Gasterosteus aculeatus (three-spined stickleback): 120822735
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Entry
120822735 CDS
T07457
Name
(RefSeq) interferon regulatory factor 1-like isoform X1
KO
K09444
interferon regulatory factor 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
120822735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120822735
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120822735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
120822735
NCBI-ProteinID:
XP_040038531
UniProt:
G3QCI8
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Position
VII:complement(29779457..29782870)
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AA seq
293 aa
AA seq
DB search
MPVERMRMKPWIEKKIESNSISGLSWVDKDKKIFSIPWKHAARHGWEMEKDAVLFKQWAI
HTGKHVEGQECDPKTWKANFRCAMNSLPDIEEVKEKSVHKGHQAVRVFRMLPATPKSRDK
RCKAKETKARRKNSRIKKEEDEEYSDVVMHESMQQSAPSTQENTVDSTVPTDTLVFPLWP
LSEVPDWSCSLEIESAFPNYCSHQFEVSPEHSSDYDYTENIVQICQQLEKDPHCRMGSLD
GTGFLSNEACTSPGSHWSESSSVDELEETPQYLTLGTDMAPATDNIWRSFQQS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggaaaggatgaggatgaagccgtggatcgagaagaagatcgagtccaactcc
atctcgggcctgagctgggtggacaaggataagaagatattctccatcccctggaagcac
gcagctcgccacggctgggagatggagaaggacgccgtcctgttcaaacagtgggccatc
cacacagggaaacacgtggagggccaggagtgtgacccaaagacgtggaaagcaaacttc
cgctgtgcgatgaactcgctgcccgacatcgaggaggtgaaagaaaagagcgtccacaaa
ggccaccaagctgtgcgcgtgttccggatgctgcccgccacccccaaatctagagataaa
cgatgcaaagcaaaggaaacaaaggccaggaggaagaactcaaggatcaagaaggaggaa
gacgaggagtacagcgacgtcgtcatgcacgagtcgatgcagcagagcgccccgtccact
caggagaacacggtggacagcacggtgcccactgacacgctagttttccccctttggccg
ctgtccgaagtccccgactggagttgctcgttggaaatcgagtcggcctttccaaactac
tgcagccaccaattcgaagtgtcccccgagcacagctccgactacgactacaccgagaac
attgtccagatttgtcagcaactagagaaagacccacactgcaggatggggagcttggac
ggcacagggttcctgagcaatgaagcatgcaccagtccaggcagccactggagtgaatcg
tcctcagtcgacgagctagaggagacgccgcagtacctgaccctgggcacggacatggcg
ccggccacggacaacatatggaggagctttcagcagtcgtga
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