Gasterosteus aculeatus (three-spined stickleback): 120824242
Help
Entry
120824242 CDS
T07457
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120824242 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gat03310
]
120824242 (rorca)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120824242 (rorca)
Nuclear receptors [BR:
gat03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
120824242 (rorca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120824242
NCBI-ProteinID:
XP_040040853
LinkDB
All DBs
Position
VIII:complement(16674202..16681182)
Genome browser
AA seq
505 aa
AA seq
DB search
MFQLLLYSATVTKRHCYFTAGWFMKMQIHPAQIEVIPCKICGDKSSGIHYGVITCEGCKG
FFRRSQQNNATYSCSRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDS
LYAEVQKHQQSQECTGLLGVCERGDGDAPDHGRACRRSSTAAPFGDPDDISMLPEGLLFD
LPLTLEDAAEDYCRLDVPGGSAGSTSSSQSSPEQTHLDFVDGNIGIKHEYQLLHDSGLFS
HAILNPLPEGCTLLEIEHITQSVLKSHFETSRYSTEELNRMAWTSDSPEETRAYQTKSAE
AMWQQCAIQITNAIQYVVEFAKRIYGFMDLCQNDQIILLKAGCLDVLLIRMCRAYNPINN
TMLFDGKFTAAHLFRALGCDDLVSAVFDLGKSLSCVQMSEEEMALFSAAVLLSPDRAWLT
DVEKIQKLQEKVYVALQFCLQKEGGAEEKLAKMVSKLPIMKSICDLHFEKLEFFRMLHPE
TAYTFPPLYREVFSSEITFPDSTQG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttccagttacttctctatagtgcaactgtgaccaagcgacattgttattttactgcg
ggctggtttatgaagatgcaaattcacccagctcaaatagaagtgattccctgtaaaatc
tgtggggacaaatcctcagggattcactatggtgtcatcacctgtgaaggctgcaagggc
ttcttccggcgcagccagcagaacaacgccacgtattcctgctcacgacagaggaactgt
ttaatcgaccggaccaaccgtaaccgctgccaacactgcaggctgcagaagtgcctcgca
ctgggcatgagccgcgacgcggtcaagttcggccgcatgtccaagaagcagcgcgacagc
ctgtacgcagaggtccagaagcaccagcagtcccaggagtgcacggggctgctcggcgtc
tgcgagcgaggggacggcgacgcgcccgaccacggccgcgcctgccggagaagctccact
gccgcgccgttcggcgacccggacgacatcagcatgctgcccgagggccttctgttcgac
ctgccgctgaccctcgaggacgcggccgaggactactgccgcctggacgtgccgggcggc
agtgcgggcagcacctcgtcgtctcagagctcgccggagcagacccacttggactttgtg
gacggcaacatcggcatcaagcacgagtaccagctgctgcacgactccgggctcttctcg
cacgccatcctcaacccgctgcccgagggctgcaccctgctggagatagagcacataact
cagagtgtgctgaagtcccactttgagacgagccggtacagcacagaggagctgaacaga
atggcgtggacctccgacagcccggaggagacacgcgcataccagaccaagtcagctgag
gcgatgtggcaacaatgcgccattcaaatcaccaacgccatccagtacgtggtggagttt
gccaagcgcatctacggcttcatggacctctgtcagaacgatcagatcatcctcctcaaa
gcaggctgcttggatgttcttctgatccggatgtgtcgggcctataaccccatcaacaac
acgatgctctttgacggaaagtttacagccgctcatcttttcagagcacttggctgtgac
gacctggtgagcgcggtctttgacctgggtaaaagcctgagctgtgtacaaatgtccgag
gaagagatggccctcttcagcgctgcagttctgctctcgccagaccgagcctggctgacg
gatgttgagaagatacagaagttgcaggagaaagtgtacgtggcgttgcagttctgccta
caaaaggagggaggagccgaggagaaactggccaagatggtgtctaagcttcccatcatg
aagtccatttgcgaccttcactttgagaaactggagtttttccgcatgctgcaccctgaa
accgcctacaccttccctcctctttacagggaagtgttcagcagtgaaatcaccttcccc
gactccacccagggctag
DBGET
integrated database retrieval system
