Gasterosteus aculeatus (three-spined stickleback): 120824573
Help
Entry
120824573 CDS
T07457
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04517
IgSF CAM signaling
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120824573
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120824573
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gat04812
]
120824573
Cytoskeleton proteins [BR:
gat04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120824573
Intermediate filaments
Intermediate filament-binding proteins
120824573
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
NPV_P10
Motif
Other DBs
NCBI-GeneID:
120824573
NCBI-ProteinID:
XP_040041382
LinkDB
All DBs
Position
9:complement(20542308..20566320)
Genome browser
AA seq
2337 aa
AA seq
DB search
MTTVAADLDHLELQQQYSSNDTVNNRWDEEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKA
LQFLKEQRVHLENMGCHDIVDGSHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDAL
LLWCQMKTAGYSNVNIRNFSTSWRDGMAFNALIHKHRPDLVDFDKLKKSNAHYNLQNAFN
LAEQHLGVTQLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIE
TEKMVEKYESLASDLLEWIEQTIIILNNRKFANSLGGVQQQLQAFNTYRTVEKPPKFTEK
GNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRMELIRQEK
LEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVDAATKKHEAIETDIAAYEERVQ
AVVSVAKELEAEHYHDIKRITARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEMLY
IMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVGTNATKFSVNND
GYKPCNPQVIQDRVSHLEFCYQELTQLAAERRVHLEESRRLWKFFWEMAEEEGWIREKEQ
ILSSVEHSKDLTGALRLLSQQRALEDEMSGRAGHLKHTIVEGRAMVQTDHFAATKIQERI
DDLQAQWAALEQLAAVRRKRLEEALALHQFQVDADDVDAWTLDALRIVSSGETGHDEFST
QALFRKHKDASAEVASYRPVIDSLHEQAASLPEEEAESEEVRGRLAGIEERHKEVTELTK
LRKQALHDALARYKMFSEANACEVWIDEKEQWLNSLEIPEKLEDLEVIQHRFESLEPEMN
NQASRVAVVNQIARQLVHNGHPSEKDIRTQQDKLNNRWSQFRNLVDQKKESLNSALGVQN
YHLDCNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLQGEA
KRLAEEHPDQAKAITGRLAEITAVWEEMKNTLKNREESLGEARKLQQFLRELDDFQSWLS
RAQTAIASEDMPNTLTEAEKLMAQHEGIKNEIRNYEEDYQKMRDMGDMVTQGQTDAQYMF
LRQRLQALNTGWNELHKMWENRQNLLAQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPT
TLEGAEAAIKKQEDFMTTMDANEDKINGVVEAGRRLASDGNINSERIQERVASIDDRHKK
NREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMTYDEARNLHSKWLKHQAF
MAELQANKEWLDKIQKDGTLLVSEKPETEAVVKEKMAGLHAMWEELESTTQTKAQCLFDA
NKAELFTQSCADLDKWMGGLEGQFQSDDYGKDLTSVNILLKKQQMLEKQVEVRQKEVVEL
QTQVKALGQEVKDTDEVDSRRQLVEMKFQELLEPLRCRKNFLVESREIHQFNRDVEDEIL
WVQERMAVVTSSDHGHNLQTVQLLIKKNQTLQKEIQGHQPRISDILERSRGLLKDVIRQR
LEDLQDLWRRLMEEAELRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEMS
AITMQKKHQIVEQAAEDYAETVHHLSKTSRGLVTDGHPESERISMRQSQVDKLYAGLKDL
SEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARD
TGNIGQERVDAVNRLADELINAGHGDAATVAEWKDGLNEAWADLLELIDTRTQILAASFE
LHKFYHDAKEILGRILDKQKKLPEEVGRDQNTVETLQRMHTTFERDIQALGTQVRQLQDD
AVRLQSAYAGDKADDIQRRESEVLESWRSLLEACDGRRLRLLDTGDKFRFFSMVRDLMLW
MEDVIRGIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTSCIELGKSLLARKHYASE
EIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSGREMG
QSVDDVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRLQEEEERMRRPPSPEPV
VVLEEEPQQHSGLITQNGLPSDQDSPRDGGEKGDLLNGVCERSSKEPSPGTSPTSGRKSK
TSQSSTLPPKDQDPRPQLEGLLHRKHEWEAPNKKASNRSWHHVFCVITNHELGFYKDSKA
ATQGAHYHSQAPVSLREASCDVASEYKKKKHVFKLRATDGNEFLFQAKDEEEMSTWIQAI
LNAGGDRPDPAGSGPGTPASGRAQTLPAGGDSSPGKREKDKDKDKEKRFSLFSKKKA
NT seq
7014 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtcgccgccgacttggatcacctggagctgcagcagcagtacagcagcaac
gacacggtcaacaaccgctgggacgaggagtgggacaacgagaacagctcggcccgcctc
ttcgaacgctcccgcatcaaagcgctggcagatgagcgggaggcggtgcagaagaagacc
ttcactaagtgggtaaactctcacttgtccagagtctcctgcaggatcacagacctctac
atggacctgagagacggacggatgctgatcaaactgctggaggttctgtcaggagagagg
ctgccaaagcccaccaagggccggatgcgtattcactgtctggagaacgtggacaaagct
cttcagttcctgaaggagcagcgggttcacctggagaacatgggttgtcacgacattgtg
gacgggagccatcgcctgactctgggcctcatctggaccatcatcctccgcttccagatt
caggacatcagtgtggagaccgaagacaacaaagaaaagagatctgctaaagacgctctg
ctgctctggtgtcagatgaagacggcaggatattccaacgtgaacatccgcaacttcagc
accagctggagggacggcatggccttcaatgctctcatccacaaacacagaccagatctg
gttgattttgacaaactgaagaaatccaacgctcattacaacctgcagaacgctttcaac
ctggcagagcaacacctgggcgtcacgcagctgctggacccagaggatatcagcgtggac
catcctgatgagaagtccgtcatcacctatgtggtgacgtattaccactacttctccaag
atgaaagctctaaaggtggaaggcaaacgcatcggaaaggtgttggataacgccatcgag
acggagaagatggtcgagaagtacgagtctctggcctcagacctgctggagtggatcgag
cagaccatcatcatcctcaacaacaggaagttcgccaactccctcggcggtgtccagcag
cagctgcaagccttcaacacctaccgaaccgtggagaaacccccaaagttcacagagaag
gggaacctggaggttcttctgttcaccatccagagtaagatgagagccaacaaccagaag
gtctacatgcccagagagggaaaactcatctcggacatcaacaaggcctgggagcggctg
gagaaggcggagcacgagagggagctggctctgaggatggagctgattcgtcaggagaaa
ctggagcaactcgccaggcgcttcgaccgcaaggcggccatgagggagacctggctgagt
gagaaccagagactggtgtcgcaggacaactttggttttgacctccaagccgtggatgcg
gccaccaagaagcacgaggccattgagacggacattgcggcgtacgaggagcgcgtccag
gccgtggtctctgtggcgaaggagctggaggcggagcactaccacgacatcaaacgcatc
acagccaggaaagacaacgtgatccggctgtgggagtatctgctggagctgctgaaggcc
cgcagacagagactggagatgaacctgggcctgcagagggtcttccaggagatgctctac
atcatggactggatggacgagatgaagatgttgctgctgtctcaggactatggcaagcat
ctgttaggcgttgaggacttgctgcagaaacacgccctggtggaggctgacatcgccatc
caggctgaccgggtgaaggcagttggcaccaatgccaccaagttctctgtcaacaacgac
ggctacaagccctgcaaccctcaggtcatccaagatcgggtctcccacctggagttctgc
taccaggaactgacccagctggccgctgagcgccgtgtccacctggaggagtcccgccgc
ctgtggaagttcttctgggagatggcggaagaggaagggtggattcgtgagaaggagcag
atcctgtcctctgtggagcacagcaaggacctgacgggggcgctacgcctcctcagccag
cagcgcgccctagaggacgagatgagcggtcgcgccggccacctcaagcacaccattgtg
gagggccgggctatggtgcagaccgaccacttcgccgccaccaagatccaggaacgtatc
gatgacctgcaggcccagtgggcggcgctggagcagctggcggcggtgaggaggaaaagg
ctggaggaggcgctggcgctgcaccagttccaggtcgatgcggacgatgtcgacgcctgg
acgctggacgccctgcgaattgtctccagcggagagacgggccacgatgaattctccacc
caggccctcttcaggaagcacaaggacgcatcagcggaggtagccagctaccggccggtc
atcgactcactccacgagcaggctgcctcgctgcctgaagaggaggctgagtcggaggag
gtgcgcggacgtctggccggcattgaggagcgccacaaggaggtgaccgaactgacaaag
ctgaggaagcaggcactgcacgacgctctggcacgctacaagatgttcagcgaggccaac
gcctgtgaggtttggatcgacgagaaggagcagtggctgaacagcctggagatccccgag
aaactggaggacctggaggtcatacagcacaggttcgagagtctggagccggagatgaac
aaccaggcgtcccgtgtggccgtggtaaaccagatcgcccggcagctggtgcacaatggt
cacccgagtgaaaaggacatccggactcagcaggataaactcaacaaccggtggagccag
ttccgaaatctggtcgaccagaagaaagagtccctgaactcggctctgggggtgcagaac
taccaccttgactgcaacgagacaaaatcctggatcaaagagaagaccaaagtcatcgag
tccacccaggagctgggcaacgacctcaccggggtcatggccctgcagcgcaaacttacc
ggcatggagcgcgacctggctgccatcgaggacaaacttggcgacctgcaaggcgaggcc
aagcggctggcggaggagcaccccgaccaggcgaaggccatcacgggtcgcctggccgag
atcaccgccgtctgggaggagatgaagaacactctgaagaaccgcgaggagtcgctgggc
gaggcccggaagctgcagcagttcttgcgcgagctggacgacttccaatcctggctgtcc
cgcgctcagacggccatcgcctccgaggacatgcccaacactctgacggaggccgagaag
ctaatggctcagcacgagggcatcaagaacgagatccggaactacgaagaggactaccag
aagatgcgggacatgggggacatggtgacacagggccagacggacgcccagtacatgttc
cttcgacagaggctgcaggcactcaacaccggctggaacgaactgcacaagatgtgggag
aaccgacagaacctgctggcccagtctcacgcctatcagctgttcctcagggacaccaag
caggccgaggccttcctcaacaatcaggagtacgtcctggctcacaccgagatgcccacc
accctggaaggtgcagaggctgccatcaagaagcaggaggacttcatgaccaccatggac
gccaacgaggacaagatcaacggcgtggtggaggccggcaggcggctggccagcgacggg
aacatcaacagcgagcgcatccaggagagagtcgcctccatcgacgacagacacaagaag
aaccgggaggcggccgtggagcttctgatgaggctgaaggacaacagagatctgcagaag
ttcctgcaggactgccaggagctgtctctgtggatcaacgagaagatgctcacagctcag
gacatgacctacgacgaggccaggaacctgcacagcaagtggctgaaacaccaggccttc
atggccgaacttcaggccaacaaagagtggctggacaagatccagaaggacgggacgctg
ctggtgtcagagaagccggagacggaggcggtggtaaaggagaagatggcggggctccac
gccatgtgggaggagctagagtccaccacgcagaccaaagctcagtgtctgttcgacgcc
aacaaggccgagctgttcactcagagctgcgccgacctcgacaagtggatgggaggcctg
gagggtcagttccagtccgacgactacggcaaagacctgacctccgtcaacatcctgctg
aagaaacaacagatgctggagaagcaggtggaggttcggcagaaggaggtggtggagctg
cagacccaggtcaaggctctgggtcaggaggtgaaggacactgacgaggtggacagtcgg
aggcagctggtggagatgaagttccaggagctgctggagccgcttcgctgcagaaagaac
ttccttgtggagtccagagaaattcaccagttcaaccgagacgtggaggacgagatcctg
tgggttcaggagaggatggctgtggtcacgtcctcggaccatggacacaacctgcagacg
gtccagctgctcatcaagaagaaccagactctgcagaaggagatccagggccatcagcct
cgtatcagcgacatcctggagcgcagccggggcctcctgaaggacgtcatccgccagcgc
ctggaagacctgcaggacctgtggaggcggctgatggaggaggcggagcttcgccatggc
cggctggaggaggcgcacaaagcccagcagtactacttcgacgccgccgaggccgaggcc
tggatgagcgagcaggagctgtacatgatgtccgaggagaaggccaaggacgagatgagc
gccatcaccatgcagaagaagcatcagattgtggagcaggcggcggaggactacgccgag
actgtccaccacctgtccaagaccagcagaggactggtgacggacggacaccctgagagt
gagcggatcagcatgcgtcagtctcaggtggataaactgtatgcaggcctgaaggaccta
tcggaggagaggcggggcaaactggacgagaggctccgcctcttccagctgaaccgggag
gtggacgacctggagcagtggatcgctgaacgcgaggtggtggccgggtcgcacgagctg
ggacaggactacgagcacgtcaccatgctgcaggagcgtttccgtgagttcgcccgggac
accgggaacattgggcaggagcgcgtggatgccgtcaaccgcctggcggacgagctgatc
aacgccgggcacggcgacgcggccacggtagcggagtggaaggacgggctgaatgaggcc
tgggccgacctgctggagctcatcgacaccaggacgcagatcctcgccgcctccttcgag
ctccacaagttctaccacgacgccaaggagatcctgggacgcatcctggacaaacagaag
aagctgccagaggaggtgggccgagaccagaacacagtggagacgcttcagagaatgcac
accaccttcgagcgcgacatccaggccctggggacacaggtgaggcagctgcaggatgac
gcggtgcgtctccagtcggcgtacgccggagacaaagcagacgacattcagcggcgggag
agcgaggtgctggagtcctggaggagtctgctggaggcctgcgacggacggaggctccga
ctcctcgacaccggagacaagttcaggttcttcagcatggttcgggacctcatgctgtgg
atggaggatgtgatccggggcatcgaggcccaggagaaccccagagacgtgtcctcagtg
gagcttctcatgaacaaccaccagggcatcaaggccgagattgatgcccgaaacgacagc
ttcacctcctgcattgagctggggaagagcctgctggctaggaagcactacgcctcagag
gagatcaaagagaagctgctgcagctgaccgacaagaggaaagagatgattgacaagtgg
gaggaccgatgggagtggcttcggctcatcctggaggtgcaccagttctcccgtgacgct
ggtgttgccgaggcctggctgctgggtcaggagccctacctgtccggtagagagatgggt
cagagcgtggacgatgtggagaagctcatcaaacgccacgaggccttcgagaagtcggct
gccacctgggaggagcggttctctgctctggagaggctgaccacgctggagctgctggag
gtgaggaggctgcaggaggaggaggagagaatgaggaggccaccatctccagaacctgtt
gtggtgctggaggaggagcctcagcagcacagcggccttatcactcagaacggcctccca
tcagaccaggactctccccgggacgggggggaaaaaggagatctgctgaacggtgtctgc
gagcggagctccaaggagccgagtcctggaacctcaccgacctctggcaggaagagtaag
accagccagtcctccacgctaccccccaaagaccaggacccccgccctcagctggagggt
ctcctgcaccgcaagcacgagtgggaggcccccaacaaaaaggcctccaacaggtcgtgg
caccacgtgttctgcgtcatcaccaaccacgagctgggcttctacaaagacagcaaggcc
gccacccagggagcccactaccacagccaggcccccgtcagcctgagggaggcctcgtgc
gacgtagcctccgagtacaagaagaagaaacacgtcttcaaactccgggcgacggatgga
aacgagtttctgtttcaagccaaagatgaagaggaaatgagcacctggatccaggccatc
ctgaacgccggcggcgaccggcctgacccggcgggcagcggtcccggcaccccggcgtcg
ggccgcgctcagacactgccggccggcggcgactcgagtcccggcaagagagagaaggac
aaggacaaggacaaggagaagcgcttcagcctgttcagcaagaagaaagcgtag
DBGET
integrated database retrieval system
