Gasterosteus aculeatus (three-spined stickleback): 120824563
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Entry
120824563 CDS
T07457
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120824563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120824563
Membrane trafficking [BR:
gat04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120824563
Protein recycling
Other Rab GTPase associated proteins
120824563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
Usp38-like_N
Motif
Other DBs
NCBI-GeneID:
120824563
NCBI-ProteinID:
XP_040041374
LinkDB
All DBs
Position
I:10425375..10431092
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AA seq
496 aa
AA seq
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MMTSQRRGIHLDQSELLCTKGCGFYGNTGWQGLCSKCWREENQKEKQKQIQEDWALAERL
QKEEEEAYASRHQQAQLQPTITPFSKFEERKTKEKSSKVNTVTKFFIPSSKTASKKDAPL
EAQSRPSPSSSANRHSSVDNDHATREFIDFLKPLKSGREIFKQCRAFTESMAYKRDMAAD
ELSECVQDFYQNLSDRLHTQFKGSSEHVESVMDQVEKYMMTRLYKEVFCPETTDDEKKDL
AIQKRIRALHWVTIEMLCVPVDEEIAEVSDSVVKAITDVIEMDSKCVPKEKLACITRCSK
HIFNAIKITKKEAASADDFLPTLIYIVLKANPPRLQSNIQYITRFSNPSRLMTGEDGYYF
TNLCCAVAFIEKLDGQSLNLSSEEFELHMTGQASPQRPQATGASSGSSALSQGHQRVDPL
AGLGERQEQVMEKARQLESDLIDWTDEVEQKVQSVLESFPPEAQNPAATAAASAIDSDNV
ENEQLPPPLQPQVFAG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgagccagcggcgtgggatccatctggaccaatcagagctgctctgcacgaaa
ggatgcggtttttatggcaacaccggttggcagggcctgtgctccaagtgctggcgagag
gaaaaccagaaagaaaagcaaaaacagattcaagaggattgggcgcttgctgagaggctg
cagaaagaggaagaggaggcctatgcaagcagacatcagcaggcccaattgcagcccacc
atcacacccttcagcaagtttgaggaaagaaaaacaaaggaaaagtccagcaaagtcaac
acggtcacaaagttttttattccttccagcaaaacagcatcaaaaaaagatgctcctttg
gaggctcagtccagaccgagccccagctcctccgcaaaccgacattcctctgtggacaat
gaccatgcaacgcgggagttcattgattttctcaagcctctgaagtccgggagggagatc
ttcaaacagtgccgggccttcactgagagcatggcgtataagcgggacatggctgctgat
gagctgtcagagtgtgtgcaggacttctaccagaacctctccgatcgcctccacacccag
ttcaaaggttcgtcagaacatgtcgagagcgttatggatcaagtagaaaagtacatgatg
actcgtctctacaaggaggttttctgccctgagaccacagatgatgagaagaaagacctg
gccattcagaagagaatcagagccttgcattgggtcaccatcgagatgttgtgtgttcct
gtagatgaggagatcgctgaggtgtcagacagtgtagtcaaagccatcacagatgtgatt
gaaatggattcaaagtgcgtgcccaaggagaagctggcgtgcatcactcgttgcagcaag
cacatcttcaacgccatcaaaatcaccaaaaaggaggcggcgtccgcggacgacttcctg
ccaacgctcatctacattgtactaaaagcgaaccccccgcgacttcagtccaacatccag
tacatcacccgcttcagcaaccccagcagactcatgactggagaggacggctactacttc
actaatctgtgctgtgccgtggccttcatcgagaagctggacggccagtctctgaacctg
agctctgaggagtttgagctccatatgacgggccaggcgtccccccaacggccacaggcc
accggagcatcctccggcagcagcgctctcagccagggccaccaacgcgtggacccgctg
gcggggctcggggaaaggcaggagcaggtcatggagaaggcccgccagctggagagcgac
ctcatagactggacggacgaggtggagcagaaggtgcagagcgttctggaaagctttccg
ccagaggcgcaaaaccccgccgcgaccgcagcggcgtctgccatcgactctgataacgtt
gagaatgagcagctcccacctcctctgcaaccgcaagtgttcgctggctga
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