Gasterosteus aculeatus (three-spined stickleback): 120823509
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Entry
120823509 CDS
T07457
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120823509 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120823509 (arhgef18b)
Membrane trafficking [BR:
gat04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120823509 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
PH_13
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
120823509
NCBI-ProteinID:
XP_040039481
UniProt:
A0AAQ4NS84
LinkDB
All DBs
Position
VIII:complement(14341755..14375764)
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AA seq
1681 aa
AA seq
DB search
MADSSLNNSWPSFSKLWMKRWSFKRASECKPCSQPCGSPSAQLGVQPHGGTGSSSSSSSL
SPASVTEEVFFGSINKDQDACSVVSDYDFPCAEVRSSLEDLLGLARDSEYLKDLEGGIPA
AQSTSSTVTIVPRSHTPSVGLQVALNSKLGPALLQPSQTSLSTHSTQVYAASSPTFYIHP
AVEPHQNFVVSQLNPKLLPGCIIDSGDSSGPAVGLSLTFNLSGLLGSMETAEGITGSEEV
NEQPTMESDGESDLDSCPILVRSMSTSRRHSWGVPVSPINLGRRLSLDTTAMDSDGERED
DEEGEKGLFQPSLPQTSGCTACPGEKTDGAGPMVPCPRARLTSMAVGARRRHLYSRSEIL
ATDECSRAAHISRVVQTSKQAATAAGAEEFDPEENLHSTEGHSHTLMVQKVLQELKLYHG
AKERNNRSDSKVSGNVTWYEFLSHDPEEEGEDRAEKLEKGTKVKRTLSSLRNRVTGSFNK
DKGKSREKEQQKERGKEKEREAKEKVCGSSSRNGHYLVPGAFSSCASCSLCSKTLQRKHG
LQCMNCAVNVHKNCKSLLGECTSSRNKRDSSHQSGSLNRALKDREREHSGQASSQPLDGH
PGFHSTPGMTVSLWGPSSQSATAASVLGHSLRHHNSSGFLPGEMDETDAVRPKRCNEDAI
SLAPSTTESIIVEDAHYAAVRADLESDAQDLEVESWSLAVDQQYVKKHSKETVKRQDVIY
ELMQTEMHHVRTLKIMLRVYVQELKDKLQMDAGKLDCLFPQLENLLELHTHFLSRLKERQ
RENFVSPNDRNYAINRLADILISQFSGEIGERMKESYGDFCSHHTEAVSYYKEQLHNNKK
FQNLIRKINNLSIVRRLGVSECILLVTQRITKYPVLVERILHNTEAGTDEHEDLTRALGL
IKDTIVQVDTLVNLHEKNSRLRDINIKMEPKAQGKIKDGRVFRREDLAQGRRRLLHEGTV
NWKAASGRLKDILAVLLSDVLLLLQEKDQRYVFAAVDNKPSVISLQKLIVREVAHEEKAM
FLICASSNEPEMYEIHTAGKEERNTWMTHIRQAVESCPHTEERLFSEEEEARASRFKEFQ
ERLSQKDAVVVQALTEKLQLFADMAASVAGLEDTASRSRLLLRGDASDLQQGEALLKGAL
TEVENLQNLLQSGVREDSPTSRLDEGSGSGLLPRRADTFGGYDSSPAIISKNGSVKKKFS
AETRSRDRSQRASSDPQLKDLCGSHALEQTVDESCCSPARWNRIWSNSFPEAEFFDRVLM
LSQRLYSLQAIVSQQDSHIELQRASLTERAALPGRHRGNVLLEQEKQRTLALQREELASF
HKLQAQHRQEQHRWERERERHRQQVEATEARLRQREEECRRLEEHLAEERRELESQRETY
QQDLERLRESTKAVEKEKERLEHQKIKRKTIEVASLSDSLNGELLLSSGLNTFPSVSDLP
LPQKPLVRASLSVAPADYLERPKVMLRREAGSSTLPAKAVPTHLLSTTNQQHKLVGVQQQ
IPTKLAAGGGKGKGGKIGKASHRTDSTASVDMKQMLPLKLSARDDNTLKAKRSVSPQQQL
SLSPPPQPLPLHHHADPLSPADHAGPDAQSPSSVSIAHPQSLQKPPMPPAQSHAQPPAQP
PPTIPPNSQTSGCLHLQPRGLSPNAPARVQVNVHGLSHSHSMPPAYKTAAEDLNKEDVIF
F
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcttccctcaacaactcctggccctccttctccaagctctggatgaagaga
tggtccttcaagcgagcatctgagtgcaagccgtgtagtcagccctgtgggtctcccagt
gcacagctcggtgtccagcctcacggtggtacaggctcctcctcctcctcctcctcactg
tctcctgcctcggtcactgaggaggtcttctttgggagcatcaataaagatcaggatgcg
tgttcagtagtcagcgactatgatttcccctgtgccgaggtgagaagcagtctggaggac
ttgctgggcctcgccagagactccgagtacttaaaagacctggaaggagggataccggct
gcacagtcgacttcatccacggtgaccatagtcccgcggagccacaccccaagtgttggc
ctccaggtagccctaaactcaaagttaggtcctgctctcctccaacccagccagacgtct
ttgagcacacactccactcaggtctatgcagcatcttcccccaccttctatattcaccct
gcagtggaaccccatcaaaactttgtggtcagccagctcaaccccaaattgttgccaggt
tgtatcattgacagcggcgattcctcaggccccgccgtggggctcagcttgacatttaat
ctgagtggactgttgggatcaatggaaaccgccgaaggcataacgggatcagaagaagta
aacgagcaacccaccatggagtcagacggagagtcggacctggacagctgtcccattctg
gtcagatccatgtcaacgtctaggaggcacagctggggtgtccccgtgtcccccatcaac
ctggggaggagactgagtctggataccacggccatggacagtgatggagagagagaggat
gatgaagagggagaaaagggtctcttccagccctccctgccgcagacctccggctgcaca
gcgtgtccaggagagaagacagatggcgccgggccgatggtcccctgtccgagagccaga
ctcaccagcatggccgttggcgcgcgtagaaggcatctgtactcccgctcagagatcctc
gccacagatgaatgttcccgtgctgcgcacatttcccgtgttgtgcagacatccaaacag
gccgcaacggcagcaggagcggaggagtttgaccctgaggaaaacttacactctactgaa
ggacacagccatacgctgatggtacagaaagttctgcaggagctaaagctgtaccatgga
gcgaaggagaggaacaaccgatcggacagtaaagtttcaggaaatgtcacttggtacgag
ttcctctcccatgaccctgaagaggaaggggaggatcgtgcagagaagttggagaaaggc
accaaggtgaagaggactctcagctcgctgaggaacagggtgactggctccttcaataaa
gataagggtaagagccgagaaaaagagcagcagaaagagagggggaaggagaaggagcgg
gaggctaaagaaaaagtgtgtggcagtagcagcagaaatgggcattatttggtgccgggg
gctttctccagctgtgcctcctgctcactgtgcagcaagaccctgcagagaaagcatggc
ctgcaatgcatgaattgtgccgtgaacgttcacaagaactgcaagtctctgcttggggag
tgcaccagcagcaggaataagagagattcttcgcaccaatcaggatctctgaatcgtgcg
ttaaaggaccgggagcgggagcattcggggcaagcctcatcgcagccgctggatggccac
ccaggatttcatagcaccccaggcatgaccgttagtttgtggggaccaagcagccaaagc
gccaccgcagcctccgtcctcggtcacagcctccgtcaccacaacagctcaggattcctc
cccggggagatggatgagacggatgctgtccgccccaaacgctgcaacgaagacgccatc
tccctcgctccctccaccaccgagtccatcatcgttgaagatgctcactatgcagcagtg
cgggccgatctggagtccgatgcccaggacctggaggtagaatcatggagtttggcggtt
gaccagcagtacgttaagaagcactctaaagaaacagtgaagcgacaggatgtgatttat
gagctcatgcagacggagatgcaccatgtgcgaactctgaagataatgctgcgcgtgtat
gtccaagagttgaaggacaagctccagatggacgctggcaagctggactgtctgttcccc
cagttggaaaacctcctcgagcttcacacacatttcctgtctcgtctcaaagagaggcag
cgggaaaactttgtttcgcccaacgacaggaactacgccatcaacagactggcggacatt
ctgatttctcagttctccggggagatcggagaaaggatgaaagagagctatggggatttc
tgcagtcaccacaccgaggctgtcagctattacaaagaacagctgcacaacaacaaaaaa
ttccagaacctcatacggaaaatcaacaacctctccattgtgcggaggttaggagtgagc
gagtgtattctgttggtgacgcagcgcatcaccaagtaccccgtactagtggagcgcatt
ctgcacaacactgaagcggggacagacgagcatgaggacctgactcgggcactgggtctg
attaaagacaccatcgttcaggttgacacgctggttaatctccacgagaagaactctcga
ctccgggacataaacatcaagatggagccaaaggcacagggaaagatcaaagatggccga
gtgtttcgcagagaggacttggcacagggcaggagacgtttgctgcacgagggcaccgtc
aactggaaagctgcttctggcaggctcaaagatattcttgcggtgctcctgtcagatgtg
ttgctcctgctgcaagagaaggatcagagatatgtattcgctgcagtggataacaagcca
tcggtgatctcccttcagaaactgattgtcagggaagtggcccatgaggagaaagccatg
tttctcatctgcgcctcctccaatgagccagagatgtacgagatccacaccgccggcaag
gaggagcggaacacctggatgacacacatacggcaagctgttgagagctgtcctcataca
gaggagaggctgttcagtgaggaggaagaggcacgagcttccaggttcaaagagtttcaa
gagcggctgagccagaaggatgccgtggtcgtccaggctctcactgagaagctgcagctg
tttgccgacatggcagcgtctgtggccggtctagaggacacagcttctcgttccagactg
ctgcttcgaggggacgcctcagacctccagcagggagaggctctgctcaaaggagctctc
actgaggtggagaacctccagaacctgctgcagtccggagtgagggaggactccccaacc
tctcggctggacgagggcagcggttccgggctcctgcccaggcgagcagataccttcggc
ggctacgacagcagccccgccatcatcagcaagaatggcagcgtgaagaagaagttttct
gccgagaccagaagccgagatcgaagccagagagccagctctgacccgcagctcaaagac
ctgtgtggcagccacgccctggagcagacggttgatgagagctgctgctctcctgccaga
tggaaccgcatctggtccaactccttccccgaggccgagttctttgacagagtgctgatg
ctctcccaaaggctctatagtctgcaggccatcgtttcgcagcaggacagccacatcgag
ctgcagcgggcctcgttgacggagcgggccgccctgcccggccgccacagagggaacgtg
ctcctggagcaggagaagcagcgcactctggccctgcagagggaggagctggccagcttc
cacaagctgcaggctcagcaccggcaggagcagcatcgctgggagagggagagggagaga
caccggcaacaagtggaggccaccgaggcccgactccgacaacgggaggaggagtgcagg
cggctggaggagcatctcgcagaagagaggagggagctggagagtcagagggagacgtac
cagcaggacctggagaggctgagagagtccaccaaagctgtggagaaagaaaaggaacgc
ctggaacaccagaagatcaagaggaagactattgaggtggcttctttgtctgacagcctg
aacggggagctgctcctgtcctcgggcctcaacaccttccccagcgtctccgacctgccc
ctccctcagaagcccctggtgcgggccagcctctcggtcgcaccggccgactacctggag
cgccccaaggtgatgttgcggcgggaggccggctcctccaccctgccggcgaaggcggtg
ccgactcatctcttgagcaccaccaaccagcagcacaagctggtgggggtgcagcagcag
atccccaccaagttggcggccggcggcggcaaaggaaaggggggcaagatcggcaaagcc
tcgcatcgcaccgacagcactgcctcagtggacatgaaacagatgctgcctctgaagctg
tctgcccgagatgacaacaccctgaaggccaagcgttccgtcagcccccagcagcagctc
tcgctgtcgccccccccgcagcctcttcccctgcatcatcacgcggatccactcagtcct
gcagaccacgccggcccagacgcccagtccccttcctccgtcagcatcgcccaccctcaa
agtctccagaagcctcccatgcctcccgcgcagtcccatgctcagccgcccgcacagccg
ccccccaccatccctcccaactcgcagaccagcggctgcctccacctgcagccgcggggc
ctcagtccgaacgccccggcccgcgtccaggtaaacgttcacgggctcagccacagccac
agcatgccgccagcgtacaagaccgccgcggaagatctcaacaaggaggacgtcatcttc
ttctaa
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integrated database retrieval system
