KEGG   Gasterosteus aculeatus (three-spined stickleback): 120823650
Entry
120823650         CDS       T07457                                 
Symbol
ell
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120823650 (ell)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gat01009]
    120823650 (ell)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gat03021]
    120823650 (ell)
Protein phosphatases and associated proteins [BR:gat01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120823650 (ell)
Transcription machinery [BR:gat03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     120823650 (ell)
    Little elongation complex (LEC)
     120823650 (ell)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing DUF6902 DUF4642
Other DBs
NCBI-GeneID: 120823650
NCBI-ProteinID: XP_040039749
LinkDB
Position
VIII:17136776..17160751
AA seq 631 aa
MAALKEEQCYGLSCGRVSNGSNVSVFHVKLTDSALRAFEGFQSTKVLSSRPLIRFNGNQG
KISIPRSENSSELQSFTFYLSNVGRDNPQGSFDCIQQYITSEGSIQLDCLGGIQDKITVC
ATDESYQKARENMAQVEEETRSRSAIVIKPGSRFLGKKVQIRKPAPGLSDVAPLRRTSRP
VIISSSTIKKGTPQHRPLRERLTHLLALKPYKKAELIVRLQKDGLLPLDKDSLDSYLQQV
ANLNGKDDTFTLKDILYKEIQNDWPGYTEKDQQLLKRIMFKKLNSTAPLLESPPKELAGS
SPSQKRPAADFIDPLANKKPRISHLASKLXNSPGQGKLSNGRVEGGSAPAGVAVXMSDAA
VTSSSQPLPLLDIPRPFEALSDVSNDSSHNGRDCDSQETAASERLGQQPSLLTAPAVAVA
ASFPAHMGTLVPKRDKSPSSLHSKSRKKSKKHKDKEKSKDKAKEKAQEKERKSRGDRVPE
PNQACALSPASLKSNSIPYKSTDLNGLCNSSSIPTSSPEVAGYLLKYTVIASPEQRQRYK
NDFNAEYSEYRGLHARIDGITRQFTVLDNELKQLHQGTDKYKTIHNQILQEYHKIKKTNP
NYSQEKNRCEYLHNKLAYIKRLIAEYDQQQL
NT seq 1896 nt   +upstreamnt  +downstreamnt
atggcggcgctgaaggaggagcagtgctacggactgtcctgtggaagagtgagcaacggc
agcaatgtctccgtcttccacgttaaactcactgacagcgcgctgcgggcgttcgaaggc
tttcagagcaccaaggttctgtcatcgaggccattgatcagatttaatggaaaccaaggg
aaaatctcaataccccgctcagaaaattccagtgaactgcagtcgtttacgttctacctg
tcgaatgtgggcagagataacccgcagggcagcttcgactgcatccagcagtacatcaca
agtgaagggagcattcagctggattgtttgggtgggatccaggacaagattacagtgtgt
gccacggacgagtcctaccagaaggccagggaaaacatggcccaggtcgaggaggagacg
cgcagccggagtgccattgtcatcaagcccgggagcagattcctaggtaagaaggttcag
atccggaaaccggcacctggcctgtcggacgtcgccccgttgcggaggacgtctcggccc
gtcatcatctccagcagcacgataaagaagggcacgccgcagcacaggccgctccgagag
cgcctcacgcacctgctggccctcaagccttacaagaaggccgagctcatcgtgagattg
cagaaagatggcctcttgccgttagacaaggactccctggatagctacctgcaacaggtg
gcgaacctgaacgggaaagacgacaccttcacattgaaggacattttgtataaggagatt
cagaacgactggcccggctacacggaaaaagaccagcagcttctcaagagaatcatgttc
aagaaactgaacagcaccgcccctctgctggagagcccccccaaagagctggccggcagc
tcgccgtctcagaaacgacctgctgccgacttcatcgaccctctcgccaacaaaaagccg
aggatatctcatctcgccagcaagctgnncaacagccccggtcaagggaagctcagcaac
gggcgagtggaggggggcagcgctccggcgggcgtggcggttnncatgtcggacgccgcc
gtgacgtccagctcgcagccgctcccgctgctcgacatcccccgtcccttcgaagccctg
tcggacgtcagcaacgactccagccacaacgggcgggactgcgactctcaggaaacggcg
gcgtccgagaggctcggccagcagccgtcgctgctcacggcgcccgccgtcgccgtcgcc
gcgtcgttccccgcgcatatgggcacgcttgttcccaagagagacaagagtccgtcgtct
ttgcacagcaagtccaggaagaagtccaaaaagcataaagacaaggagaagagcaaggac
aaggcgaaagaaaaggcccaagagaaggagaggaagagtcgtggggatcgtgtgcctgag
cccaaccaagcctgtgcgctgagtccagccagcctcaaaagcaacagtattccatacaaa
agcacagatctgaacgggctgtgcaacagttccagtattcctacgtcgtcaccagaggtg
gcgggctatttattgaagtacacggtgatcgcctctccggagcagcggcaaaggtataaa
aacgatttcaacgccgagtacagtgagtaccggggtctgcacgcccggatagacggcatc
acccggcagttcactgtgctcgacaacgagctgaaacagctccatcaaggcacagacaag
tacaagacaatccacaatcagatacttcaagagtatcataaaataaaaaagactaatcca
aactatagccaagagaagaaccgctgtgaatatctacacaacaaactggcgtacataaag
agactcattgccgagtacgatcaacagcaactttaa

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