Gasterosteus aculeatus (three-spined stickleback): 120823856
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Entry
120823856 CDS
T07457
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120823856 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120823856 (rubcn)
Membrane trafficking [BR:
gat04131
]
Autophagy
Other autophagy associated proteins
Others
120823856 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
LRRFIP
Motif
Other DBs
NCBI-GeneID:
120823856
NCBI-ProteinID:
XP_040040211
UniProt:
G3P350
LinkDB
All DBs
Position
8:complement(12499918..12517719)
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AA seq
969 aa
AA seq
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MEVSAEGEAEERRRDHWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMNNILSHGL
KNEQVYYKKRDYWPFVWCVRYISPHLASHVEQFSQLQPVLSSGMQQSTGGESYKAERWLL
HSLQVHLLSAQLRPLLRHLGHTRKYYNEDAFLLSEPHVTAMFQCLEAVEQNNPKLLAQVD
AFGLSPLKGPPCLGLLKSQSLCVLPGPGAVWRNADSAPTRESLNRRLTTSFCSLKETVAA
SHNSGNTTGGGSQNNNGNCTNTSFPASSRGAPCVSKPGESGRGGTPPPGSVSVPSISLSK
PPSSPSLQPEAGDSGDGDYDDGPEYLAIGNLGQRSRSDSPNSTDSSEQGVAPALAPPPHR
RSSFSAGQRGPGRAPRGHTRSFSDTGVSQKMKNGGGHRKITIIIEDPVAESVGDDCGTTN
YSPFSPPSEETSSSSSLYMESHVSQVNSVPDGMFRKPSQGQSLISYLSEQDFGSCADLEK
ENAHFSISESLIAAIELMKYNLRRQEEEGEEEGDSDSEIQQLKQKIRLRRQLIRRSRVPP
CANSHIVHSTDSGGSRRSSQDSYQGLSDSGSAEEVEECELRDGCEGQSLLAVSQNGLSLS
LASLFSDADIKRSVSSSSRSFLSSESISPSYLQSNSAESVAMGLLRQFEGMQLPAASELD
WLVAEHDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIHSAPK
RKILVVKQNYRCAGCGTRIDPDYIKRMRYCEYLGRYFCQCCHENAQAVVPGRVLRKWDFS
KYYVSNFARDLLSKIAGDPLFNPSDINSGLYKKVKALEVVRVLRVQLFHMKNLFKTCRFA
KEVLEQFDSLPGHLTEDLHLFSLSDLSAVRSGEMAPRMKELLKLGTAHVAGCVLCQAKGF
VCEFCSNDKDIIFPFQLNKCQRCEECHACYHSGCFRPRKDCPRCRRLAERRERMARKNME
EQEDEGGGP
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtctgcggagggagaggcggaagagcgccggagggatcactggaagctgctc
tccagcctaaagaccacagtggagggtctcgtgtccaccaacaatcccaatgtgtggtca
cgttatggcggcttgcagcgccttcacaaggacatgaacaacatcctgagccatgggctg
aagaacgagcaggtgtactacaagaagagagactactggccgtttgtgtggtgcgtgcgc
tacatcagcccccacctcgcctcgcacgttgaacagttcagtcagctgcagccggtgctg
agcagcgggatgcagcagagtaccggcggcgagagctacaaggccgagcgctggctcctc
cacagcttacaggttcacctgctgtcggctcagctacgacctctgctccggcacctgggg
cacacacggaaatattataatgaggatgcctttctgctgagcgagccccatgtgaccgcc
atgttccagtgtctggaagctgtggagcagaataaccccaagctgctggcccaagtagac
gcgttcgggctgtctcctctgaagggcccaccatgtctgggccttttgaagagccagagc
ctgtgtgtgttacctgggcccggcgccgtttggaggaacgctgactctgctcccacaaga
gaatctctaaatcgcagactcaccacctccttctgctccctcaaagaaacagtcgccgcc
agccacaactctgggaacacgacaggaggtggatcccaaaacaacaacggcaactgcaca
aacacttcctttccagccagcagccggggagctccgtgtgtgtccaagccaggggagagc
gggaggggtgggacaccccctcctggctccgtctcggtccctagcatctcgctctcaaag
cccccctcgtccccctcccttcagcctgaggccggggactctggtgacggcgactacgac
gatggtccggagtacctggctattggtaacctggggcaacgcagccgctctgactctcca
aactccaccgacagcagcgagcagggcgtcgccccggccttagctccgcccccacacagg
cgctcgtctttctcagcgggccagagggggccgggccgggcgcccaggggacacacccgc
tcattttctgacacaggggtcagtcagaaaatgaagaacggagggggccaccgaaaaatc
accataataatagaagatccggtagcagaatccgttggggacgactgcggtacaacgaat
tacagccctttctcgcctccctctgaagaaacaagctcttccagttccctctacatggag
tctcatgtgtcccaggtcaacagtgttcccgatgggatgttcaggaagccgtcgcagggt
cagagcctcatcagctacctgtcagagcaggactttggcagctgtgctgaccttgagaag
gaaaatgctcatttcagcatttcagagtccctcattgctgccatcgagctgatgaagtac
aacctgcggcgtcaggaagaggagggcgaggaagagggagacagcgactctgagatccag
cagctcaaacagaagatccgactgcgcaggcagctgatcagacgcagtcgtgtgccgcca
tgcgcaaactcccacatcgtccactccactgacagcggaggctccaggaggagctctcag
gactcctaccagggcctctctgactccggctcggctgaggaggtggaggagtgcgaacta
cgagatggctgtgagggtcagtccctgctggcggtgtctcagaacggcctctccctgtca
ctcgcctccctcttctcagatgcagacattaagcgcagcgtaagctccagcagcaggtct
tttctcagctccgagtcaatctctccatcctacctccagtctaactctgctgagtcggta
gccatgggcttactcaggcaatttgagggcatgcagcttcctgcagcctctgagctcgac
tggctggtcgcggaacacgacgctccacagaagctgctgcccatccccgactctttgccc
atctcgcccgatgatggcgaacacgccgacatctacaagctgaggatccgggttcggggt
aacctggagtgggcgccgccccgaccgcagataatcttcaacattcattccgcccccaag
aggaagatccttgtcgtgaaacagaactaccgctgcgctggctgtggtacccgcatcgac
cccgattatatcaagcgaatgcggtactgcgagtacctcggacgttacttctgccagtgc
tgccatgagaacgctcaggccgtggttcccggccgagtgttgaggaagtgggacttcagc
aagtactacgtcagcaactttgcccgggacctgctaagcaagattgcgggagacccgcta
ttcaaccccagtgacatcaacagcggcctgtacaagaaggtcaaagctctggaggttgtc
cgggttttgagagtgcagctgttccatatgaaaaacctcttcaagacctgtcgctttgct
aaagaggtgctggagcagtttgacagtctgccaggtcacctgaccgaggaccttcatctc
ttctccctcagtgacctcagtgccgtgcgcagcggggaaatggctcccaggatgaaagag
ctgctcaaacttggtaccgcgcacgtagccggctgtgtgctgtgtcaggcaaagggcttc
gtgtgcgagttctgcagcaacgacaaggacatcatcttccccttccagttgaacaagtgc
cagcgctgcgaagagtgccacgcgtgctaccacagcggctgtttccgcccgcgcaaagac
tgccctcgatgccggcggctggcagagcgcagagagaggatggcgcgcaaaaacatggag
gaacaagaggacgagggaggcgggccctag
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