Gasterosteus aculeatus (three-spined stickleback): 120824561
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Entry
120824561 CDS
T07457
Name
(RefSeq) PDZ and LIM domain protein 3-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120824561
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120824561
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120824561
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120824561
NCBI-ProteinID:
XP_040041368
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All DBs
Position
IX:16711371..16717497
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AA seq
315 aa
AA seq
DB search
MPLSVVLDGPAPWGFRLTGGKDFNQPLTISRITPGSKAAVANLCAGDIIVAIEGVPTTNM
LHCEAQNRIKESARRLSLTVERNESSLWSPRVVEDGKNHPYKVNLEAEKQEYKPIGAAHN
RKAQPFVAAANIDDSHQVVSSAYNTPIGLYSSGNIQDAMEGQIRGLALPKPDSPRTLASI
EDSDVYQMLQRDQEEPQEPRQSGSFRALQDFIDSDGTRPIVTRAVKAPATRATPPTGNLQ
KLPVCDKCGNGIVGTVVKARDKYRHPGCFVCSDCDVNLKQKGYFFVGGQLYCEAHARVRM
RPPEGHDLVSTFPSA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgccactcagcgtggtgctggacggtccggccccctgggggttccgcctgacgggggga
aaggacttcaaccagccgctgaccatctccaggatcacccccggcagcaaggccgcggtg
gccaacctgtgtgccggtgacatcatcgtggccatcgagggcgtcccaaccacaaacatg
ctgcactgcgaagcccagaaccggatcaaagagtccgcccgccgcctcagcctgaccgtt
gaaaggaatgaatcgagtctgtggtccccccgcgttgtggaggacggtaaaaatcacccg
tataaagtgaacctagaagcagaaaagcaggagtataaaccaatcggcgccgcgcacaac
cggaaagctcagccgtttgttgccgcggcgaacatcgacgactcgcatcaggtggtcagc
tccgcctacaacaccccgataggcctttactcctcgggcaacatacaggacgccatggag
ggccagatccggggcctggctctacccaagcccgacagccccaggactctggccagcatc
gaggattccgacgtgtaccagatgttgcagagggaccaggaggagccgcaggagccccgg
cagtcgggctccttccgggccctgcaggacttcatcgacagcgacggcactcgtcccatt
gtgaccagggccgtcaaagcaccggcgaccagagcgactccgcccacaggaaacctgcag
aaactgcccgtctgcgacaagtgtgggaatgggattgtcgggacagtggtcaaagcacga
gacaaataccgtcaccccggctgctttgtgtgctccgactgtgacgtcaacctcaaacag
aagggctacttcttcgtgggggggcagctgtactgcgaggctcacgctcgggtcagaatg
agaccaccggagggacacgacctcgtgtccacgttcccctctgcgtag
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