Gasterosteus aculeatus (three-spined stickleback): 120823418
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Entry
120823418 CDS
T07457
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03030
DNA replication
gat03410
Base excision repair
gat03420
Nucleotide excision repair
gat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120823418 (rfc4)
03410 Base excision repair
120823418 (rfc4)
03420 Nucleotide excision repair
120823418 (rfc4)
03430 Mismatch repair
120823418 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gat03032
]
120823418 (rfc4)
03036 Chromosome and associated proteins [BR:
gat03036
]
120823418 (rfc4)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120823418 (rfc4)
DNA replication proteins [BR:
gat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120823418 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
120823418 (rfc4)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120823418 (rfc4)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120823418 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
120823418 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_11
AAA_30
DUF815
KH_DUF2096_C
AAA_24
AAA_14
SLFN-g3_helicase
Mg_chelatase
Gp44_lid
RuvB_N
AAA_19
AAA_5
Cdc6_lid
ResIII
7TMR-HDED
AAA_7
Motif
Other DBs
NCBI-GeneID:
120823418
NCBI-ProteinID:
XP_040039297
LinkDB
All DBs
Position
VIII:881798..889716
Genome browser
AA seq
402 aa
AA seq
DB search
MSSESEREKRRCYRHMSTSGLHSARCDSGVSAFETGNSALGTGAMQAFLKGATLQSTRPQ
KDKAAAGPSSEKRAKPIPWVEKYRPKCVDEVAFQDEVVAVLKKSLEGADLPNLLFYGPPG
TGKTSTILAAARELYGPHLYRQRVLELNASDERGIQVVREKVKNFAQLTAAGTRPDGKPC
PPFKIIILDEADSMTGPAQAALRRTMEKESRTTRFCLICNYISRIIEPLTSRCSKFRFKP
LANKIQEERLLEICEKENLKYTKESIAALVGVSDGDLRKAITFLQSAARLNMDKEITERA
VIDIAGVVPPKMIDNLLHICFTGTFEKLEVAVRNMVDEGYAATQILSQLHESIIERQLSD
KQKSAITEKMAVVGKCLTDGADEYLQMLSLCSLILQQASHNN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgagtcagagcgggaaaagcggcgctgctacagacacatgtcaacaagcgga
ctccactcagcccggtgtgacagcggcgtgtcggccttcgaaaccgggaactctgctctg
ggaacaggagccatgcaggccttcctgaaaggagcgacgcttcagtccaccagacctcag
aaagacaaggcggcagcagggcccagttcagagaagagagctaagcccattccctgggta
gaaaagtacaggccaaagtgtgttgatgaggtggccttccaggacgaggtggtagccgtg
ctgaagaagtctctggaaggagctgatcttcccaacctgctcttctacggccctcctggg
acggggaagacctccaccatcctggctgccgccagagaactttacggcccccacctgtac
agacagagggtgctggagctcaacgcctccgacgagcgaggcatccaggtggtccgggag
aaggtgaagaactttgctcagctcaccgcggccgggactcgcccagatggcaagccgtgt
cctccttttaagatcatcatcctggacgaggcggactccatgacgggaccggctcaggcc
gctctaaggcggaccatggagaaggagtcccgcaccacacgcttctgcctcatctgcaac
tacatcagcaggattattgagccgctgacctccagatgttccaagtttcgcttcaaacct
ctggccaataagatccaagaggagcgcctgttggagatctgtgagaaggagaacctcaag
tacaccaaagagagcatagcagcgttggtgggcgtgtcggacggagacctgcggaaagcc
attaccttcctccagagcgctgcgcgcctcaacatggacaaggagatcacagagagagcc
gtcattgacatagccggggtggtccctcccaagatgatcgacaacctgctccacatctgc
ttcacgggcacgtttgagaagctcgaggtggccgtcaggaacatggtggatgaaggctat
gcagccacacagatcctgagtcagctccacgagtccatcatagagcggcagctgagcgac
aagcagaagtcggccatcacagagaagatggcggtggtggggaagtgcctgaccgacggg
gcagacgagtacctgcagatgttgagtctgtgttcactcatcttgcagcaggcgtcccac
aacaactag
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integrated database retrieval system
