KEGG   Gasterosteus aculeatus (three-spined stickleback): 120823016
Entry
120823016         CDS       T07457                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03030  DNA replication
gat03410  Base excision repair
gat03420  Nucleotide excision repair
gat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120823016 (rfc3)
   03410 Base excision repair
    120823016 (rfc3)
   03420 Nucleotide excision repair
    120823016 (rfc3)
   03430 Mismatch repair
    120823016 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gat03032]
    120823016 (rfc3)
   03036 Chromosome and associated proteins [BR:gat03036]
    120823016 (rfc3)
   03400 DNA repair and recombination proteins [BR:gat03400]
    120823016 (rfc3)
DNA replication proteins [BR:gat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    120823016 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    120823016 (rfc3)
Chromosome and associated proteins [BR:gat03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    120823016 (rfc3)
DNA repair and recombination proteins [BR:gat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     120823016 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    120823016 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 Rad17 AAA AAA_22 nSTAND6 AAA_11 AAA_16 Sigma54_activ_2 AAA_5 ABC_tran Lysostaphin_N
Other DBs
NCBI-GeneID: 120823016
NCBI-ProteinID: XP_040039004
LinkDB
Position
7:complement(22587948..22590661)
AA seq 356 aa
MSLWVDKYRPTSLGKLDYHKDQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTVVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCSTSTSKVIGPIRSRCL
AIRVPLPSTEEVCGVLTSICKKEGLLLPPELAKQITEKSGRNLRKALLMCEACRVQQYPF
SADQDVPQTDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDIIMKGLVTELL
SNCDGQLKTEVAHMAAYYEHRMQLGSKAIYHLEAFTAKFMAVYKKFMEDGLDGMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttgtgggtggacaaatatcgaccgacttccctcgggaaactcgactatcacaaa
gatcaagcgactcagctgaaaaacctggttcaatgtggcgacttcccccacttgttggtg
tacgggccgtccggcgccgggaagaagacccgcatcatgtgtctgctgagggagctgtac
ggagccggcgtggagaagctgcgcatcgagcaccagaccgtcgtggccccctccaagaag
aaaatagagattaacacaatagccagcaactatcacttggaagtcaacccgagtgatgct
gggaaccaggaccgtgtggtgattcaggagctgattaagaccgtggctcagtcacagcag
atccagtcaagcacccagagagagttcaaagtggtcttgcttacagaggtggacaggctc
accaaggatgcccagcacgctttgcgccggacgatggaaaagtacatgtccacttgccgt
ctcatcctctgctccacctccacctctaaagtcattgggcccattcggagccgttgtctg
gccatcagggttcctctgccgagcacagaagaggtctgcggtgttttgacgtccatctgt
aagaaggagggtctactcctcccaccggaactggccaaacaaatcaccgaaaagtctggt
cgtaacctccgcaaggcccttttgatgtgcgaggcgtgcagagtgcaacagtatccgttc
tcggcagaccaagacgttccgcagacggactgggaggtctacctgagggaaacggccaac
gccatcgtcagccagcagagccctcagaggttgttggaggttcgcgccaggctgtacgag
ctgctcacgcactgcatccctcccgatatcattatgaagggtctggtgaccgagctgctg
agcaactgcgacggtcagctgaagacggaggtggcccacatggcagcttactacgagcac
aggatgcagctgggcagcaaagccatctaccacctcgaggccttcaccgccaagttcatg
gccgtctacaagaagttcatggaggacggcctcgatgggatgatgttttga

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