Gasterosteus aculeatus (three-spined stickleback): 120823822
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Entry
120823822 CDS
T07457
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04010
MAPK signaling pathway
gat04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120823822
04020 Calcium signaling pathway
120823822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120823822
Ion channels [BR:
gat04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120823822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
120823822
NCBI-ProteinID:
XP_040040124
LinkDB
All DBs
Position
VIII:14876088..14945402
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AA seq
2543 aa
AA seq
DB search
MLELGSRSVSSQSLTGDHNALGPPRASSGAEGSGGGLGKGPMSGSSTPRRHPVPSSPMDS
EDWQEHRAGPAGGSSRLSESHSFLEPQSLSASYDTLYLPHVSGHGPPPLHPNRLGLCLDV
ASTFEVGAGMLGVDGDSAVSPNVMKRRRGGLIEQKDIVKAHQAHKIHSTPQARRKEWEMA
RFGDDVPGLLSSGDGGSERNRNRDGAAVSTGGISPAFKQTKAQRARTMALYNPIPVRENC
FTVNRSLFIFGEDNVVRKYAKKVIEWPPFEYLILTTIIANCIVLALEQHLPGEDKTPMSK
RLEKTEPYFIGMFCLEAGIKIIALGFVFHKGSYLRNGWNVMDFIVVLSGILAAAGAHLNI
SVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEF
YSGKLHYTCVPQAGILENETVDSSEYEVPCGDRQCPAKYTCSDTWIGPNDGITQFDNILF
AVLTVFQCITMEGWTTVLYNTDDALGPRYNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKE
RERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENTNSGTSALDALRSLPEWS
TGGAYVLKRATTIKRRGMDAGHRGQPGEEPYGDFSSVGLPMARARSAKRGPAAFFRRKER
LLRISIRRVVKTHTFYWTVLGLVALNTLCVAIVHHNQPLWLSNFLYYAEFLFLALFLTEM
FLKMYSLGPRLYFHSSFNCFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKIT
KYWASLRNLVVSLMNSMKSIISLIFLLFLFILVFALLGMQLFGGRFIFEDYTPTNFDTFP
AAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVD
NLANAQELTKDEEEAEAAFNQKHALQKAKEVGPLSSFMSSEGSRRRRPYLYRKRAIHRSR
PTYSCSLKEAQGSVREGRPPPPLNPCNSFMSRRERRKRMTMSVWEQRTSQLRRHRQMSSR
EVLFTGPGEEKDGSPPSAQTQDGHPPPAQRKAPEHTQTGSLKQLADPLVSPSKNQAPGPS
VLADAPLEANRSGDISEPQAEAGAESLNATNVPLADVSISVAAPAPQESDCVAESGTPLD
RSPDGDCVRPSPRLNCERQHRAVKKFRPPENFDALAPGTGGHAGVRGRRALHHCDRQNGT
RGQGSSPGNGSRSASRSVSRERRRKPGKMEEKEAEAEGEEGLSKPDESRQSDVSERGATE
PPDNLDHTTDQGPQTQEDLSPPVIPDNNKEENETVQDQDQDKAQLSSSVIIDVPNVQSSL
ELSTITVIGKDSETCKSEGEEADDTKPANNVTPDSMFLFKPDNLVRRACHYVVNLRYFEM
SILLVIAASSIALAAEDPVATSSHWNKVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSY
FRDLWNILDFIVVVGALVAFALSNVMGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKA
VFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKDCQGYYIDYE
KDKKEVKRRDWKRHEFHYDNVIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSHGNRM
EMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAIGAKPLT
RYMPQNRHTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPAYEAVLKHLNTAF
TVLFSVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVDLQFVDTFNMSFLKLFRA
ARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNEETHI
TQHNNFKTFSGALMLLFRSATGESWQEIMLSCLGGQKCERDPAVFQTSDQEGGCGSDFAY
FYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAACGRIH
YTDMYEMLTNMSPPLGLGKKCPSKLAYKRLVLMNMPVDDDMSVHFTSTLMALIRTALEIK
IARGGEDRNHMDLDLQKEIGVIWPHLSQKTLDLLVPIHKASDMTIGKIYAAMMIMDYYKQ
SKAKKLRQQLEEQKHAPMFQRMDASSLPQEILCNAKSLSFLRHSAGSALARGGFGALSPI
APQEMFLQPLSRSMEEKDEDDDDDYRSPYLQYHHPHPHHHLHTLVPEVVEYNQVMQQARR
DATVIKFPQRTASIRASSMPRLAVDPPLGMSADSKPMQRSFSTIGDQCVNGLWQEQHSLE
RISPDGTYRPRQRSYRGPRINHKETSSHERGRSKERRHLLSPDVSRCNSEERSRDPSRER
RRSRSPSEGRKHTLQRQTLVNTSGSPAHSAPESGTPRNRRQLPQTPSRPRPYISYSPLVC
QAHDSPAPAAPSEDQTQPQDGPGGSKATAWSAGREGGPLTAVQGSSEGQVSGPSHPSPHR
YISEPYLPFRGDVGAGGAGDGQDTLTFETAVATSLGRANAISSAPQLRHSWQLPNGLYRK
NLGQAGAAGASELLSDTDEDDRC
NT seq
7632 nt
NT seq
+upstream
nt +downstream
nt
atgctggaactgggctcccgttcggtcagctcccagtctctgacgggggaccacaatgca
ttggggccaccgagagcttcatcaggggccgagggctcaggaggtggtctgggcaagggg
ccgatgtccggaagcagcaccccgaggcgccaccccgtcccctcgtccccaatggacagc
gaggactggcaggagcaccgcgcgggaccggccggtgggtcgagccggttgtctgagtcc
cactccttcctggagccacagagtctgtccgccagctacgacaccctctacctcccacac
gtgtccggccatggcccccccccactacatccgaaccggctcggcctctgcctggacgtg
gcctctacttttgaggttggagcagggatgttaggggtggatggggactcggcggtcagc
cccaacgtgatgaagagacgtcggggcggcctgatcgagcagaaggacatcgtcaaagcc
caccaggctcataagattcacagcacgccgcaggctcgacgcaaggagtgggaaatggcc
cggtttggagacgacgtgccgggcttgttgagctcaggtgatggagggtccgagcgcaac
cgcaaccgcgatggggcggccgtgtccacaggtggcatctcccccgccttcaagcagacc
aaagcgcagcgcgcccgcaccatggccttgtacaaccccatcccggtcagggagaactgc
ttcaccgtcaacaggtccctcttcatctttggcgaggacaacgtggtcaggaagtacgcc
aagaaagtcattgagtggcctccatttgagtacctgatcctcaccaccatcatcgccaac
tgtatcgtcttggctctggagcagcaccttcccggagaggacaagaccccaatgtcaaag
aggctggagaagacggagccctacttcatcgggatgttctgtctggaggctgggatcaag
atcatcgccctgggctttgtgtttcataaaggctcctacctcaggaatggatggaacgtc
atggacttcattgtggtcctcagtgggatcctggcggcagcgggggcacacctgaacatc
tcagtggacctgaggactctgagggccgtgcgagtgctgcgtcccctcaaactggtgtca
ggcatcccgagtctgcagatagtcttgaagtctataatgaaggccatggttcctctgctg
cagatcggcctgctgctcttttttgcgatcctcatgttcgccatcatcggcctggaattt
tacagcggcaaactgcactacacctgcgtgccgcaggcggggatcctggaaaatgaaacg
gtggactcctctgagtacgaggtcccgtgcggcgatcgccagtgtccagccaaatacacc
tgcagcgacacttggatcggcccgaatgacggcatcactcagtttgacaacatcctgttt
gctgttctcaccgtcttccaatgcatcaccatggagggatggaccactgtactctacaat
actgacgatgccttgggccccagatacaactggctgtacttcatccctctcatcatcatc
ggctctttcttcgtcctgaatcttgtgctgggagtcctctctggggaatttgcgaaggag
agggagagggtggaaaaccgcagggctttcatgaaactgagacgccaacagcagatcgag
agagagctcaacggctaccgggcctggatcgacagagcagaagaagtgatgctcgcagag
gagaatacgaattcggggacttctgccctcgatgctctcaggagcctcccagagtggagt
acaggtggtgcctatgtgttgaagagagccaccaccatcaagaggagagggatggatgcg
gggcatcgagggcaaccaggggaggagccatatggcgacttctcctctgtgggcctcccc
atggccagagcacgcagtgccaagcgaggcccggcggcgtttttccgccgcaaggagcgt
ctcctccgcatctccatccgccgcgtggtgaagacgcacactttctactggacagttctg
ggcctggtggctctcaacacgctgtgcgtggccattgttcaccacaaccagcctctctgg
ctgtccaacttcctctactatgcagagttcttgttcctcgctctgttcctgactgagatg
tttctgaagatgtacagcttggggccgcgtctgtacttccattcctcctttaactgcttt
gactgcagcgtgattgttggcagcatctttgaagtgctgtggggtttcttcaggcccggc
acctccttcggcatcagtgtcctgcgtgcactccgtctgctgaggatcttcaagatcacc
aagtattgggcgtctctgagaaacttggtggtatctctgatgaactccatgaagtccatc
atctccctcatcttcctgctcttcctcttcatccttgttttcgcgctcctcggcatgcag
ctctttggtggcaggttcatctttgaagactacaccccaactaactttgacacctttcct
gcagccatcatgaccgtctttcagatcctgactggagaggactggaacgaggtgatgtac
aatggtattcgctctcaaggaggagtgaagtctggcatgtggtcctccatctacttcata
gtgctcacactgtttggcaactacacactgctgaacgtcttcttggccatcgctgtggac
aacctcgccaatgcacaagaactaaccaaggatgaagaggaggctgaggcggcgttcaac
cagaagcacgctctccagaaggcgaaggaggtcgggccgttgtcctccttcatgtcttca
gaggggagccggaggaggcggccctacctgtacagaaaaagagccatccaccgcagccgg
cccacctactcctgctccctgaaggaggcccagggcagcgtcagggagggccgcccaccc
ccacctctcaacccctgtaactctttcatgtccaggagagagagaagaaaaaggatgacc
atgtcagtgtgggagcagaggaccagtcagctgcggaggcaccggcagatgtccagccgc
gaggttctgttcactggccccggcgaggagaaggacgggtcccctccctcagcccagacc
caagatggacatcccccgccggcgcaacgcaaggccccggagcacactcagaccgggagt
ttgaagcaactggcagaccccttagtctctccgtccaagaaccaggctccgggcccctcc
gtattggcggacgcccctctggaggccaaccgctctggtgacatatccgaaccccaagcg
gaagcgggcgcagagtctttgaacgccaccaacgtgcccctggccgacgtttccatttcc
gtggccgcgccggctcctcaggagtccgactgcgtcgctgagagcgggacgccgctcgat
cggagtcccgacggcgactgcgtgcgtccgagccccaggttgaattgcgagcgtcaacac
agggcggtgaagaagtttaggccgccggagaactttgacgcactggctcccggcacgggg
ggtcacgccggggttcgggggcggagggcgctgcatcactgcgatcgtcagaacgggacc
cgcggtcaggggtcctcacccggcaacggaagccgctcggcgagtcgctcggtcagcaga
gagaggaggaggaaaccggggaaaatggaggagaaggaggccgaggctgaaggggaggaa
ggactgtcgaagcccgatgagagcaggcagagtgacgtgagtgagagaggagccaccgag
ccaccagacaacctggaccacaccactgaccagggtcctcagacgcaggaagacctgtct
cctcctgtcatcccagacaacaacaaggaagagaatgagacggtccaggaccaggaccag
gacaaagctcagctcagctccagtgtgatcatcgatgttcccaacgttcagtcatctctg
gagctctctaccattacagtcatcggtaaggactcggaaacctgtaaatcggagggcgag
gaggcggatgacacaaagcccgctaacaacgtgaccccagacagcatgttcctcttcaaa
cctgacaacctggtgcgtcgagcgtgtcactacgtggtgaacctcaggtactttgaaatg
tccatcctgctggtcatagcggctagtagtatagcactggctgctgaggaccctgtagcc
acctcctctcactggaataaggtccttcggtattttgattatgtgttcaccggagtcttc
acatttgagatgattataaagatgattgaccagggtctgatcctccatgacggctcctac
ttcagggacctgtggaacatcctggacttcatcgtcgtggtgggagcgttggtggccttc
gccctctccaatgtgatgggaaacaacaaagggcgggacattaagaccatcaaatccctg
agagtgctgcgtgtcctcagaccactgaaaaccatcaagagacttcctaaactcaaggcg
gtgtttgactgtgtggtgacgtccctgaaaaacgtcttcaacatcctcatcgtctataag
ctctttatgttcatttttgccgtcatcgctgtgcagctcttcaaagggaaatttttctac
tgcaccgacagttcaaaggacacggagaaggactgccaaggttactacatagactacgag
aaggacaagaaagaggtgaagaggagagactggaagagacacgagtttcactacgacaac
gtcatctgggctctcctcaccctcttcaccgtctccactggcgaggggtggcctcaggtt
ctgcagcactcagtggacgtgacggaggaggacaggggtccgagccacggcaacaggatg
gagatgtctatcttctacgtcatctactttgtcgtctttcctttcttcttcgtcaacatc
tttgtggccctcatcatcatcaccttccaggaacagggcgataagatgatggaggagtgc
agcctggaaaaaaatgagagggcgtgtatagactttgccatcggtgccaagcccctgacc
cgttacatgccccagaaccggcacacgttccagtaccgtctgtggcactttgtggtgtct
ccctcttttgagtacaccgttctggccatgatcgccctcaacaccatcgtactgatgatg
aagtattactctgccccgccggcatacgaggccgtactgaagcacctgaacacggctttc
actgtcctcttctcggtcgagtgcgtcctcaagatcatggcctttggcttcctgaactac
tttcgagacacgtggaacattttcgacttcatcactgtcttgggcagcatcacagagatt
gtggttgacttgcagtttgtggatacgttcaacatgagtttcttgaagctgttcagagca
gcccgtctgatcaagctgctcagacaaggttacaccatccggattcttctgtggaccttc
gtccagtccttcaaggcactgccctacgtctgcctgctcatcgccatgctcttcttcatc
tacgccatcatcggcatgcaggtgtttgggaacatcaagctgaacgaggagactcacatc
acgcagcacaacaacttcaagaccttttctggtgctctgatgctgctgttcaggagtgct
acgggggagtcatggcaggagatcatgttgtcttgtctggggggacaaaagtgcgagagg
gacccggcggtttttcagacgtcggaccaagagggcggctgtggctccgactttgcttat
ttctactttgtctcgttcattttcttcagttccttcctgatgctgaacctgtttgtggcc
gtgatcatggataactttgagtacctgacgagagactcgtccatcttgggtcctcaccac
ctggacgagttcgtccggatctggggggagtatgaccgcgctgcctgtggtcgtatccat
tacactgacatgtatgagatgttgaccaacatgtcgccacctctaggcctgggcaagaaa
tgcccctccaagttggcatacaagagactcgtcctgatgaacatgcccgtggacgacgac
atgtccgtccacttcacctccaccctcatggccctcatccgcaccgccctggagatcaag
atagccagaggaggggaggacagaaatcatatggacctggacctgcagaaggagatcggt
gtcatctggcctcatctctctcagaagacgttggatctgctggttcccattcacaaagcc
agtgacatgaccatcgggaagatctatgccgccatgatgatcatggactactacaagcag
agcaaggccaagaagctccgacagcaactggaggaacagaaacacgctcctatgttccag
cgtatggatgcctcctctctgcctcaagaaatcctatgcaatgccaaatccctctcgttc
ctcaggcacagcgccggatctgctctagccagagggggttttggggcacttagccccatc
gctccgcaagagatgttcctgcagccgctgtcccgctccatggaggagaaggacgaagac
gatgacgacgactatcgctcaccttacctccaataccaccacccgcatccccaccatcat
ttacacacgctggtaccagaagttgttgagtataaccaagttatgcagcaggccaggcgg
gatgcaacagtcattaaattccctcagcggacagcatctatccgagcgtcctccatgccc
agactggctgtagatccaccgcttgggatgtccgcagacagtaagccgatgcagcgctcc
ttctccaccattggagaccagtgtgtgaacggactctggcaagagcaacactctctggag
agaatcagtcctgacggcacatacaggcctcgccaacggagctacagaggtcctcgaatt
aaccacaaggagaccagcagtcatgagagagggcgatctaaggaacggcgccacctgctg
tctcctgacgtgtcccgctgcaactctgaggagcgcagccgcgacccatcacgcgaaagg
aggaggtcccgttcaccgagcgaagggcgcaaacacaccttgcagagacagacattggtg
aacacatcgggcagcccggcccattcggccccagagtccggtactccccgtaaccggcgc
cagctgccccaaacgccgtctcgcccgcggccttacatctcctactcccctctggtctgc
caagcccacgactctcccgcaccagctgccccctccgaggaccagacccagcctcaggat
ggccctggcggctccaaggcgaccgcgtggagcgccggcagggagggtggccccctcact
gcggttcaggggtcatccgagggtcaagtttcaggaccaagccacccgtctcctcaccgc
tacatctccgagccctacctaccgttccgcggggacgtcggcgctggaggggcgggcgac
gggcaggataccctcacttttgagactgccgttgcgaccagcctgggacgggccaacgcc
ataagctccgccccccagctcagacactcctggcagcttcccaacgggctctaccggaag
aacctgggccaagcgggtgcagccggggccagcgagctgctaagtgacacggatgaggat
gaccgctgctaa
DBGET
integrated database retrieval system
