KEGG   Gasterosteus aculeatus (three-spined stickleback): 120823626
Entry
120823626         CDS       T07457                                 
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03018  RNA degradation
gat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120823626 (lsm7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120823626 (lsm7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gat03019]
    120823626 (lsm7)
   03041 Spliceosome [BR:gat03041]
    120823626 (lsm7)
Messenger RNA biogenesis [BR:gat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120823626 (lsm7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     120823626 (lsm7)
Spliceosome [BR:gat03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    120823626 (lsm7)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 120823626
NCBI-ProteinID: XP_040039697
LinkDB
Position
8:14308618..14310545
AA seq 103 aa
MADKEKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QLKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQQQDG
NT seq 312 nt   +upstreamnt  +downstreamnt
atggcggataaagaaaagaagaaaaaggagagcatcttcgacttgtcaaaatacatcgac
aagccaattcgtgtgaagtttcaaggaggacgagaggccagcggtgtcctgaaggggttt
gatcctctgctgaacctggtactggatggtactatcgagtacatgcgtgacccagatgac
cagctgaagctgacagaagacaccaggcagctgggtctggtggtctgcagaggaacctcc
gttgtgctaatctgtccgcaggacggcatggaggctataccgaaccctttcgtacagcag
caggatggctaa

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