Gasterosteus aculeatus (three-spined stickleback): 120823396
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Entry
120823396 CDS
T07457
Symbol
grin3bb
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04020
Calcium signaling pathway
gat04080
Neuroactive ligand-receptor interaction
gat04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120823396 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120823396 (grin3bb)
04082 Neuroactive ligand signaling
120823396 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120823396 (grin3bb)
Ion channels [BR:
gat04040
]
Ligand-gated channels
Glutamate (ionotropic)
120823396 (grin3bb)
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Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
120823396
NCBI-ProteinID:
XP_040039247
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Position
VIII:18509331..18534015
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AA seq
1224 aa
AA seq
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MSFTSSSSSSPSWSRTLLTLLLLHLLPPCLLHPQPCHLLAQIGHTVRVGALLPAQRGARV
QVQAALSRAAAAMDRDRDRDRDRDRDPNRERNNFLPYNLSLELVSRQPAAADPESLFRCV
CQGVVVQGVSAVLAFPQSREELLQVDFMASFLEIPFLSVIEHGEPLRTQNRFHLQMAMGV
PESGLSNLLLTVLQRSGWREGTVVLCRGWEEARGLLRLLDSGSWSGASWDGGGAVTWHVR
ALLNLTQSAHDDTQIHDFLSRHFRQNQPSPASVLLFGADPQCAAAVLRSAQDLGLTLPMV
HWVLGQPLSPDALHAIGLPLGLLAYGEVERKPLDFYVSDALQLVTRAIAAATLVRPDLAL
IQNMVNCYDKPNKHEVPSSGQYLSRFLSNTSFSGLTGPVRVHQNRSQVLTSQRFHIWSLR
RDALGQPTWVTVGSWEGGQLKVEDQGVWQGPKPRHRTDGVSGRTRGRWKPGMPVVGNRVR
VVTLVEHPFVFTRDVDEEGSCPAGRYCLDASTNSSDTLEKIFMEVAGGNSSSLPAEHNKC
CYGYCIDLLEKLAEDLGFEYDLYIVGDGKYGAWKGGRWTGLVGDLLNGLADMAVTSFSIN
SARSRVIDFTSPFFSTSLGILVRSKDTAAPIGAFMWPLHWSMWVGIFVALHITALFLTLY
EWKSPYGMTPHGRNRVRVFSYSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLL
VLSSYTANLAAVMVGEKTFEEVSGIHDAKLHHPSRGFRFGTVRESSAEDYMKKSFPEMHE
YMRRFNEPTTPEGVATLKTDPPQLDAFIMDKALLDYEVSIDADCKLATVGKPFAIEGYGI
GLPQNSPLTSNISEFISRYKSEGYMDLLHDKWYKVVPCGNRVFAVTETLQMGISHFSGLF
VLLCVGVGGALLTLAGEHGFYQLALPYIRRRQKLKYWLHTSQKIHRALNMTYEDVKRKQA
EKEKSCDLQKPQPPCGLPAAPAPGASAKWSNEDGKAAAKDARDFKQVQFHLETLNTRRLL
ASIGTSDAKGGGAKSEGQGPAKAGPNSRQCENGGPAVSLASLLHSRSLASSASAASSAQR
NTSVPPPAPPSVAVGVPTAAVAPPPVVVAPPRPGELQELQEQIDQMREKLRTALARRAEI
QTSLAKPVATATNNLSAVTTTTMTTTAAPPSAPPPSAPPPSAPPPIAPVMPFPANTKCVT
TMTDPPHKVLSKVRPFHSRLANQR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcacctcctcctcctcctcctctccctcctggtcccggactctcctcaccttg
ctccttttgcacctcctgccgccgtgcctcctccatccgcagccgtgccacctcctggct
cagatcggacacacggtgcgcgtcggcgcgctcctcccggcgcagcggggggctcgcgtt
caggtccaggcggcgctgagccgcgcggcggccgcgatggaccgggaccgggaccgggac
agggaccgggacagggacccgaaccgggagcggaacaactttcttccctacaacttgagc
ctggagcttgtttcccgccagccggccgccgcggacccggagtccctgttccggtgcgtg
tgtcagggcgtggtggtgcaaggagtctccgccgtgctggccttcccgcagagccgcgag
gagctgctacaggtggacttcatggcctcgttcctggagatcccgttcctcagcgtcatt
gagcacggagagccgctccgcacgcagaaccggttccacctgcagatggcgatgggggtt
ccagagtccggtctgtccaacctgctgctgacggttctgcagcggtccggttggagggag
ggcaccgtggttctgtgccggggctgggaggaggctcggggtctcctgcggctgctggac
agcggcagctggagcggtgcatcgtgggacggcgggggcgcagtcacctggcacgtgcgc
gccctccttaacctgacgcagtcggcgcacgacgacactcagatccacgacttcctgtcg
cggcacttccgacagaaccagccctcgcccgcatcggtgctgctgttcggagccgacccg
cagtgcgcggcggcggtgctgcgcagcgctcaggacctgggcctcaccttacccatggtg
cactgggtgctgggccagccactcagccctgacgcgctgcacgccatcgggctgcccctc
ggcctgctggcctacggggaggtggagaggaaaccgctcgacttctacgtcagcgacgcc
ctgcagctcgtcaccagggccatcgccgcggcgacgttggtacggccggacctggcgctg
atccagaacatggtgaactgctacgacaaacccaacaaacacgaggtgccgtcctccgga
cagtacctgtccaggttcctctccaacacgtctttctccggtctcacaggtcccgtccga
gtccaccagaacaggtctcaggtcctcacctcgcagcgtttccacatctggagcttgcga
cgggacgcgctgggtcagcccacctgggtgacggtgggcagttgggagggaggccagctc
aaggtggaggaccagggagtctggcagggccccaaacctcgccacaggaccgacggcgtg
agtgggaggacgaggggccgctggaagccggggatgccggtggtggggaatcgggttcgg
gtggtgaccctggtggaacatcctttcgttttcacgcgggacgtggacgaagaaggaagc
tgcccggccgggcgctactgcctggacgccagcaccaacagctcggatactttggagaaa
atcttcatggaggtggccgggggcaacagcagctccctgcccgcagagcacaacaagtgt
tgctacggatactgcatcgacctgctggagaaactggccgaggacctgggcttcgagtac
gacctttacatcgtgggagacgggaagtacggggcgtggaaggggggccgctggaccggg
ctggtgggagatcttctgaacgggctggcagacatggccgtgacctccttcagtattaac
tccgcccggagccgggtgatcgacttcacctcgcccttcttctcgaccagcctgggcatc
ctggtgcgcagtaaggacactgcggcccccatcggagccttcatgtggcccctgcactgg
tccatgtgggtgggcatcttcgtggcgctgcacatcaccgcccttttccttacgctttac
gagtggaagagtccgtatggcatgacgcctcacggacgcaacagggtgagggtgttttca
tactcgtctgctctcaacctgtgctacgccattctgttcggacgcaccgtctcctccaag
acgccaaagtgttggacgggtcggtttctgatgaacctgtgggccatcttctgcctgctg
gtgctgtccagctacaccgccaacctcgccgcagtgatggtgggggagaagacttttgag
gaggtgtcaggaatccacgatgccaagctgcatcatccgtcgcggggttttcgtttcggg
acggtgagggagagcagtgcagaggattacatgaagaagagttttccagagatgcacgaa
tacatgcggcgcttcaacgagccaacaacacccgaaggagtggccactctcaagacagat
cctcctcagcttgacgccttcatcatggacaaagctctcctggattacgaggtttccatc
gacgccgactgtaaacttgcaacagttgggaaaccgtttgctatcgaaggttatggcatc
ggtctgccccagaactcccccctgacctccaacatctcagaattcatcagcaggtacaaa
tcggaaggctacatggacctgctgcacgacaagtggtacaaagtggttccctgtggaaac
cgtgtgttcgccgtcacagagacccttcagatgggcatcagtcacttttcggggctcttt
gtgttgctgtgcgtcggcgtgggcggagccctgctgacgctggcaggcgaacacggtttc
taccagctcgccctgccgtacatccgccgccgacagaagctcaagtactggctgcacacc
tcgcagaaaatccaccgagctctgaatatgacgtatgaagacgtaaagaggaagcaagct
gaaaaagagaaaagctgtgacctccagaagcctcagcccccctgcggcctccccgctgcg
ccggcccccggggcctcggccaagtggagcaacgaggacggtaaggccgccgctaaggac
gcccgagacttcaaacaagtccaattccacctggagaccctcaacacccgccgcctgctc
gctagcatcggtacctccgacgccaaggggggaggggccaaatccgaagggcaggggccg
gcgaaggcggggcctaacagccggcagtgtgagaacggagggccggcggtgtcactggcc
agcctcctccactcacgatctttggcatcctccgcttcggccgcctcctccgcccaacgc
aatacctctgtgcctccccctgcgcctccctctgtcgccgtcggagtccccaccgcggcc
gttgcccctccccccgtggtggttgctccaccccggcccggtgagctgcaggagctacag
gagcagatcgaccagatgagggagaagctgaggacggctctggccaggagggcagagatc
cagacgagcctggccaaacccgtcgccacggcaaccaacaacctgagtgcagttaccaca
accacgatgacaacaaccgcagcgccgcccagcgccccgccccccagcgccccgcccccc
agcgccccgccccctattgccccagtaatgcctttccctgccaacactaagtgcgtgacg
accatgacggacccacctcacaaagtcctgtccaaagtccggcccttccacagcagactg
gccaatcagaggtga
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