Gasterosteus aculeatus (three-spined stickleback): 120823805
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Entry
120823805 CDS
T07457
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120823805 (fxr1)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120823805 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
120823805 (fxr1)
mRNA cycle factors
Stress granule specific factors
120823805 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXR_C1
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH-I_KHDC4-BBP
Tudor_2
DUF150_C
Motif
Other DBs
NCBI-GeneID:
120823805
NCBI-ProteinID:
XP_040040075
LinkDB
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Position
VIII:7238163..7248622
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AA seq
754 aa
AA seq
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MEQVPLQPPNLCPDASSSTCRPDTLCASTMEELVVEVRGSNGAYYKGVIKDIHDDSLTIA
FENNWQPERQVPFNDIRMPPPPDAKKEIGEGEEVEILSKANDLEPCGWWLAKVRMMKGAF
YVIEYAACDATYNEIVTFERLRPVNTNKAITKNSFHKCTVSIPQDLQEACQSENAHKDFK
KAVGACRISYCPETSQLLIVSTNEATVKRVSLLSDMHLRSIRTKLLLMSRNHEATKHLES
SRQLVSSFQEEFMVRTDLMGLAIGSHGSNIQQARKVPGVSAIDLDEETGTFRIYGETVEA
VKKARNYLEFLEDSVQVPRALVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNDTKQPRQEL
TQGMVPFTFVGTKESIGNVQVLLEYHISYLNDMKELLAEGQQLEEELRQIEDYTQESRLA
RLRICNKRHTEVEQLRLERMQIDEQLRQITQVHRPGDRERGERAGGGGGGYNTDGNASSS
SLHGSRSYNGRGRGRRGHGYSTGYGTNSEQSNASETDSERKEELSDWSLAGEDQDREREK
GSRPQRDARRRPGPARGRGGFGVRGRGGRGGYSNSSAGPRDHEDNNAFGAAETETDQTAD
TDASESNLPANRRRRSRRRRTDEEATLIDGISESDNASTSENGIDDSEVKPQRRNRSRRR
RIRLPEERQPVTVADYISRADSQSRETPTTKDTKKNMDVGQVDAIAEDSPPSPPATANGS
DNAADTECSNGPGAPAKVPYQGDGSPQPVANGLS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtgcctctccagcctccgaacttgtgccccgatgcctccagcagcacctgt
cgtcccgacaccctttgcgcgtccactatggaggaactggtggtggaggtccggggctcc
aatggggcttattacaagggcgtcatcaaagatatccacgatgactctctcaccattgcc
tttgagaacaattggcagccggagcggcaggtccccttcaatgacatccggatgccacct
ccccccgacgccaagaaggagatcggggagggcgaggaggtggagatcctctccaaagcc
aatgacctggagccttgtggttggtggctggctaaagtccgcatgatgaagggagctttc
tatgtgatcgagtatgccgcgtgcgatgccacctacaatgagatcgtgacctttgagcgt
ctgcgtccagtcaacactaacaaggccatcaccaagaactcctttcacaagtgcactgtc
tccattccccaagatctacaagaagcgtgccagagtgagaatgcccataaagattttaag
aaagctgtgggagcctgtcgcatctcgtactgccctgagaccagccagctgctgattgtg
tccaccaatgaggcaaccgtgaagcgtgtttctttgctgagtgacatgcacctgcgcagc
atcaggaccaagctgctgctaatgtcacgcaaccatgaggccacaaagcacctggagagc
tccaggcagctggtgtcgtccttccaggaggagttcatggtgagaacggatctgatgggc
ctggccatcggcagccatggcagcaacatccagcaggcacggaaagttccaggggtcagt
gccattgaccttgatgaggagactggcacgttcaggatttatggagagacagtggaggcc
gtgaagaaggccaggaactacctggagtttttggaggactctgtccaggtgcccagagcc
ctcgttggcaaagtgattggcaagaacggtaaggtcatccaggagattgtggacaagtcc
ggtgtggtgagggtcaggatagaaggggacaatgacaccaagcagcctcgacaggaattg
acacagggaatggtcccattcacctttgtcggtactaaggagagtattggaaatgttcag
gtcttgctggagtaccacatctcttacctgaatgacatgaaggagcttcttgcagaaggc
cagcagctagaggaagagctgaggcagattgaggattatacacaggaaagccgcctagca
agattgagaatatgcaacaaaaggcacactgaagttgagcagcttcgtctggagagaatg
cagattgacgaacagctacgtcagatcacccaggttcatcgcccgggtgacagggagaga
ggggaaagagcaggaggaggaggcggagggtataatacggatggcaatgcctcctcctcc
tctttacatggcagccgctcctacaacggccgagggcgcgggcgcagaggccacggctac
agcaccggatatggcaccaactcggagcagtccaacgcctctgagaccgattcagagcgc
aaggaagagctgagtgactggtcccttgctggagaagaccaggacagggagagagagaaa
ggctcacgaccccaaagagacgcccgcaggaggcccggacccgccaggggccgaggcggg
tttggagtgcgggggcggggaggaagaggagggtacagcaacagctctgcaggtcctcgg
gaccacgaggataacaatgccttcggcgctgcggagaccgagacggaccagacggctgac
acagatgccagcgagtccaacttgcctgcaaaccgacgcagaagatctcggcggcgcaga
acagacgaagaagccacactgattgatggcataagcgagtccgacaacgcctcaacgagt
gagaacggaatagacgactcagaagtcaaacctcagcgccgcaatcgtagtcgacgccgc
cgcatccgcctgcccgaggagaggcagccagtgacggtggctgactacatctcacgggcg
gattctcagagcagagagacgccgaccactaaggacaccaagaagaacatggatgtgggt
caggtggatgccatcgctgaggacagcccaccatcgccaccggcgaccgccaacggttct
gacaatgctgccgacaccgagtgcagcaatggccccggagctcccgccaaagtcccctac
cagggggacggaagcccccaacctgtcgctaacggactctcctag
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