Gasterosteus aculeatus (three-spined stickleback): 120823611
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Entry
120823611 CDS
T07457
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120823611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gat03041
]
120823611
Spliceosome [BR:
gat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120823611
Complex C
U4/U6.U5 tri-SnRNP related factors
120823611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
120823611
NCBI-ProteinID:
XP_040039675
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All DBs
Position
VIII:complement(6000645..6004407)
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AA seq
311 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
FGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKNVRLLGAMYMRLTGTAVDCYKYL
EPLYNDYRKEKNQNRNGEFELMHVDEFIDELLHAERMCDIILPRLQKRHVLEEAEMLDPR
ISALEEDLDEVESSDEEDEEEEKPERLQTPEPHRRRDGYRDNDRPRRSPSPRYRRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPERSSK
KSHKKSRRGND
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagaactgttaaagatgctaacagtatacacgggaccaatccgcagtatttg
gttgagaaaatcatccggactcgaatctacgagtctaaatactggaaagaggagtgcttt
ggtctgaccgctgagcttgttgttgacaaagcgatggagctgaagtacgtcggtggagtt
tttggaggaaacataaagcccactcctttcctctgcctcacgctgaagatgctgcagatt
caaccagaaaaagacattattgttgagttcatcaaaaatgaggatttcaaaaatgttcgt
ttacttggagcgatgtacatgaggttaactggcactgcagtggattgctacaaatacctg
gagccattgtataacgattacagaaaagaaaagaatcagaaccgtaatggggaatttgag
ttgatgcacgtggacgagttcattgatgagcttcttcatgcagagaggatgtgtgacatc
attctgccccgcctccagaaaagacacgtccttgaggaggctgagatgttagatccacgt
atcagcgctctggaggaagatctggatgaggtggagagcagtgatgaagaggatgaggaa
gaagagaagccggagcgactccaaaccccagagccccacagacgccgtgacggttaccgt
gacaacgaccggcctcgccgttctccgtcgcctcgttacagacgcagccgctcacccaga
cggaggagcagatctccaaagagacgaagcccgtcacccagaagagagcgccaccgcagc
aagagcccccgccgccaccgcagccggtccagagacagacgccaccgctccaaatctcca
ggtcaccacagaagccacagacatcgcagccactcaaagtcccccgagaggagttcaaaa
aagagtcacaagaagagtcgaagaggaaacgattga
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