Gasterosteus aculeatus (three-spined stickleback): 120823845
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Entry
120823845 CDS
T07457
Name
(RefSeq) ELAV-like protein 1 isoform X1
KO
K13088
ELAV-like protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120823845
03041 Spliceosome [BR:
gat03041
]
120823845
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120823845
mRNA cycle factors
Stress granule specific factors
120823845
Spliceosome [BR:
gat03041
]
Common components
Common spliceosomal components
General mRNP proteins
120823845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
BRAP2
RRM_occluded
RBD_DEAH11
RRM_3
RBD_DGKtheta
RRM_DEAH11
YqeY
Motif
Other DBs
NCBI-GeneID:
120823845
NCBI-ProteinID:
XP_040040196
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Position
8:complement(18448176..18454114)
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AA seq
359 aa
AA seq
DB search
MALRRGHIRYLKVCEVQTSQNDVRDGQHASKGASGKELYDNGYCEQMMEDDDSRTNLIVN
YLPQSMSQDELRSLFSSVGDVESAKLIRDKVAGHSLGYGFVNFVNPNDAERAISTLNGLR
LQSKTIKVSFARPSSDMIKDANLYISGLPRTLSQQELEDMFTRFGHIINSRVLVDQASGL
SRGVAFIRFDKRSEAEEAVKHLNGHTPPGSAEPITVKFAANPNQARNSQMMSQMYHGQSR
RFGGPVHHQAQRFRFSPMSVDHMGGGGGVSGSPSGGWCIFIYNLGQDADEAILWQMFGPF
GAVVNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIHSLNGYRLGDKVLQVSFKTSKGPM
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaagacgaggacacatcaggtacctgaaggtgtgtgaggttcagacgtctcag
aatgatgtcagagatggtcagcacgcctccaaaggagcctctggaaaggagctgtacgac
aacgggtactgcgagcagatgatggaggacgacgactccaggaccaacctgatcgtgaac
tacctgcctcagagcatgagtcaggacgagctgcgcagcctcttcagcagcgtgggcgac
gtcgagtccgccaaactcatccgggacaaagtagcaggccacagtttaggttacggcttt
gttaactttgttaaccctaatgatgcagagagggctatcagtaccctcaatggcctgagg
ctacagtctaaaactatcaaggtctcgttcgcgcggccgagttcggacatgatcaaagat
gcaaatctgtacatcagcggactgccgaggacgctgagtcagcaggaactggaagacatg
ttcacccgctttgggcacatcatcaactccagagtgctggtggaccaggcctcaggtctc
tctcggggcgtggccttcatccgcttcgataagaggtccgaggccgaagaagccgtcaag
cacctgaacgggcacacgcccccgggcagcgccgagcccatcacggtcaagttcgccgct
aaccccaatcaggcccggaactctcagatgatgtcacagatgtaccacggccaatcgcga
cgcttcggcggccccgtgcatcaccaggcgcagaggttcaggttttctccaatgagcgtc
gaccacatgggcggagggggcggagtctcggggagcccctccggcggttggtgcatcttc
atctataatctgggccaggacgccgacgaggcgatcctctggcagatgttcgggccgttc
ggtgccgtcgtcaatgtgaaagtgatcagagatttcaacaccaacaagtgcaaaggcttc
ggtttcgtcaccatgacgaactacgaggaggccgccatggcgatccacagcctcaacgga
taccgactgggggacaaagtcctgcaggtttccttcaagaccagtaagggaccaatgtag
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