Gasterosteus aculeatus (three-spined stickleback): 120822608
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Entry
120822608 CDS
T07457
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120822608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120822608
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120822608
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120822608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
120822608
NCBI-ProteinID:
XP_040038330
LinkDB
All DBs
Position
VII:17344436..17367059
Genome browser
AA seq
703 aa
AA seq
DB search
MALDKGAQAIIFDVSDDANAAAELRESDSLLRPVVLVEGKNAEELMGLVNKNEEAKVIIE
VMAEQPKWPHYDVGILLTIVLAILTIVLIFAFRYKCKSNRTWDSVHQQTIQAISRLETTT
YSSQGCSGSQRHRAAWGSASSSNSSPVCAICLEDFQDGQHLRIISCAHEFHKDCVDPWLL
QHRTCPLCMHNIMGTERHPQRTRLQQSSEQSQSFLHPQPYRSARNHLIPQHAIPFAMRSH
YPRGPSGPYPSLGHYTGPSAMEPQTLHFLASRPLSAGCGYHLPGEGPGRPHRIGGNCRTS
THHCTPRRSCHNYRSSCPAQRSASSSRLHHPTSVPPQHRGAPAHNRQDDGSCSGGSYHTE
RSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGP
GSGRPPRRGSLEAGAQARPRSLDSVVNKAGCPEEQPQTVFSHIHYHRHRHHHYEEAEHSQ
GPSRGSDEEQGATAAVAAAPAPLVLERDMPVCPPKHITCQCPKPDPADRPGAGTEGQDLD
PSSPTGPSVRVSSIPLQLQPHCCHQGHGHPTAPLGRVGGCVRDGPSVRFHQSLDLQDDRS
IHIHYGQGPGFCCSPPDLHPALLPVPLILDSGGIEDWPCYAGAHVVWQKRVQQAHSEPQL
LGPGTSMDRPPCRFHHGPAADTDICLYCQTLHHNQGSEEESGV
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggacaaaggagctcaggcaattatctttgatgttagtgatgacgcgaatgct
gctgctgagcttcgggaatcggactcccttctgcgtccagtcgtgctggtggaggggaag
aacgccgaagagttgatgggtctggtcaacaagaacgaggaggccaaagttatcattgag
gtcatggcggagcagcccaaatggccacattatgacgtgggtatcctgctcaccattgtc
ctcgctattctgaccatcgtcctcatctttgctttccgctacaagtgcaagtctaacagg
acttgggactctgtccatcagcagaccatacaggccatcagtcgactggagaccacaaca
tacagctctcagggctgctcggggtcccagcgccaccgagcagcctgggggtcggccagc
agctccaactccagccccgtctgtgccatctgcctggaggacttccaggacgggcagcat
ttgaggatcatctcctgtgcgcatgagttccataaagactgtgtcgacccctggctgctg
cagcaccgcacctgtcccctctgcatgcacaacatcatggggacggagcggcatccccag
aggaccagactccagcagagttcagagcaaagccagagtttcctgcaccctcagccttac
aggagcgcacgcaaccaccttatcccccagcacgccatcccgttcgctatgaggtcccac
tatcctcgcggaccctcgggaccttatccctcgcttggccactacacgggcccgtccgcc
atggaaccccaaacactacatttcctcgccagcaggccgctctctgctggctgcggctac
caccttcccggagagggtcccgggcggccccacaggattggagggaactgccggacctcc
acgcaccactgcaccccccgtcggtcctgccacaactatcgctcatcctgtccagcccag
cgcagtgcttccagctcacgtctgcaccaccccacctccgtcccgccgcagcaccgcggg
gcgccagcccacaataggcaggacgacggcagctgctcggggggcagctaccacacggaa
cgcagtgggtacttggccgatgggccggcaagcgactccagctcggggccctgccacggc
tcctccagcgactctgttctgaactgtaccgacgtgtctctgcagggggtttatggcagc
tggtccaccttccgcagctctctgagcagtgactatgacccatttgtgtattacgggccg
ggctctgggcgccccccccgcaggggcagcctggaggcaggcgcccaggcccggcccagg
tctctggattctgtggtgaacaaagctggctgccccgaagagcagccgcagactgtgttc
agccacatccactaccaccgccacagacaccaccactacgaggaggcggagcacagccag
ggcccaagcagaggctccgacgaggagcagggtgccaccgccgctgttgctgctgcaccg
gctccccttgtccttgaaagagacatgcctgtttgccctcctaagcacatcacctgccag
tgcccaaagcccgaccctgcggatcggcccggcgctgggacagagggccaggaccttgac
cccagcagccctacaggaccttccgtacgtgtatcctccatccctttacagctccagccc
cactgctgccaccagggacacggacaccctacagctcctctcgggcgagtgggtggctgt
gtccgcgatggcccctcggtccgcttccaccagagcctcgatctgcaggacgaccggagc
atccacatccactacggtcagggcccgggcttctgctgctcgcctcctgatctgcacccg
gctttgctccccgtgcccctcatcctagactctggaggcatagaggactggccttgctat
gcaggggcccatgttgtgtggcaaaaacgtgtgcaacaggcccactcagagcctcagctg
ctggggccggggacctctatggacaggccaccctgcaggttccaccacggccctgctgcg
gacacagacatttgtttgtactgccaaacattacaccacaatcagggatcagaagaggag
tctggtgtgtga
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