Gasterosteus aculeatus (three-spined stickleback): 120824227
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Entry
120824227 CDS
T07457
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120824227 (lingo3a)
Membrane trafficking [BR:
gat04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120824227 (lingo3a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_EndoS
LRR_9
LRR_RPS2
LRR_6
Cupin_1
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
120824227
NCBI-ProteinID:
XP_040040832
UniProt:
A0AAQ4QDX3
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Position
VIII:17219614..17246867
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AA seq
611 aa
AA seq
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MGTRPGRDELGWLPPFLVLLLMSTVSPAQSQGCPQRCDCFAKLKTVSCFGKRLSSLPDGI
PLDTKVLDLSGNKLRWVEQSDLLSYPRLEKLDLSDNMVSSLEPNAFSSLQNLRSLSLRGN
QLKLVPMGAFSRLSNLTSLDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLG
LVGLRELTIERCNLTSVSSQSLSYLQNLVDLRLRYLSISTLEDQNFRKLANLRGLEIDHW
PFLEHVPPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSYNPISVLESWALRD
LIRLKELHLVNTNLAVVQPYALGGLRQISLLNLSTNGLVSLEEGAFQSVNTLETLRLDGN
PLACDCRLLWILQRRKTLNFDGASPVCMSPVEVQGRALNAFSDSALFDHFTCQKPKIRNR
KLQQVSAREGQVVSFVCRAEGEPAPVIFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQV
TDSGTYICIASNAGGNDTYFATLTVSGLPLDAALLANRTYYAGDLNDTNLNDTRVFLKFT
LDLKTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQ
GGARKFNMKMI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggggacgaggccgggccgggacgagctgggctggctcccgcctttcctggtcttgcta
ctgatgagcacggtgtcgcccgcccagagtcaaggatgtccccagcgttgcgattgtttc
gccaaactcaagactgtgtcctgttttggtaaacggctgtcctcgctgcccgacggcatc
ccgctggacaccaaggtcctggacctgagtgggaataaactccgctgggtggagcagagt
gacctgctttcatatccacgtctggaaaaactggacctgagtgacaacatggtcagcagc
ctggaaccgaatgccttttccagtctgcagaacctgcggtcgctttcactgaggggcaac
caattgaaactggtccccatgggggctttctcccgtctgtccaacctaacatcactggac
ctcagtgggaataagattgtcattcttttggactttactttccaagacctgaaaagtttg
aaaaaccttgaagttggagacaatgacttggtttatatttccaacaaagccttcctgggt
ctggtggggctgagggagctgaccatcgagaggtgcaacctgacttctgtgtccagccag
tctttgtcctacctgcaaaacctggtggatctgcgcctccgctacctcagcatctccacc
ttggaggaccagaacttccgtaagctggcaaacctgaggggcctcgagatcgaccactgg
cccttcctggagcacgttccccctcacagcctgcaggggctcaacttatcttggctgtct
attactcacactaacatcacctctgtgcccacctccgccctccgcagtctggctcacctc
accagcctcaacctctcgtacaaccccatctccgtgctggagtcctgggccctgcgggac
ctcattcggctgaaggagctgcatctggtcaacacaaatctggcggtggtgcagccgtac
gcgctgggcggtctgaggcagatcagcctcctgaacctctccaccaacggcctggtgtcc
ctggaggagggagcctttcagtccgtcaacactctggagacgctgcgtttggacggaaac
cctctggcctgcgactgccgcttgctgtggatcctccagcgccggaagaccctgaatttc
gacggcgcctcccctgtgtgcatgtcgcccgtggaggtgcagggacgggccctgaacgcc
ttctccgactcggccctcttcgatcacttcacttgccagaagcccaaaatccgcaacagg
aaactgcagcaggtctcggcccgcgaggggcaggtcgtgtcgttcgtttgcagagcggaa
ggcgagccggcgccggtgatattctggatctcgccccagcgccgccgcatcaccacaaag
agcagcggccgcctgacggtgttaccagagggcacactggagatacggtacgcccaggtg
acagacagcggcacctacatctgcatagccagcaacgcgggcggaaacgacacctatttc
gccacgctcacggtcagcgggctgccgctcgacgcggccctgctggccaaccgcacgtac
tacgcgggcgacctcaacgacacgaatctgaatgacaccagggtcttcttgaagttcact
ctggacctcaagaccatcctgatatccacggccatgggctgcatcatgttcctgggggtg
gtgctcttctgtttcatcctgctgttcgtgtggagtcgagggagaggccagcacaagaac
aatttctccgtggagtattccttcaggaaggtggacggacccgccgccagcggagggcag
ggcggcgctcgcaagttcaacatgaaaatgatttga
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