Gasterosteus aculeatus (three-spined stickleback): 120823573
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Entry
120823573 CDS
T07457
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03020
RNA polymerase
gat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120823573 (polr2d)
09124 Replication and repair
03420 Nucleotide excision repair
120823573 (polr2d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120823573 (polr2d)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120823573 (polr2d)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
120823573 (polr2d)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120823573 (polr2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
BIG2_C
Tfb4
Motif
Other DBs
NCBI-GeneID:
120823573
NCBI-ProteinID:
XP_040039614
UniProt:
A0AAQ4Q0Z6
LinkDB
All DBs
Position
I:complement(154057..155222)
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AA seq
144 aa
AA seq
DB search
MAAGGSTASAHVGDVEEDASQLLFPKEFESSETLLNSEVHMLLEHRKQQNESAEDEQELS
EVFMKTLNYTARFSRFKNRETITAVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSV
EGRFEDEELQQILDDIQTKRSFQY
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggaggaagcactgcttctgctcatgttggagacgtcgaagaagacgcgtcg
cagctgctgtttcctaaagagttcgagagctcagagaccctgctgaactcagaggtccac
atgctgctggaacaccggaagcagcagaacgagagcgccgaggacgagcaggagctctcc
gaggtcttcatgaagacgctcaactacacggcccggttcagccgcttcaagaaccgggag
accatcaccgccgtgcgcagtcttctgctgcagaagaagctacacaagtttgagttggcc
agtttggccaatctgtgtccggaagcagccgaagaggcaaaagccctgatccccagtgtg
gagggtcgctttgaagacgaggagctgcagcagatcctggatgacatccagaccaaaagg
agcttccagtactga
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