Gasterosteus aculeatus (three-spined stickleback): 120824322
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Entry
120824322 CDS
T07457
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03460
Fanconi anemia pathway
gat04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120824322 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120824322 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120824322 (her6)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120824322 (her6)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
120824322 (her6)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
120824322 (her6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
120824322
NCBI-ProteinID:
XP_040040991
UniProt:
A0AAQ4Q737
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Position
VIII:complement(12726376..12728139)
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AA seq
276 aa
AA seq
DB search
MPSDMMEKTSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPSQHQHPHQLPSAAGPTHPSFGQSM
QIPGSSPQVLPMNPVTCKGGSSPASLPSDATKVYGGFQIVPATDGQFAFLIPNAAFAPNG
PVIPVYANNAGTPVPLPAAVSPGAPSGNADSVWRPW
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgatatgatggaaaaaacgtcctcttctccggtcgctgcaactccggcaagc
atgaacactactccggataaacccaagacagcatctgagcacagaaagtcatccaagcca
ataatggaaaagaggagaagagccagaatcaacgagagcttggggcagctgaaaactctc
atcctggatgcgctcaaaaaagatagctcaagacactccaaactggagaaggcggacatc
ctggagatgacggtgaagcatctccggaacctccagagggctcagatgaccgctgcactg
aacaccgaccccactgtcttgggaaagtatcgtgccggtttcagcgagtgcatgaatgaa
gtcacccggttcctgtccacctgcgaaggcgtcaacaccgaggtcagaacgcggctcctc
ggccacctggccagctgcatgacccagatcaacgccatgaactaccccagccagcatcaa
cacccgcaccagctgccctccgccgccggaccgacccacccgtccttcggccagtccatg
cagatccccggctcgtccccgcaggtcctgcccatgaacccggtgacctgcaaaggaggc
tcgtcgccggctagtttgccgtcggacgccaccaaagtgtacggcggtttccagatcgtg
cccgccacagacggacagtttgcgttcctcatacccaacgcggcttttgcgccgaacggc
cccgtcatccccgtttacgccaacaacgcgggcacgccggtgcccctaccggccgcggtg
tcccccggagccccgtcgggcaacgcggactcggtgtggcgaccgtggtga
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