDNLYCETHAMARVQPPEG
YDVVAVYPNSKVELV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaccgtgacgctaacgggaccgtctccgtggggcttccggctggtgggagga
cgggacttcagcaccccgctgaccgtctccagggtgacgccgggcagcaaggccgcccaa
ggtgacctgagtccgggcgacaccatcctggccatcaacggcaacagcacggagctcatg
acgcacatggaggctcagaaccgcatcaagacttgcactcagcagctggcgctccacatc
agcaggtcgggatcaggagacagagtgtggtcgccgacggttattgaagacggcaagaca
agcccttacatggagcccaactcccagaatttccgtcccatcaccagcggttatggcagt
tccagtcgcaaaccttcgtacacccctgaaccccagtacccacagacaccccagtccccc
cagggcctccagtaccagcaggctccccagtccccccagggcctccagtaccagcagggc
ctccagtaccagcaggctccccagtccccccagggcctccagtatcagcaggctccccag
taccagcaggctccccagtccccccaggctccccagtaccagcaggctccccagtccccc
cagggcctccagtaccagcaggctccccagtccactcacctgaataacggacactccaga
ccgaacaacggccacagccacggctatgggaacggcaacgggcacgctcagtacaacaac
ccggcaggactttatcataacggcagcaatggagacagatccttgccgagcaagatgggc
ggcttgagcctcagcgccactcacagcccggagccccccactcagtcccccgtggggggg
aatggattcgacccacattcagacgtgtacaagatgctgcaggaccacgaggagcccgtc
tctgctcccaaacagtccggctccttcaagtacctgcaggggatcctcgaggccgaggac
ggaggtgtgtccccaacggaccgaatgaggagcttgaagtctccggtcatgtctcccgtc
cccaaactggggagccccgtccccggccccgtgcccggcctccagaagctgccccagtgc
acccgctgctgtaacggcattgtcggcaccatcgtgaaggccagggacaagctgtaccac
cccggctgcttcacctgcgacgactgcagcgtgaacctcaagcagaggggctacttcttc
atcgaggacaacctgtactgcgagacgcacgccatggcccgcgtccagccccccgagggc
tacgacgtggtcgccgtctacccaaactccaaggtggagctggtctga
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