Gasterosteus aculeatus (three-spined stickleback): 120823781
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Entry
120823781 CDS
T07457
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120823781 (sox2)
Transcription factors [BR:
gat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120823781 (sox2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120823781
NCBI-ProteinID:
XP_040040005
UniProt:
G3NRV5
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All DBs
Position
VIII:7336618..7339805
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AA seq
324 aa
AA seq
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MYNMMETELKPPAPQTNTGGPGNTNTSGTGPNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLSAGGNGMGAGVGVGVGAGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQL
SYQHPGLNAHNPGQMQSMHRYDMSALQYNTMASSQSYMNGSPTYSMSYSQQGTPGMTALG
SMGPSSVVKSESSSSSPPVVTSSSHRAGPGCQSGDLRDMISMYLPGAEVSEQSAQTRLHM
SGHYQSAVPGTTINGTLPLTHMEL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagccgccggctccccagaccaacacggggggc
ccgggcaacaccaacacgtccggcaccggccccaaccagaaaaacagcccggagcgggtc
aagagacccatgaacgccttcatggtgtggtcccggggccagaggaggaagatggcgcaa
gaaaaccccaaaatgcacaactcggagataagcaagaggctgggcgcggagtggaaactt
ctgtcggagagcgagaagagacctttcatcgacgaagccaagaggctgcgggccctgcac
atgaaggagcacccggattacaaataccggccccggcggaaaaccaagacgctgatgaag
aaggacaagtacaccctgcccggcgggctgctgtccgcgggaggcaacgggatgggagcc
ggcgtcggcgtcggggtcggggccgggctgggcggcggggtgaaccagcggatggacagc
tacgccgcgcacatgaacggctggaccaacggcgggtacggcatgatgcaggaccagctg
agctaccagcaccccgggctgaacgcgcacaacccgggccagatgcagtccatgcaccgc
tacgacatgagcgccctgcagtacaacaccatggccagctcccagagctacatgaacggc
tccccgacatactccatgtcctactcccagcagggcacgccggggatgaccgccctgggc
tccatggggccctcctcggtggtgaagtccgagtccagcagctccagcccgcccgtcgtc
acctcgtcgtcccaccgggccggcccgggctgccaaagcggggatctgagggacatgatc
agcatgtatctgcccggggcagaggtcagcgagcagtccgcccagaccaggctacacatg
tccgggcactaccagagcgccgtgcccgggacgacgatcaacggcacgctgccgttaaca
cacatggagctctag
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integrated database retrieval system
