Gasterosteus aculeatus (three-spined stickleback): 120823831
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Entry
120823831 CDS
T07457
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein
KO
K09291
nucleoprotein TPR
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120823831 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120823831 (tprb)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120823831 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
DUF7491
Motif
Other DBs
NCBI-GeneID:
120823831
NCBI-ProteinID:
XP_040040148
LinkDB
All DBs
Position
VIII:9659095..9683118
Genome browser
AA seq
2371 aa
AA seq
DB search
MAALPLQELEGSEIAKLEKIISDQQYNIDCLKAQQERHRVDSEQQFFEKKNQLAQCQEDF
LSQTQEHFNLKEEFRKQEEDLKRVREENGEYESAQARLSSEQTLLAKAKEELEAEKRELV
RTLEKRSLEVEHLNDDFRQLNDKLVEVNTSKMALQMKLDELESAEVNIKYKEKRMNQEKE
LLNGQTSWLKEELKAKSEELLSLSRQKGNEILELKCNLENKEDELNRLQEQVASLKTSNE
RHQKQNEDMISKLKEAKEQQATMEEKFRNELNANIKLCNLYKGASADSEAKSEELSRAVE
ELHKLLKDAGEANKAFEEKLQEMNGATDKSVAELKERIQSLEKELENANELLSSSKLRGP
IGTTSVIAEEQMTTMSPTAAAVSKIKPNMKLTELYTAYVDTQEQLQMERLENKRVNKYLD
DIVQEVEAKAPILKRQRDEHERMQKSVASLSAKLEQAVKEVHRLQKEADEANKRSSVLER
GNQRCELQLGDMAQQVRVLLIELEEARGNHVMHEEEVSSADISSTSEVISKHLVTFRGVE
ELQKQNQRLLVALRELSDAQEKEELEAAGNKRGELEQSFDKAHLELESLKEQRSQQVKMT
ESIVRQRDMYRMLLAQATGVSFPQQGALPEEFSLTSTPRRSPAAKPNTGTPTALVSMTTE
SAEALEAKAALRQLQEVFSAYKKERMEGSKVMTEQNEKLQEQLSDLHSQNAKISTQLEFA
SKRYEMLQDNVERYRTEIASLREKGQKMSTATQKHEQTIHTLNEDLKAAKEKLAMAEGQT
ESLRKERETLKLVESQLNLEKESILSQQQSQNLLLTNLQAIQDTLKRSETETHKRLNGQL
EKQEREISQLQKRLEHEVEQRHLLVRNQEVRLLTSQCQLLEKQGLIHQTTKELLNAAELE
LNTLKLQLGSGEARHALSSPTTPIIRGLPGSNQDREDLQGRLRAAEYRAEELAESLRVAT
SSIEQYRTMAQSLEESLNKEKQVTEQARSSIEVRMKEAEQEHHRLEEKLLEAEKEKHNSE
EQKRRALASLEEQINSLRGSLSSTQADHQAVLERVIVAEAQQQQALQDSQEQAKLAAEAQ
DKYEREMILHAADVEALQAAKAQAIQAIEFRQQLDERAQRVSAELLEARVSWGEQEKILK
EEMSKMESRYEDFQRQNTLLHEQIQAISSKMADKLQHAASESPLNISLTEEGKSQDQILE
ILRFVRGEKEISESRFEVAQGESLRYRLRVEHLERELKEAQDSLSAAKERMQVTTKTLAQ
HDELMKKTETMSILMETNKMLREERDKMEQELHQTQDKVQKLESDIMPLQQANSELSEKS
GMLQAEKKILEEEIRRWKARTQHLVSQQKDSDPEESKRLHSEKEAHLKRILQLTEENSKL
KAEVARTNNLTTSLQSQVQNLRDNMSKINDERNVLKKEVETKNQELQEKVQTITQVKKIG
RRYKTQYDDLKVEHDKLVAEAAAVPSQEEEARQASVQELQSLKDSLNQAETKTRELEGQL
ENINKVAAERETEGRNAQEQSTRLQTELNRIRQELQDKVSQEDTLRQQMTDKEDKTRKAI
VYAKQKINLLTSTKDKLQRENEELKQQQEELKQQREELEVRVSALKSQYEGRLSRQEREL
RDLRGQQERQEQRDEPPEAGPSKTQEQQRGTEQRQISLKTTPAADRGSASTSETPTANIK
PTPVASASKQPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVETQEAMQSTEGP
PVEHVTVYGSASGSVRSASPNVQTTLASPMLTGQQSQTQATAFVQPTQQQSMTHAEPANQ
EPPPMVIEATPSSQVEWPSTSSTSSVFGTVSATPGTSSMSKRPREEEEIAPVLPDTESTQ
EDTSRAPIPKKLRIIQRVGPEEEVLVEDSAEAEGVVLTDSQDGAEASQEEFPVLEEGDAA
TQSIMMDQELTLSQSDAPHLLQQEVIVIITDTESDDDQEEEEEEEEEEQDYDEEEEEEEE
EQEEGEEEEEEEEEEEDDEDDREMGEEGEDSNEGSGDGNEAYEDDDDAKGADVTDPGTET
EESLGASDSTQRPADSQTPSFDSSTMEAYSIEQPITSSGTRMPQSPRRPTHQLPSRLNIA
PTSELGPPSQRIPVRRQSVGRVPQLTAGVPGTSQHVCDDDDRTVPSTPTLVWPQRSDASD
QSILSPQVAGVPRFRYGLSEDAPQTSSSSDLGQLSSQGGLGIYESPLFLATHEESGGRSF
PTTPLQVATPVAIVSEVAQSDTTSELASQSVPMVSTSTPGLVVPGAPCPGEDRDDVFLEP
DTDGPSADVSVDPGVSQGDLEEPGQQSDKACLPSTSQEPSSSSADTSSAPPKPSRPGTSR
QLQRWPEHRGGRMKRGQGFPSRGVHGRRFVR
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgcccctgcaagagttggaaggttcagagatagctaagcttgaaaagatc
atttcggaccagcaatataatatcgattgtctaaaagcccaacaggaacgacatcgggtt
gacagcgaacaacaattctttgaaaaaaaaaaccaacttgctcagtgtcaagaggacttt
ttgtcgcagacccaagagcattttaatctcaaagaggagttcagaaaacaagaggaggat
ctcaaacgtgtgcgtgaggagaatggagaatatgaatccgcacaagcgaggctgtcatct
gagcagacactgctggcaaaggctaaagaggaactggaggcagaaaagcgagaacttgtt
cgaacactggagaaaagatctttggaagtggagcatttaaatgatgacttcaggcaactc
aatgacaagttggtggaggttaacacctctaagatggccctgcagatgaagttggatgaa
cttgaatcggctgaagtcaacattaaatacaaggagaaacgtatgaaccaagagaaagag
ctgctgaatggtcaaacatcttggctgaaggaggaattgaaggctaagagtgaagaactg
ctgtcgctgtcccgacagaagggaaacgagatactggaactaaaatgcaacctcgagaac
aaggaagatgagttgaaccgactccaagagcaagtggccagtttgaagacatcaaatgag
cgtcatcagaagcagaatgaggacatgatcagcaaactgaaagaagccaaggaacaacaa
gccacgatggaggaaaagttcagaaacgagctgaatgccaacattaagctttgcaatcta
tacaagggagcatcggcagattctgaggcaaaaagtgaagagctgagtcgggcagtggag
gagctgcataagttgctgaaagatgctggagaagccaacaaggcctttgaagagaagttg
caggagatgaatggtgccacagacaagagtgtggctgagctaaaagaaaggatccagagc
cttgagaaagagttggaaaatgctaatgagctgctatcaagttctaaacttagaggtccg
attggtacgacatctgtgatcgcagaagagcaaatgacgactatgtccccaacagctgcc
gctgtatccaaaataaagcccaacatgaagttgacagagctgtacaccgcatatgtggat
acccaggagcagctgcagatggagagattggagaataagcgagtcaacaagtacctggat
gatattgtgcaagaagtggaagcaaaagccccaatcctcaaacgacagagggacgaacac
gagcgcatgcagaagtcagtggccagtctttctgccaagctggagcaggctgttaaggag
gtgcatcgtctgcagaaggaagctgatgaagctaacaagcgctcctctgttctggaaagg
ggcaaccagaggtgtgaacttcagcttggagacatggctcaacaggtgcgtgtgctgctc
atcgagctggaagaggctcgtggaaaccatgtaatgcatgaggaggaggtgagctcagcc
gacatcagcagcacatcagaggtgatcagcaaacacttggtgaccttccgtggtgtagag
gagcttcagaagcagaaccagcgtcttctggtggccctcagggaactcagtgatgctcag
gagaaagaggagcttgaggccgctggcaacaaacgtggtgaactggagcagagttttgac
aaagcccaccttgagctggagtccctgaaggagcagcgcagccagcaggtcaagatgact
gagtccattgtgaggcagagggacatgtaccgcatgctgctggctcaggcaacaggagtc
agcttccctcagcagggtgcattacccgaggagttctctctaacctccaccccccgacgc
tcacctgcagccaaacccaacacaggaactcccactgcacttgtctccatgacgaccgag
tctgctgaagccttggaggccaaggcagctttgcgccagttgcaggaggtattttccgcc
tataagaaggagcgcatggagggtagcaaggtcatgacggagcaaaacgagaagctccag
gagcagctctctgacctccactcccagaatgcaaagatatccacccagctagagtttgcc
tctaaaaggtatgagatgcttcaagacaatgttgagcgctacaggacagagattgcttcc
ctccgagaaaaaggacaaaagatgtccactgccacacagaagcatgagcagaccatccac
acgttgaatgaggatctgaaggctgccaaagagaaactcgccatggctgagggccagact
gagagtctacgcaaggaaagagaaacgctcaagctggtggagtcccagctgaacctggaa
aaggagtcgatcctcagccaacaacagagccagaatctgctgctgaccaacctccaagct
attcaggacactcttaagcgttcagagactgagacacataagcgtctcaatggccagttg
gagaagcaggaacgagagatctctcagctgcagaagaggctggagcacgaggtggaacag
cgccacctgctcgtcagaaaccaggaagtccgtttgcttacctctcaatgtcagttgctg
gagaaacaggggctgatacaccagacgaccaaggagctgctgaatgctgccgagctcgag
ctcaacaccctcaagctgcagttgggcagcggtgaagcgcgtcacgctctgagctccccc
accacgccaataatcagaggtctgccgggttcgaatcaagacagagaggacttacagggc
cgactgcgggcggccgaataccgggcggaggagcttgcagagagcctccgtgtagccacc
tccagcattgagcagtacagaaccatggctcagagcctggaagagtcccttaacaaagag
aaacaggtaacagagcaggcacgctcatccattgaagttcgtatgaaggaggctgagcag
gagcaccacaggctggaggaaaagcttctggaagcagagaaggaaaaacataattcagag
gagcagaagaggagagccctggcatcattggaagagcagataaacagtctgagaggaagt
ctgagcagcactcaggcagatcaccaggctgtgctcgagcgcgtgattgtagctgaagcc
cagcagcagcaagctctacaagacagccaggagcaggccaagctggcagctgaagcgcaa
gacaagtatgagcgggagatgattctgcatgcggcagatgtcgaagcactgcaagctgct
aaagctcaggccattcaggccatcgagtttcgacaacagcttgatgagagagcccagaga
gtctctgcagagctactggaggccagggtctcctggggagagcaggaaaaaatcctcaag
gaggagatgtcaaagatggagagccgctatgaggatttccagaggcagaacacgcttttg
catgagcagatccaggcaataagcagcaagatggctgacaagttgcagcatgctgccagt
gagagtccactgaacatctctctgactgaagagggcaaatctcaagaccagatccttgag
attctcaggtttgtacgcggagagaaggagatttccgaatcgcgttttgaggttgctcaa
ggggagagtttgcgttaccgtttgagggtggagcatctggagcgtgagttgaaggaggcg
caggacagcttgagtgctgcaaaagagaggatgcaggtgacaacgaagaccctggctcag
catgatgaactgatgaagaagaccgaaacaatgagcatcctgatggagaccaacaagatg
ctgcgagaggagcgagacaagatggagcaagaactgcaccaaactcaggataaggtacaa
aagctggagtcggacattatgccactgcagcaggccaactccgagctgagcgagaagagc
ggcatgctgcaggctgagaagaagatactcgaagaggagatcaggcgctggaaagctcgg
acccagcatttggtgagccaacaaaaggattcagacccggaggagtccaagcgtctacac
tctgagaaggaggctcatctcaaacgcatactgcagctcactgaggagaactccaaactt
aaagcagaggtggccaggaccaataatctcacaacatccttgcaaagccaggtacagaac
ttgcgtgacaatatgagtaagataaatgatgaaagaaatgtgctgaagaaggaagtggag
accaagaaccaagagctccaggagaaagtacaaactatcactcaggtcaagaagattgga
cgccgttacaaaactcagtatgatgatctcaaggtggaacatgacaagttggtagccgag
gccgcagcagtgccatcccaagaagaggaggctcgtcaagcctcagttcaggagctgcag
agtctcaaagattctctgaaccaggctgaaaccaagaccagagagctggaaggacaactg
gagaacatcaacaaggtggctgcagagcgtgagactgaagggcgtaatgcccaggaacag
tcaaccaggctgcagacagagctgaacagaataaggcaggagctacaggataaagtctct
caggaggacacgctgagacagcagatgactgacaaagaggacaagaccaggaaggccatt
gtctatgccaagcagaagataaacctgctcaccagcaccaaagacaagctgcaaagggaa
aatgaagagctaaagcaacagcaggaggagctaaagcaacagcgtgaggagctggaggtt
cgagtcagcgctctcaagtctcaatatgagggccgcctgagtcgacaggagagagaactg
cgagacctgcgaggtcagcaggagaggcaagagcagagagatgagccacctgaggcaggt
cccagtaagacccaggagcagcagaggggcacagaacagaggcagatcagtctgaagaca
accccagctgcagaccggggcagtgccagcacatctgagactcccactgccaacattaag
ccaacacctgtggcttcagcaagcaagcagcctgtcaacccgggaaacaaacccactccg
agagcaagcatcaggcccatgattaccccagctactgtgcccaccccaacacccacggcc
accgtcatgcccaccacgcaggtggagacccaggaagccatgcagtctactgaaggcccc
ccagtagagcacgtgactgtgtacggaagtgccagcggctcggtgcgctctgccagcccc
aacgtccagaccactttagcaagccccatgctgacggggcagcagagccagacgcaggcc
accgcttttgtccaaccaactcaacaacagagcatgacccacgcagagccggcaaatcag
gagccgccacccatggtcattgaggcgacacctagctcgcaggtggaatggccttcaacg
tcctccacctcctccgtgtttggaaccgtttcagcaacaccaggaacctcgtccatgtca
aaaagaccccgggaagaggaggagattgcccctgtgcttcctgacacagagtccacccag
gaggacacctccagggctcctattcctaaaaagctgcgtatcatccagagagttggtcca
gaggaggaggtgctggtggaagacagtgcagaggccgagggggtggtgctaacagacagt
caagacggagcggaagcaagccaggaggagtttccagtactggaggagggtgatgcagcc
acccagtccatcatgatggaccaagagcttaccttgtcccaaagtgacgccccccacctg
ctacagcaggaagtaatcgtcataataacagacacagagagtgacgatgaccaggaagag
gaggaggaagaagaggaggaggaacaggactatgatgaagaagaggaggaagaagaagaa
gaacaggaggagggggaggaagaagaagaagaagaggaggaggaggaggatgatgaagat
gacagggagatgggggaggaaggagaagacagtaacgaggggagtggagacggcaacgag
gcctacgaagacgacgacgacgcaaagggagctgatgtaactgacccaggcactgaaacg
gaagagagtttgggggcgtctgactccacccagaggccggccgattcccagacacctagc
tttgacagcagtacaatggaggcatactctatcgaacaacccatcacaagctctggtaca
cggatgcctcagtcgccacggagaccgacacaccagctgccctctcgcctgaacattgcg
ccaacatcagaactgggaccaccttcacagcgtatccctgttcgccgccagtcagtcggc
cgggtcccgcagctcactgccggcgtgccaggcacttcccagcacgtctgtgatgatgat
gaccggacggttcccagcactcccactctggtgtggccacagcgatccgacgcttcagac
cagtccatcctttctccccaagtagccggcgtgcctcgcttcaggtacggtctttcagaa
gatgcgccacagaccagctcctcttcggacctgggacagctctcctcacaaggaggtctg
ggaatttatgaaagcccgttgttcctagcaactcacgaagagtctggtggacgcagcttt
cccaccacaccgctacaggttgcaacaccagtagcaatcgtctcggaagtggctcagtcg
gacaccaccagtgagcttgcctcccagtcggttcccatggtgagcacgtccacacccggc
ctggttgtgccaggagctccgtgcccaggggaggacagagatgacgtctttctggagcca
gacactgatgggcccagtgcagatgtttcggtagacccaggggtctcacagggagattta
gaggagccaggccagcaatctgacaaggcctgcctcccctccaccagtcaggagccctcc
tccagctctgcagatacaagcagtgcaccacctaagccctctagacctggaaccagcaga
cagctgcagcggtggccagaacaccgtggtggccgcatgaagagaggtcagggatttcct
tctcggggtgttcatgggagacgattcgtgagatga
DBGET
integrated database retrieval system
