Gasterosteus aculeatus (three-spined stickleback): 120822748
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Entry
120822748 CDS
T07457
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat02010
ABC transporters
gat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120822748
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120822748
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gat02000
]
120822748
Transporters [BR:
gat02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
120822748
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
120822748
NCBI-ProteinID:
XP_040038595
UniProt:
A0AAQ4S517
LinkDB
All DBs
Position
VII:complement(5670256..5787079)
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AA seq
2237 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVEVVWPLFLFIILVWVRSTNNPIFKGQCHFPNKA
MPSAGVLPWLQGMVCNINNPCLNEPTPGETPGQVNNFNDSIVSRMLIELQSLLANGSILS
KAQLLAEDLDQWDSVLAKANPAQPVILRSILRDDETFSTHLKENLSLPPTVVQSLMNAEI
KLNPTTGTPRPGDLRSVLCEGTDLDEYIQFSSQAEKEAFTNVSCSRDPQQLINAQQVFQR
NLDGGKVLSEVSSALDLNVTVTLIGKTTQDALPVIEEMTRLQNSMVFEAASSLDFQKDMI
GSISMLLCGKPPDISLSSPRQMDNKTSVSITSNSSDAFCQNLVETLEGTPGLRYIWSTFK
QLLQGKVLYTPDTPAVRLVVKEANSTFNALAMLKELADLWEELGPRVWDTLQNGRQVNAL
RTLLANPLFAAALNQRLDGTGWTGEMLANFLYNGPLEDRPAGMPPYNWRDTFNATSDFLK
LLSKFLGCLNLNKFEAAPTESRLVSRALELLENGTFWAAIVFENLQPNSSGLPAYIKYKI
RMDIEDVEPTNKLKERSWSPGARDNPFKDLRYIWGGFAYLQDMMDHGIIRVQTSKTQPLG
VFAQQMPYPCYVDDGFIQNIGGILPMFLVLAFMYTVCMTIKDLVLDKELRLKEVLRVVGI
QNGALWSVTFTENIVLLTVPCALISVMVKYGNVLQYSDPSVIFVFLLVFCLATITQCFFI
SVFFSKANLAAACGGLIYFVLYLPHVLCYAWRDVMGLQAKVAVSLLSCVAFGYGCENFAK
YEVQGIGIQWYNINSSPEEGDNYTFIVSIIMMLVDAAIYCLLTWYIENVFPGQYGIPRPW
YFPFTASYWCGTASTVAIDPGVLKNSTEHDEYLEKPSPNMKAGVSVRNLVKIYKTGKKLA
VDGLSMDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDILTDMDSIRKYL
GMCPQHNVLFNDLTVEEHIYFYARLKGRSRDEVKIEMDQMLKDVGLPHKRKELAKNLSGG
MQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTHHMDEADI
LGDRIAIISHGKMRCFGSSLFLKKRFGSGYYLTLVRDGTEKMTAQRDGIIHHEAKEEKDF
SPRSSSPDDGIGSQSWNNTEPSADLTALDQIVRRHVPEALFLESVGQEITYILPYGGATD
GTFALLFQVLDLALADLGLTSYGISDTTLEEIFLKVAEDSGVDAEMPTTKEVLVRDCKRG
SGTSKRNSIASVHVKTEQASGRREIKEPFTSKVEDLKRNAVVSGKGSTVITGWELIRRQF
MALFIKRFHHARRSRKGLIAQVVLPAVFVCLSLIFSLIVPPFTEYPSLELQQWMYTPQTN
FYSNDGPDIVEVSNVVETLVNKPGFGTRCMIGNPIANLPCTSSGSDWFTPSVDQSVTDVF
INGNWSMSNPSPPCQCSTPKRTIMLPDCPPAAGGLPPPRRIQNTTETLLDLTRRNVTDFL
VKTFKRSGKTRYGGISVGGVNSQVRLSEAAIRASFRDLKGLFNSSRDNLTDQIFQKAETL
LRKLGTKDNLKVWFNNNAWHGMASFLGVANNAILRGNLPAGQDPSQYGISVYNHPLNLTK
DQLSSAALATSSTDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGVNPAVYWL
ANFAWDMCNYFVPCLIVIFIFLCFQQKAYVSPPNLPALILLLFFYGWAITPMMYPASFIF
SVPSTAYVVLTCINLFIGINGSIATFVLELFDDDNVSRINDIVKNVLLIFPHFCLGRGLI
DMAQNQAMATLFSGFGEDRFKDPLSWKMVGKNICAMSIQGVVMFTITILIQYKFFCKPRL
ISGKSLSSEEEDIDVAQERKRLYEGKAQKDLLRICDLTKVYSRRSPPAVDRLCVGVPAAE
CFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEMRNVHQNMGYCPQFDAIDEL
LTGREHLEFYARLRGVPEKEVAMVAEWGIQKLGLIKYSSKSAGTYSGGNKRKLSTAIALI
GCPGVIFLDEPTTGMDPKARRFLWDCILSIIKEGRSVILTSHSMEECEALCTRMAIMVNG
HFKCLGSIQHLKSRFGDGYTVIVRVGGSPPELKPVEDFVRRSFLGSVLKEKHHNTLQYHL
PYTQGALAHIFSQFTSHQQRLGVEDYSVSQTTLDQVFVNFARLQHGEDDSQAYVNAVDTS
DELPMESLKTSQEAQEV
NT seq
6714 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcacgctgctcctgtggaagaacttcactctgcggaagaga
caaaaggtgcggctggtcgttgaagtggtgtggcctctgttcctcttcatcatcctggtg
tgggtgcggtccaccaacaaccctatttttaaaggccaatgccacttcccgaataaagcc
atgccgtcggctggcgtgcttccctggcttcaaggtatggtgtgcaacatcaacaatccc
tgtttgaacgagccgacgccgggggagacgccgggccaagtcaacaacttcaacgactcc
atagtttcaaggatgttgatagagctgcaaagcctcctagcgaacggatccattctcagc
aaggcgcagttgctggcagaggacctcgaccagtgggattcagtcctggcaaaggcaaac
cctgctcaaccggtgatcctaaggagtattctcagagacgatgaaactttctccacacat
ctaaaagagaatttgtcgctgccaccgacggtggtccaaagcctcatgaatgctgagatt
aaactcaatccaacgacaggcaccccgaggccaggcgacctgaggagcgtcctgtgcgag
gggacggatctggatgagtatatccaatttagcagccaagctgaaaaggaggcttttaca
aatgtcagctgctcccgcgatccacagcagctgattaatgcccagcaagtgttccagcgg
aacctggatggggggaaagtgctttctgaggtatcttcagctttggatctgaatgtaaca
gtcacactgattgggaaaaccactcaagatgcattaccagtgattgaggagatgaccagg
ttgcagaactccatggtcttcgaggctgctagttctttggatttccaaaaggacatgatt
ggcagtatcagtatgctgctttgtggaaagccgcctgacatcagcttaagctcacctaga
cagatggataacaagacgtctgtctccattaccagcaacagttccgatgctttttgtcag
aatcttgtcgaaaccctggagggaacacctggtctgcgctacatttggagcaccttcaag
cagttattgcaggggaaggtcctctacacacctgatacacctgctgttcgcctcgtggtg
aaggaggcaaatagcacattcaatgccctggctatgctaaaggagctggctgatttgtgg
gaggaactcgggccacgcgtctgggacaccctgcaaaatggccggcaagtcaacgcatta
cggactttgctggcaaatccgctgtttgctgctgccctcaaccagcgcctcgacggcacg
ggatggacgggcgagatgctggccaacttcctgtacaacgggcctctagaggaccggccg
gccggcatgcccccttacaactggcgggacaccttcaacgccacctccgacttcctgaag
cttctctcaaagttcctcggttgtttaaacctgaataagtttgaggcggcccccacggaa
agccgtctggtgagcagagccctggagcttctggagaatggtaccttctgggctgccatt
gtctttgaaaacctccagccgaactccagcggcctccctgcgtacatcaaatacaaaatc
cgcatggacattgaggacgtggagcccaccaacaaactcaaagaaaggtcttggtctccc
ggggctcgggacaacccctttaaggacctgcgctatatttggggaggcttcgcctacctg
caggatatgatggaccatggtataatacgagtgcaaacgtcaaagacccagccccttggt
gtttttgcacagcaaatgccgtacccctgctacgtggatgatggcttcatccagaatatt
ggaggcatcctccccatgttcctggtgctggccttcatgtacaccgtgtgcatgaccatc
aaagacctcgtgctggacaaggaactccggctcaaggaagtgctgcgcgtcgttggcatt
cagaacggcgccctgtggtctgtgacgttcacagagaacattgttctgctcacggttccc
tgtgcgctcataagtgtcatggttaagtatggcaatgtgctgcagtacagcgacccctcg
gtgatctttgtcttcctgctggtgttctgcctggccaccatcactcagtgcttcttcatt
agcgtcttcttctctaaggccaatttagcagcggcgtgcggtggcctcatctacttcgtc
ctctacctgccgcacgtcctctgctacgcctggagggacgtcatgggtttacaggccaag
gttgctgtgagtttgctgtcatgtgtggcctttggctacggctgtgagaactttgccaag
tacgaggtgcaaggcatcggcattcagtggtacaacatcaacagcagtccagaagaggga
gataactacaccttcatagtgtccatcatcatgatgctcgttgatgctgcaatttactgc
cttctcacctggtacatcgagaatgtctttccaggccaatatggaatcccgaggccatgg
tacttccctttcactgcatcctactggtgtgggacagcctcaacggtcgccattgaccct
ggcgtgctgaagaactcgaccgaacatgacgagtatctggagaaaccatctcccaatatg
aaagcaggggtctcggtccgcaatctcgttaaaatctacaagactggaaagaagctcgct
gtggacggactgagtatggacttttacgagaatcaaatcacatcttttctcggccacaac
ggagctggaaaaacgaccacaatgtcaattctgacaggactgttcccacccacatcgggg
acagctcttatcaacggatatgacatcctcactgacatggacagcatccgaaagtacttg
ggaatgtgcccgcagcacaatgtcttattcaatgacctcacggtggaggagcacatctac
ttctacgccaggttgaaaggacgcagccgagacgaggtgaaaattgagatggaccagatg
cttaaggatgtcggcttaccacacaaacggaaggagcttgctaagaacttgtcaggtggg
atgcagaggaagctgtctgtggctatagcgtttgtcgggggctcaaaaatcgtcatctta
gacgagcccacagcaggagtggacccttacgcccgccggggtatctgggaactgctgttg
aaatacaaacaaggtcgcaccatcattttgtccacacaccacatggatgaggcagacatc
ttaggcgatcgcatcgccatcatctcccacggaaagatgcgctgcttcggctcctcgctc
ttcctcaagaaacgtttcggcagcggctactacctcactctggtccgggatggcaccgag
aagatgacagctcagcgtgacggtatcatacaccacgaggccaaagaggagaaagacttt
tctccgaggagcagcagcccggacgatggcatcggcagccagagctggaacaacacggag
ccctcagccgacttgacggctctagaccaaatcgtgcgccgccacgtccccgaggcgctc
ttcttagagagcgtcggtcaggagatcacctacatactgccctatggcggagccacagat
gggacctttgccctgctgttccaagtgctcgacctggccttggctgaccttggcctgacg
agctacggcatctctgacacgacgctggaggagatattccttaaagtggctgaagatagc
ggagtggatgcagaaatgccaacaacaaaggaggtgttggtgagagactgcaaaagaggc
tccggtacatccaagcggaacagcatcgccagcgtccacgtgaaaaccgagcaagcctcc
ggacggagagaaataaaggagccattcacaagtaaagtggaagacttaaagaggaacgcc
gtggtcagtgggaagggatccacggtcatcaccgggtgggagctcatccggaggcagttc
atggcgctttttatcaagcgcttccaccacgcccgaaggagccgcaagggactcattgcc
caggtggttctgcccgcggtttttgtgtgcctgtctctgatcttctcgctcatcgtccca
ccattcaccgaatatccgagtctggagctgcaacaatggatgtatacgcctcaaaccaac
ttttacagcaatgatgggccagatatcgttgaggtgtctaatgtggtggaaactttggtg
aacaagcctggctttgggactcgctgcatgattggaaacccaatagcgaacttgccgtgt
acttcgagtggctctgattggttcactccctccgttgaccagtccgtcactgacgtcttc
atcaacgggaactggagcatgtctaacccctcccccccgtgtcagtgcagcacgcctaaa
cggaccatcatgttacccgactgtccacctgctgcaggagggctccctccacctcggagg
atccagaacacaacagaaacattgttggatctaactagacgaaacgttacggacttcttg
gtgaagacatttaaacgctctgggaaaacaaggtacggaggcatctctgtcggaggcgtc
aactcccaagtccgtctgagcgaggcagcaatcagagcttcattcagggatttaaaaggc
ctattcaattcctctcgggataatttgactgaccagatcttccagaaggctgagacgctg
ctgaggaagctgggaaccaaggacaacttaaaggtgtggttcaacaacaacgcctggcat
ggcatggcgtccttcctcggtgtggcgaacaacgccatcctgaggggaaatctgccagcg
ggacaggatcccagccagtatggcatctccgtgtacaatcaccccctcaacctcaccaag
gatcagctctcctctgcggccttggccacgtcctccactgatgtagtggtgtccatctgc
gttatctttgccatgtccttcatcccggccagctttgtcctcttcctcatccaagagagg
gtgaacaaagccaaacatctgcaatttgtcagtggagtgaacccggctgtctactggttg
gccaattttgcctgggacatgtgtaactacttcgtcccatgcctcattgtgattttcatc
ttcctctgcttccaacaaaaagcctatgtctcacctcctaatctgcctgctttgattctg
ctgctctttttttatgggtgggccatcacccccatgatgtacccagcctccttcatcttc
agcgtgcccagcacggcctacgtggtgctgacctgcatcaacctcttcatcggtataaac
ggcagcatcgcgacctttgtgctggagctctttgatgacgacaatgtctcccgcatcaat
gacattgtgaaaaacgtgctgctgatattcccccatttctgtctgggccgaggactcatc
gacatggctcagaaccaggcaatggccaccctcttcagcggttttggggaagaccgtttc
aaggacccactcagctggaaaatggtgggaaagaacatttgtgccatgtccatccaggga
gtcgtcatgtttaccatcaccatcctcatccagtataaatttttctgcaagcccagactt
atttcaggaaagtcattatcttcggaggaggaggatatcgatgttgctcaggaacgcaag
cgcttgtatgaaggcaaggcccagaaagaccttctgaggatctgtgacctcactaaggtg
tactctcggaggagcccccctgctgtggacaggctatgtgtgggagtacctgccgcagag
tgtttcggcttgctgggaatcaacggggccgggaaaaccaccacgttcaagatgctgaca
ggagatatcccagtctccagtggagaggccttcctaaatggatacagcatacgaacagaa
atgaggaacgtgcaccagaacatgggctactgtccccagttcgatgctatcgatgaactg
ctgactggacgggagcatcttgagttttacgccaggctacggggggtcccagaaaaagag
gtcgccatggtggccgagtgggggatccagaaattggggctgatcaaatattccagcaag
tcggcagggacctacagtggaggcaacaaacgcaagctttccacagcgatagccctgatc
ggttgtcctggagtcattttcctggatgaaccaacaactgggatggaccccaaagcccgg
cgcttcctctgggactgcatcctaagcatcatcaaagagggccgatcagtcattctcaca
tcgcacagtatggaggagtgtgaagccctttgcacgcgcatggccatcatggtcaatggt
cacttcaagtgcctcggaagcatccagcatctaaagagcaggtttggtgatggctacacg
gtgattgtgagggttggtggctctccgcctgaattgaagcctgtagaggactttgtccgg
cggtccttcctgggcagcgtcctgaaggagaagcatcacaacacactgcagtaccatctc
ccgtacacacagggggcattggcccacatctttagccagttcaccagtcaccagcagagg
ctgggggtggaggactactccgtgtcccagaccacgctcgatcaggtctttgtgaacttt
gcgaggctccagcacggggaagatgactctcaggcctacgtcaacgcagtggacacttca
gatgagctgccaatggagtctttgaagacctcccaagaagcgcaggaggtttaa
DBGET
integrated database retrieval system
