Gasterosteus aculeatus (three-spined stickleback): 120823779
Help
Entry
120823779 CDS
T07457
Symbol
ptbp1b
Name
(RefSeq) LOW QUALITY PROTEIN: polypyrimidine tract-binding protein 1b
KO
K13218
polypyrimidine tract-binding protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120823779 (ptbp1b)
03041 Spliceosome [BR:
gat03041
]
120823779 (ptbp1b)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120823779 (ptbp1b)
Spliceosome [BR:
gat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120823779 (ptbp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120823779
NCBI-ProteinID:
XP_040040004
LinkDB
All DBs
Position
VIII:18675153..18686388
Genome browser
AA seq
537 aa
AA seq
DB search
MDGSVHQDLTVGTKRGSEETFPSVSIGPYIMSTTANGNDSKKFKGDIRGPGVPSRVIHIR
KLPNDISEAEVISLGLPFGDITNLLMLKAKNQAFLEMNSEEAAQNMVGYYSTVMPIIRNH
LVYVQFSNHKELKTDNSPNQERAQAALRALTSSHVDPTMVAPSAVLRVVVENLVYPVTLD
ALCQIFSKFGTVLRIIVFTKNSQFQALLQYAEGASAQSAKLSLDAQNIYNGCCTLRISFS
KLTTLNVKYNNEKSRDFTRPDLPSGDSQPSMEHPAMATAFTPGIISAGPYGGAAHGFQPA
FTLQPAMSSHYPGLVPAMPGALASLSLPGAARLGFHHMSAGVSVLLVSNLNPERVTPHCL
FILFGVYGDVMRVKILFNKKENALVQMSDCTQAQLAMSHLSGQQLHGKSLRITPSKHTSV
QLPREGHEDQGLTKDYSNSPLHRFKKPGSQNYSNIFPPSATLHLSNIPPSVWEDDPEMLF
STSGAMVKAFKFFQKDHKMALIQMGSVEEALEALIEFHNHDLGENHHLRVSFSKSSI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggcagtgtccaccaagatttaacagttggtactaagagaggatctgaagagact
ttccccagcgtctccatcggcccgtatatcatgagcaccacagccaatggaaacgacagt
aagaagttcaaaggtgacataagaggccccggggtgccgtccagggtcatccacatccgc
aagctccccaacgacatctccgaggccgaggtgatcagcctcggtctgccgttcggagac
atcaccaacctgctgatgctcaaagccaaaaaccaggccttcttggagatgaactcggag
gaagcggcgcagaacatggtgggttattactccaccgtgatgcccatcatcaggaaccat
ctggtctacgtccagttctccaaccacaaggagctcaagaccgacaactctcccaaccag
gagagggcccaggctgctctccgggccctcacttcttctcacgtggacccgactatggtg
gctccgagcgccgtgctgagggtggtggtggagaacctggtgtaccccgtcaccttggac
gcgctctgccagatcttctcaaagttcggcacggtgctgaggatcatcgtcttcaccaag
aacagtcagttccaggctctgctgcagtacgccgagggagcctccgcccagtccgccaag
ctgtctctggacgctcagaacatctacaacggctgctgcactctgaggatcagcttctcc
aaactcaccaccctcaacgtcaagtacaacaacgagaagagccgcgacttcacccgaccc
gacctgccctccggggacagccagcccagcatggagcacccggccatggccaccgccttc
actccagggatcatctcagctggaccgtacggcggcgcggctcacggcttccagccggcc
ttcaccctccagccggccatgtcctcccactatccaggcctggtccccgctatgcccggg
gccctggcctccctgtccctccccggggccgccaggctggggttccaccacatgtctgct
ggagtctcagtcctgctggtcagcaacctgaaccctgagagagttacgccccactgcctc
tttattctcttcggtgtttatggcgacgtgatgagagtcaagattctgttcaacaagaag
gagaacgctctggtccagatgtcggactgcacacaggctcagctagccatgagccacctg
agtggacagcagctgcacgggaagtctctgcgcatcacgccgtccaaacacaccagcgtg
cagctgccccgagaaggccacgaggaccagggcctgaccaaggactacagcaactccccg
ctgcaccgcttcaagaagcccggctcccagaactactccaacatcttcccgccttcggcc
accttgcacctgtccaacatccccccgtctgtgtgggaggacgaccctgagatgctgttc
tccacctccggagccatggtcaaggccttcaagttcttccagaaggaccataagatggct
ctgatccagatgggctcggtggaggaggcgctcgaggcgctcatcgagttccacaaccac
gacctgggggagaaccaccacctgcgggtctccttctccaagtcctccatctga
DBGET
integrated database retrieval system
