Gasterosteus aculeatus (three-spined stickleback): 120823443
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Entry
120823443 CDS
T07457
Symbol
cyfip1
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04810
Regulation of actin cytoskeleton
gat05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120823443 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120823443 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120823443 (cyfip1)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120823443 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
120823443 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
MauJ
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
120823443
NCBI-ProteinID:
XP_040039352
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All DBs
Position
8:complement(19142711..19162888)
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AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSVMFQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNVMLEEGQEYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHTERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYDELLAD
IVNLCVEYYENKMYLTPNEKHMLLKVMGFGLYLMDGNSSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWTCTSISSSPQYNICEQMLQIRDDHMRFI
SELARYSNSEVVTGSGRQEAQKTDSEYRKLFDLSLQGIQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFAQVTLRDPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGREPHNDPALRGEKDPK
GGFDITVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSGLEGPTILDIERFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRADCKNQGANIPWPASNRYETLLKQRHVQLLGRSIDLNRLITQRISAALYKSL
ELAINRFESEDLTSIMELEGLLDINRMTHKLLSKFLTLDSMDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSPEFQKDKPPHAQPQXLYGSKTLNLAYSS
IFSTYKNFVGPPHIKVMCRLLGYQGIAVVMEELLKVVKSLLQGTIMQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAMLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIISLLGQHRRFDVLDFSYHLLKVQKHDGKDEVIKSVP
LKKMVERIRKFQVLNNEIFAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacagtgaccttagaagatgccctctccaacgtggacctgctggaggagctg
ccgctccccgaccagcagccctgcatcgagccccttccctcctccgtcatgttccagccc
aacttcaacaccaactttgaggaccgaaatgcgttcgtcaccggcatcgccagatacatc
gagcaggccacggtccactccagcatgaacgtgatgttggaggaggggcaggagtacgcc
atcatgctgtacacctggaggagctgctcacgagcaataccacaggtgaaatgcaacgag
cagcccaaccgagtggagatctacgagaagacggtggaggttctggagccagaagtcacc
aagctcatgaacttcatgtacttccagcgcacggccattgaccgtttctgcggtgaggtc
cggcgtctctgtcacacggagcgcaggaaggactttgtctcggaggcgtacctgctgacc
ctcgggaagttcatcaacatgttcgccgtgctggacgagctgaagaacatgaagtgcagc
gtgaagaacgaccactctgcctacaaacgagcggctcagttcctcagaaagatgtctgag
ccgtcatccatccaggagtcccagaacctgtccatgttcctggcaaaccacaacaagatc
acccagtctctgcagcagcagctggaggtgattaacggatacgatgagctgctggccgac
atcgtcaacctttgtgttgagtactacgagaacaagatgtacctcactcccaacgagaaa
cacatgctgctcaaagtgatggggttcggcttgtacctcatggacgggaacagcagcaac
atctacaaactcgacgctaagaagaggatcaacctcaccaagatcgacaagttcttcaag
cagctgcaggtggtccctctgttcggggacatgcagatcgagttgtcccgctacatcaag
acaagcgctcacttcgaggagaacaaatccaggtggacgtgcacgtccatttccagcagc
cctcagtacaacatctgcgagcagatgcttcagatccgcgacgatcacatgcgcttcatc
tcggagctcgctcgctacagcaacagcgaggtggtgaccgggtcggggcgtcaggaggcc
cagaagacggactctgagtacaggaagctgttcgacttgtcgctgcagggcatccagctg
ctgtcccagtggagcgctcacgtcatggaagtgtactcctggaaactggttcatccgacc
gacaaatactccaacaaggagtgtcccgacaacgccgaggagtacgagagagccaccaga
tacaactacaccagcgaggagaagttcgccttggtggaggtgatggcgatgataaagggc
ctgcaggtgctgatggggcgcatggagagcgtgttcaaccacgccatccggcacaccatc
tactcggctctgcaggacttcgctcaggtgacgctgcgcgacccgctgcgacaggccatc
aagaagaagaagaacgtcatccagagcgtcctgcaggccatcaggaagacggtgtgcgac
tgggaggctggccgagagccgcacaacgacccggcgctccgcggagaaaaggatccaaag
ggcggctttgacatcacggtcccgcggcgagcagtcggcccctccagcacgcagctctac
atggtgaggaccatgctggagtctctcatcgcagacaagagtggctccaagaagactctg
cgcagcggcctggaaggccccaccatcctggacatcgagcgcttccaccgcgagtccttc
ttctacacgcacctgctgaacttcagtgagaccttgcagcagtgttgcgatctctctcag
ctctggttcagggagttcttcctggaactcacgatgggccgcaggatccagttccccatc
gagatgtccatgccctggatcctcacggaccacatcctggagaccaaggaggcctccatg
atggagtacgtgctgtatcctctggatctgtacaacgacagcgcgcactacgcgctcacc
aaattcaagaagcagttcctgtacgatgaaatagaagctgaggtgaacttgtgcttcgac
cagttcgtctataaactggctgatcagatatttgcgtactacaagattctagcaggaagt
ctcctgctggacaaacgtctgagggccgactgtaagaaccaaggcgccaacatcccgtgg
cccgcctccaaccgctacgagacgctgctgaagcagcgccacgtccagctcctcggccgc
tccatcgacctgaacaggctcatcacgcagaggatctccgccgccctctacaagtctctg
gagctcgccatcaaccgcttcgagagcgaggacctcacctccatcatggagctggagggc
ctcctggacatcaaccgcatgactcacaagctcctcagtaagttcctgacgctggacagc
atggacgccatgttccgcgaggccaaccacaacgtgtcggcgccctacggccggatcacc
ctgcacgtcttctgggagctcaactacgacttcctgcccaactactgctacaacggctcc
accaacaggttcgtgcgcacggtgctgcccttctctccagagttccagaaggacaagccg
ccccacgcccagccgcagtaactgtacgggtcaaagaccttgaacctggcgtacagcagc
atattcagcacctacaagaactttgtgggccccccccacatcaaggtcatgtgccgcctg
ctgggctaccagggcatcgccgtggtgatggaggagctgctgaaggtggtcaaaagcctg
cttcagggaaccatcatgcagtacgtgaagaccctgatggaggtgatgcccaagatctgc
agactcccccgtcacgagtacggctcgccaggtatcctggagttctttcaccaccagctg
aaggacatcgtggagtacgccgagctgaagacggtgtgcttccagaacctgagggaggtg
ggcaacgccatgctgttctgtctgctgagcgagcagagtctgtcgcaggaagaggtgtgt
gacctgctgcacgccgcgcccttccagaacatccttccaagagtccacgtcaaagagggg
gagcggctggacgccaagatgaagcgcctggaggccaaatacaccgccctgcacctggtc
cccctgatcgagcgtcttgggactcctcagcaaatcgccatcgctcgcgagggcgacctg
ctgaccaaagagaggctgtgctgcggcctgtccatgttcgaggtcatcctgacgcgcgtg
cgaggcttcctggacgaccccatctggcggggcccgttgcccagcaacggcgtgatgcac
gtggacgagtgcgtggagttccaccgtctgtggagcgccatgcagtttgtgtactgcatc
cctgtgggagcccatgagttcacagtggagcagtgcttcggggacggcctccactgggcc
ggctgcatgatcatctccctgctgggtcagcacaggcgcttcgacgtcctggacttcagc
taccacctcctgaaggtgcagaaacacgacggcaaggacgaggtcatcaagagcgtgccc
ctgaagaagatggtcgagagaatccgcaaattccaagtcctcaacaacgagatcttcgcc
atcctgaacaagtacctcaagtccggagacggagagaacatgccggtggaacacgtccgc
tgcttccagcctccgatccaccagtcgctcgccagcagctga
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