Gasterosteus aculeatus (three-spined stickleback): 120824179
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Entry
120824179 CDS
T07457
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120824179 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120824179 (taf4b)
03036 Chromosome and associated proteins [BR:
gat03036
]
120824179 (taf4b)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120824179 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
120824179 (taf4b)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120824179 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
DUF3106
Motif
Other DBs
NCBI-GeneID:
120824179
NCBI-ProteinID:
XP_040040756
LinkDB
All DBs
Position
VIII:1373955..1386192
Genome browser
AA seq
706 aa
AA seq
DB search
MVVESQKMDSCGAAGSADNSIQVKRLQVPAKWFPVPAVSPPPTAAGSSKGIFVYDPSKVL
PVGHIHQPSTSTAPEPGRLTSSPSVMVVAKVAPSGGVAIKGTSHATRPPLSHVVSLNQTT
TPGRTVVITVPRAAGSQTVPVAPRLPHTGPPQLPANIQIPPGMMLIRSDSGQLMLVSQQA
LAQAQQAPRGVCGQAPRILIPQVSSAAGNKNHEKVTVIRMTAPPAFHPAPVQKTAVVKVN
GETPKPAVVQALSAVSDRGSQPLVHTVITEPKKETAASVSQQATLESVKKCKNFLVTLIK
LASSDSRSANMANNVRGLVRSLLEGKLEAEEFTEQLYRELKSTPQPCLVPFLKKSLPAVR
RLTADPHLFIQQASTSTGNLTKPPSSTTTGQPFSTSQQLIKQPPGVTLRPGMTTLVQSRN
YILKSSRPIPKQVVVQSGKPLAGLLSLKQPFTQEPPHSIKFAFKDSSGSYKEDDDINDVA
SMAGVNLREENARILTSGVGSVVQSCQDQLFLSPSLVLSRILLSGRAFAVTDVGPNVVAL
VSHATQECLRGLLEKLTVMAEHRKAGLKEDLWHAKVSDVRSQLRFLEEVESLKKKRRDEE
EREHMLRLARSRSHTEDPHQQQLKQRAKELQQMEEAQLQQREANLAALAAIGPRKKRPLE
PNASQVTLLPRPAVERVTRVMLRDLLLCMEQHHFLCHSLSLYRAML
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggtagtagaatcccaaaagatggattcctgtggggcagcaggaagtgccgacaactcc
attcaagtaaagcgattacaggtcccagctaaatggttccccgtccctgctgtgtcacct
ccaccaactgctgcaggctcctcaaaggggatctttgtctatgatccgtctaaagtccta
ccagttggacatatccaccaacccagcacctctacagctccagaaccagggcgcctgacc
tcctccccttctgtcatggtggtagcaaaggtagccccctcaggaggagtggccattaag
ggaacatcgcatgcaacaagaccacccttgagccacgtggtctccttgaaccagaccacg
accccgggaaggacagtggtgataaccgtaccaagggcagcgggttcacagacggtgcct
gtggccccccgactgccccacaccggccccccacagctgccagccaatatccagatacca
cccggtatgatgttgatccgcagtgacagtggtcagctgatgcttgtatcccagcaggct
ttggcacaggctcagcaggcaccgagaggtgtctgtggtcaggcgcctagaatactgatc
ccacaggtatcttcagcagctggaaataaaaaccatgagaaggtgaccgtgatcaggatg
accgcccctcccgctttccatccagcaccagttcagaagactgctgtggtaaaggtgaat
ggtgagactcccaaaccggctgtagtccaggcgctcagcgctgtgtctgatcgggggagc
cagcctctcgttcatacggtcatcacagaacccaaaaaggagactgcagccagcgtcagt
cagcaggcgaccctggaaagtgtaaagaagtgcaagaacttcctggtgactctgatcaag
ctggcctccagtgactccaggtcagcaaacatggccaacaacgtcagaggactggtcagg
agtctgctggaagggaagctagaagcagaggagttcacagaacagctttatcgcgagttg
aagtccactccccagccctgcttggtgcctttcctcaagaaaagtcttcctgcagtgcgt
cgcctcactgcagaccctcatctattcatccaacaggcttcaacttctaccggcaacctc
accaagccacccagcagcaccaccacaggacaacccttcagcaccagccagcagcttatc
aagcagcctccaggagtgactctgagaccaggcatgacgacattagtccagtccagaaat
tacatactgaagagcagcagacccatccccaaacaagtagttgtccagtcgggaaaaccc
ttagcaggactgttgtcattaaaacaacctttcactcaggaaccacctcattctatcaaa
tttgcattcaaggacagttcaggatcgtacaaagaggacgatgacatcaacgacgtagcc
tccatggctggagtcaacctgagggaggagaatgcacggattttgacctccggggtgggc
tctgtggtccagtcatgccaggatcagctcttcctctcaccaagcctggtgcttagccga
atcttgctctcaggacgggcatttgcagtaaccgatgtgggtcccaacgtggtggctctg
gtgtctcatgccacgcaggagtgtctccgtgggctgcttgagaagctcactgtgatggca
gaacatcgcaaggccggcctgaaggaggacttgtggcatgccaaagtcagtgacgtgcgt
tcccagcttcgcttcctggaggaagtggagagtttgaagaagaagaggagagatgaggag
gagagagagcatatgctgcgactcgccagaagtcgctcacacacagaggacccacatcag
cagcagctgaagcaaagagccaaagagttgcagcagatggaagaagctcagctccagcag
agagaagccaaccttgccgctctggctgccatcgggcctcgcaagaagagacctctggag
cccaatgcgagccaggtgaccctgctgccccgaccggctgtggagagggtcacccgggta
atgctgagggatctgctgctgtgtatggagcagcaccacttcctgtgccactctctctct
ctgtacagagcaatgctctga
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