Gasterosteus aculeatus (three-spined stickleback): 120824369
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Entry
120824369 CDS
T07457
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120824369 (sned1)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
120824369 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
MAGP
EGF_3
SdrD_B
cEGF
EGF_MSP1_1
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
120824369
NCBI-ProteinID:
XP_040041109
UniProt:
G3NHQ1
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All DBs
Position
VIII:2918480..2938875
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AA seq
1396 aa
AA seq
DB search
MVLVLLSLLPRFCALLSLNLLPGGESAVPLEDFYPFGRDMGDAETIAQDDGGSRLVEISV
AFPFFGDKHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGRVFY
RESREPSILSRASGDVNAYFSEFPRFNATWVLISTWHQVTFFGGNSLTPVNTFQAVLITD
GDLSFTIFQYNNITWTTGMHVSSGGNPAGLGGIAAQAGFNAGDGKRYFNIPGSRTADVVN
VEGTTNVGYPGKWVFRIDDANVEVGSCNDSASVCPHLRPCLNGGQCIDDCVTGNPSFSCS
CLAGFTGRRCQIDVNECASRPCQNGGTCGDQINGFLCHCPPGYTGSQCETDVDECKDKPC
LNNALCVQGTGGFTCVCEPGYTGVLCETDINECEPQPCLGGGECVDQVANFTCVCPAAFT
GELCQTELVVLQVNATENQTAACEEDGDCREHRVCGDAGSGASNCTCAPGFYGDQCEKEC
LCQNGGVCVDINGTCECPSGYTGLYCQFEVTQTPCSNSRTCPDGGPCLEYGGTYLCTCQT
SAAELDHKDFYPYVQPRSACDSSPCLNGGYCYERDGGYTCECKYGYRGKHCEKVRLNTCA
SGPCRNGGSCKEEAGSYRCVCPYRFTGKHCEVGKPDPCASSPCRNGGTCFHYIGKYKCEC
TEAFSGRHCEISRTSLQAVAELGCGPPPQVKNAEVQFSSTTTGSMAVYICHSGFRSVPRA
TQSICGIQGDWSQPPVCEEVNECLSQPCLNGGTCRNQVGSHQCECADGFSGSRCQTADIK
TCLSEPCEHGGTCEDRPGSYLCHCSQGFKGQNCEMEQDGCESGPCLNGGVCRGYRRNYLC
SCKGGFFGDQCQMLENPCVLQPCGNRGLCRSDKRGNYNCFCRVGHTGKDCEKDLLPPSGL
HVLRVEENEVELRWDEPEASHSPVSGFLVTYAPLGRSDPKSDLLERRQSSHVMRGLVPGM
LYNISTFSIKRNTDSNDNSQPATALIRTRPPPAEQLQAVNVSSSQVWLSWLVQAAHHAAV
SRVHVSLTPADGGEARTAVLNASATEHTFSSLVPGQMYTVDVMTQSGIRPDEFPSTSHSA
GPLQFWTRPLPPQNLSLSHVTTNSALISWSRHPRNVPDGFVVNVTRGLNTRSRFLPNGRL
GSYTLRELTPGQNYYVALTAVRSTGQEQIHSFPQHLAFATLPMGARSGRRERPSGTGPGP
QVVRTLPPSQPQHRGGTTETENSDELPRYTELIDRRGKITAKFTHTPRKAVRHRTRPEPA
TRLEKIEETTNKISLALEIQEGLRTKPALPQDCRGLPCHNGGTCVSQGDSFVCDCAAEFK
GRQCELLCQRVPHPCTRLYSETKSVPVWEDGVCHYLYKRTYKVQQDVCYREICEATPPKK
SQEHLGTDEWTVIAGM
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggtgctgctctccctgctgccccgcttctgcgccctgctctccctgaacctg
ctgcctgggggggaatcggccgtgcctctggaggacttctaccccttcggccgggacatg
ggggacgccgagaccatcgctcaggacgacgggggctccaggctcgtggagatctccgtt
gctttccccttctttggagacaagcacacgggactttatgtcaacaacaacggcctcgtg
tctttcctgagggaggtgtctcagttcacgcctgtggcttttcccatcgccggggacagg
cgggtcgtggctccgttctgggcggatgtggacaaccggcgagcagggagggtcttctac
agggagagccgggagccctccatcctgagcagggcctcgggcgatgtcaacgcgtacttc
tcagagttccccaggttcaacgcgacgtgggtcctcatctccacgtggcatcaagtcact
ttcttcggaggcaactccctgacaccggtaaacactttccaagcagtgctcattacagat
ggagatctctccttcacaattttccagtacaataacatcacttggaccacaggcatgcat
gtcagcagcggaggaaacccggctggtctgggtggcatcgcggcgcaggcaggcttcaac
gccggggatgggaagcgctacttcaacatccccggctcgcgcacggctgacgtggtgaac
gttgagggtaccaccaacgtgggctacccgggaaaatgggtcttccgtatagacgatgcg
aatgtggaagtgggcagctgcaacgattccgcgtccgtgtgcccgcacctccggccgtgt
ctgaacggcggccagtgcatcgacgactgcgtcaccgggaacccctccttctcctgctcc
tgcctggccggcttcaccggccggcggtgccagatcgacgtcaatgagtgtgcctcgcga
ccgtgccagaacggagggacttgtggagaccagattaacggtttcctatgtcactgtcca
cctggatacacagggagtcagtgtgaaacagacgttgacgagtgcaaagacaaaccgtgc
ctcaacaacgcgctgtgtgttcaaggcaccggcggtttcacctgtgtgtgtgaaccgggc
tacactggtgtcctgtgtgagacagacataaacgaatgcgagccgcagccctgcctgggt
ggaggagagtgcgtcgatcaggtggccaacttcacctgcgtttgtcccgccgccttcact
ggagaactctgccagacagagttggtggtgctgcaggtcaatgcaacggaaaaccaaacg
gccgcgtgcgaagaggacggcgactgccgcgagcaccgggtttgtggagacgccggctcc
ggagcctctaactgcacgtgtgctccaggcttctacggggaccagtgtgaaaaggaatgt
ctttgccagaacgggggtgtctgtgtggacatcaatgggacttgtgaatgcccttccggc
tacacaggactctactgtcagtttgaagtaacgcagacgccatgcagtaacagcaggacg
tgtcccgacggcggcccctgtttggagtacggagggacctacctgtgcacgtgtcagacc
agtgcagcagagctggaccacaaggacttctacccctatgtacagccccgatcggcctgc
gactcctctccgtgtctgaatggaggctactgctacgagcgggatgggggctacacctgc
gaatgcaaatacggataccgggggaagcactgtgaaaaagtcagactcaatacctgtgct
tctggcccctgccgcaacggaggctcctgcaaggaagaggcaggcagctacagatgtgtg
tgtccttacagattcactggaaagcactgcgaagtggggaagccagacccctgtgcctcc
agcccgtgtcggaatgggggaacatgtttccactacatagggaagtacaagtgtgaatgc
acagaggccttcagcggcaggcactgtgaaataagcaggacgtccctacaggccgttgca
gagcttggctgcggcccgccgccacaagtgaagaacgcagaggtgcagttctcctcaaca
acaaccggctccatggctgtctacatatgccactcaggcttcagatccgtgcccagagcc
acccagagcatctgtggcattcagggggactggagccagccccccgtctgtgaggaggtc
aatgaatgcctatcacagccttgtcttaatggcggtacgtgtcggaaccaggtgggatcc
caccagtgtgagtgtgcagatggcttcagtggaagccgctgtcagacagcggacataaag
acatgcctgtcggaaccctgcgagcacggggggacatgtgaggaccggcctggctcctac
ctgtgtcattgttctcaaggcttcaaaggccagaactgtgaaatggagcaggatggctgt
gagtccggcccttgtctaaacggaggcgtgtgtcggggttacagacggaattatttgtgc
tcatgcaaaggcggcttctttggggaccagtgccagatgttggagaacccgtgcgttctg
caaccttgtggcaaccgcggcctctgccggagcgacaagagagggaactacaactgcttc
tgccgggtcggacacacgggcaaagactgcgagaaagacctgttgcctccctccggcctc
cacgtgctgcgcgtggaggagaacgaggtggagctgcgctgggacgagccggaggcctcg
cacagcccggtcagcggcttcctcgtcacgtacgcccccctcggccggagcgaccccaaa
agtgacctgctggagaggcggcagtcttcccacgtcatgcgcggcctggtgcccggcatg
ctgtacaacatctccaccttctccatcaaacgcaacaccgacagcaacgacaacagtcag
cccgccaccgcgcttatacgcaccagacctccgccggcggagcagctgcaggccgtcaat
gtgtcctcctcccaggtgtggctgagctggctggtgcaggcggcgcaccacgcagccgtc
agcagggtgcacgtgtcactgacgcccgcggacggcggcgaggctcgcaccgccgtgctc
aacgcgagcgccacggagcacaccttcagttcattagtgcctggtcagatgtacacagtg
gatgtgatgacccaaagtggaatcagaccagacgagtttccttccaccagccactccgcc
ggaccgctgcaattctggacaagacctctccccccacagaacctctccctgtcccacgtg
accactaactcggcactcatcagctggagccgccacccgagaaacgtccccgacggcttc
gtggtcaacgtgacccgagggttgaacaccaggagccgcttccttcccaacgggagatta
ggatcgtataccctgcgcgagctgacgccggggcagaactactacgtggccctgacggcg
gtgaggagcaccgggcaggaacagatccacagcttcccgcaacacttagccttcgccacc
ttgccaatgggggccagatccgggagaagagagaggccaagcgggacgggaccaggacct
caggtggtccgcacacttcccccgtctcagcctcagcaccgcggaggcacgaccgaaacg
gagaactcggatgagttacccaggtacacagaactcatcgacagacggggaaagataacg
gccaagttcactcacacgcctcgaaaagccgttcgacatcgcactagacccgaaccagcg
acgagattagagaaaatcgaggaaacaacaaacaaaatcagcctcgcacttgagattcaa
gagggattaagaacgaagcctgcgctgccgcaggactgccgcggtctgccctgccacaac
gggggcacatgtgtgagccaaggcgactccttcgtctgcgactgcgcagccgagttcaag
ggcagacagtgtgaactgctgtgccagagagtgcctcacccctgcacccgactctactcg
gagaccaagagcgtgcccgtgtgggaggatggcgtctgccactacctgtacaaaaggacg
tacaaagtgcagcaggatgtttgttatcgggagatttgtgaagcgacgcctccaaagaaa
agccaggagcacttgggtaccgatgaatggaccgtcatcgctggcatgtga
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