KEGG   Gasterosteus aculeatus (three-spined stickleback): 120823488
Entry
120823488         CDS       T07457                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:gat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gat03036]
    120823488 (kdm4b)
Enzymes [BR:gat01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     120823488 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     120823488 (kdm4b)
Chromosome and associated proteins [BR:gat03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120823488 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN DUF4537 PHD 53-BP1_Tudor DUF7141 DUF61 SLX1_C
Other DBs
NCBI-GeneID: 120823488
NCBI-ProteinID: XP_040039451
UniProt: A0AAQ4PCD4
LinkDB
Position
VIII:11060903..11096910
AA seq 1195 aa
MATDMPKDTVPRPYPAPGPPHDTAPAPTHAPGAFSAQDQIPVDVPAVTEIQDTAMTPEPD
APPDLTPALHADAEPVLVPGTELPPFPLLPVSAKNASCKIMTFRPTVEEFKDFAKYIVYM
ETQGAHRAGLAKVIPPEGWKPRRSYDTIDDMVIPAPIMQVVTGQSGLFTQYNIQKKSMTV
NDYRKLANSKKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDEDIQEWNIGHLN
TLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQSKSWYAVPPE
HGKRLERLAKGFFPGSSQGCDAFLRHKMTLISPSILKKYGIPFDRITQNEGEFMVTFPYG
YHAGFNHGFNCAESTNFATLRWVDYGKMATQCTCRKDMVKISMDVFVRCLQPDRYELWKQ
GKDSTVLDHLKATGLSCPELERWREHRVSHRANVLRRALQKVKQVRRLKLEEVKVLAQEG
IELNAAEYQLQVEQREAQRRQAREERLAKEAIMTLEAMEREEQEAAEAAARVAEAPAAEE
AEVKPQNPSENIQKKRQKKSKKLSNIYNTMTAFEEVFDQFATTSTKTVGQPAEENLLTPR
QSDLPLDNKRDVIAAQAFSKVKMPTEVKKSRRHPLSKPPMRSPLSILKQDPTSDKELSSP
MPLDSDMKKQEHLWQNHSPNFLAEKAFNAAVAALQPHCAVCLLFCPYTKPHKDIFVANET
KRGSLPRLTRPLVPEMCFSVGAGNTEPPPTNYHIGEDGTSPLLCCSSCHMQVHASCYGVK
PDSVCDSWMCSRCAAGAWTVECCLCNLRGGALKTTTDNRWVHVICAIAVAEARFVNAIER
EPVDVSAVPETRKNLKCVFCHGKTANQNRGACIQCSHDNCATSFHVTCAQLAGVVMTPAD
WPYVVSVTCQKHKRGSSKPRTTSKGPQSPNLSQRVIGRNSDGWYYHCTIIGMATQTYYEV
NFDDGSYCDNLHPENILSHDCLRTGPPEVGELIVVSTAEGQVVNASFVRQHTHKFYQVEF
QDQSQLILKHSEIHQLEQDLPKRVRARLAIPVPLEEVSSADEAQAAKRRRLPSDSSPVAG
PSMGMSNQPACSLAAAPVGVLAAEDHSIHTLPNSQPPARPSITSRDVVGPPDGIQMDAET
AMDMSVALTDALTESSLASDPTPAPQSTPFSVDVSYMESIFHSHFAQDSSQGPPY
NT seq 3588 nt   +upstreamnt  +downstreamnt
atggcaaccgacatgcccaaggacactgtgccgaggccttatcccgccccgggcccaccc
catgacaccgccccagctcccactcacgctcccggggctttttcagcccaagaccagatt
cccgtcgatgtgccggccgtaactgaaatccaagacacagcgatgaccccagagcctgat
gctcccccggatctcacccctgctcttcatgcagatgctgaaccggtccttgttccgggc
actgagcttcccccgttccctctgctgccagtcagcgctaagaacgccagctgcaagatc
atgaccttccggcccaccgtggaggagttcaaagacttcgcaaaatacatagtctacatg
gagactcaaggagctcaccgtgctggcctggctaaggtgattcccccggagggctggaag
ccacggaggtcctatgacaccatcgacgacatggtcattccagctcccatcatgcaggtg
gtgaccgggcagtcgggtctattcacccaatacaacattcagaaaaagtctatgaccgta
aacgattaccgcaagctggccaacagcaagaagtactgcactcctcggcacaaagacttt
gacgacctagagaggaagtactggaagaacctgacatttgtgtcgcccatttatggtgct
gatgtcagtggctcaatctatgatgaggacattcaagagtggaacattggccatctcaac
acactgctggatatggtggagcaggagtgtggcatcgtcatcgagggtgtcaacactccc
tacctctactttggcatgtggaagaccacatttgcctggcacaccgaggacatggacctc
tacagcatcaactacctgcactttgggcagtcaaagtcctggtatgccgtcccaccggaa
catggcaagaggctggagaggctggccaaaggcttcttcccgggcagctcccaaggctgt
gacgccttcctccgccacaagatgacgctgatatctccttccattctgaagaaatatggc
attccctttgacaggattactcagaatgaaggggagtttatggtgacctttccctacggc
taccatgctggcttcaaccatggcttcaactgcgcagagtcaactaactttgccaccctg
cgctgggtcgactacggcaaaatggctacccagtgtacctgtcgcaaagacatggtgaag
atttccatggacgtgtttgtgcgctgcctgcagccggatcgctacgagctgtggaagcag
ggcaaagacagcaccgtgttggaccaccttaaggccactgggctcagctgccccgaacta
gagcgctggcgggagcatcgtgtgagccacagagccaatgtcctgagacgggccctgcag
aaggtgaagcaagtccgtcggctaaagctggaggaggtgaaggtgctggcgcaggaaggc
attgagttaaatgccgccgagtaccaacttcaggtggagcagcgtgaggcccaacggagg
caagcgagagaggagcgcctagccaaggaggccataatgaccctggaggccatggagcga
gaggagcaggaggctgccgaggctgctgcccgagtcgcagaagctccagccgcagaggaa
gccgaagtcaaaccacagaacccgtcggagaacatacagaaaaagaggcaaaagaagtcc
aagaaattgtcaaatatctacaacaccatgactgcgtttgaggaagtctttgaccagttt
gctacaaccagcaccaagacggtcggtcaaccagcggaggagaaccttcttactccgaga
cagagtgatctcccactagacaacaagcgagatgtgattgccgctcaggccttctccaag
gtaaaaatgccaaccgaggtcaaaaagagtcggcgtcaccccctcagcaagccccccatg
cgctcccctctgtccatcctcaagcaagacccgaccagtgacaaagagctgtcctccccc
atgcccctggacagtgacatgaaaaaacaggagcacctgtggcagaatcactcgcccaac
ttcctggcggagaaggcctttaatgcggcagtggcagcactccagccccactgcgctgtc
tgtttactcttctgtccctacacaaagcctcacaaggacatttttgtcgcaaatgaaacc
aagcgcggctcccttccccgcctgactcgtcccctggtcccagagatgtgcttcagcgtt
ggtgcaggcaacactgagcctccacccaccaactatcacattggagaagatggaaccagt
ccgctcctctgctgttcgtcctgccacatgcaggttcatgccagctgttacggtgtgaag
ccagactccgtctgtgattcctggatgtgctccaggtgtgcagcaggagcctggacagtg
gagtgttgcctctgcaacttgcggggaggagctttgaagactaccacggacaaccgatgg
gtgcatgtcatctgtgccatcgctgtagctgaagctcgcttcgtcaatgccattgagagg
gagcccgtggatgtcagtgccgttccagagacgcgcaagaatctgaagtgtgtgttctgc
cacggaaagactgccaatcagaaccgcggcgcctgcatccagtgctcacacgacaactgt
gccacgtccttccacgtcacctgcgcccaactcgccggagttgtcatgacaccggccgac
tggccgtacgtggtgtccgtcacctgtcaaaagcataaaaggggctcctccaagccgagg
acgacatccaaaggcccgcagagtccgaacctcagccagagggtgatcgggcgcaacagt
gacggctggtactaccactgcaccatcatcggcatggcaacgcagacatactacgaggtc
aactttgacgatggctcgtattgtgacaacctgcacccagagaatatcttgagtcatgac
tgcttgcgtaccggccctcctgaggtgggggagttgattgtggtcagcacagccgagggt
caggttgtcaatgcttcctttgtcagacagcacacccacaagttctaccaggttgagttt
caggatcagagccagttgatactaaaacactcagagatccatcagctggaacaggatctg
ccaaagagggtcagggcaagactggccatacctgtgccgctggaggaggtctcatcagcg
gatgaagcccaagcagcaaaacgccggcgcctgccctcagactcctccccagtggctgga
ccctccatggggatgtcaaatcaacccgcctgctccctcgccgcagcgccagtaggagtg
ctcgcagcagaggatcacagtattcacacactgccgaactcacaacctccggcccggccc
agcattacctcgcgtgacgtcgtcggcccacccgatggtattcagatggacgccgagacg
gcaatggacatgagcgtcgccctcaccgatgctctaaccgagtcatccctggcctcggac
cccacgccggcaccacagtcgacgcctttttcagtcgacgtctcctacatggagagcatc
ttccattcacatttcgctcaggacagcagtcaaggacccccgtattaa

DBGET integrated database retrieval system