Gasterosteus aculeatus (three-spined stickleback): 120824591
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Entry
120824591 CDS
T07457
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04141
Protein processing in endoplasmic reticulum
gat04210
Apoptosis
gat04217
Necroptosis
gat04218
Cellular senescence
gat04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120824591
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120824591
04217 Necroptosis
120824591
04218 Cellular senescence
120824591
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120824591
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gat01002
]
120824591
Enzymes [BR:
gat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
120824591
Peptidases and inhibitors [BR:
gat01002
]
Cysteine peptidases
Family C2: calpain family
120824591
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
PRT_C
Motif
Other DBs
NCBI-GeneID:
120824591
NCBI-ProteinID:
XP_040041422
LinkDB
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Position
IX:20492574..20504412
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AA seq
798 aa
AA seq
DB search
MMMVTMMMVMMMMVMMMVMMRYLRPSHRAGLVLQQSNHQHSVSTSTAQLLQLLLLLVLVL
LVLLVLHPATADSLPTILLDEISMFGGISGRIQKDRQRAGGLGTVQQAVPYLNQNFQDLK
EDCQQNGFLFQDPVFPAEPASLGFKELGPFTAKTRGVEWKRPTELTENPQFIVGGATRTD
ICQGALGDCWLLAAIGSLTLNERLLHRVVPHGQNFSQEYAGIFHFQVRSHLSRCCSHSPF
WQFGEWVDVVIDDRLPVKDGELMFVHSAEGSEYWSALLEKAYAKLNGSYEALSGGSTTEG
FEDFTGGVSEMYELRKAPRDLHRIISKALERGSLLGCSIDITSSLDMEAVTFKKLVKGHA
YSVTALRQVEYHGNMEKLIRIRNPWGQVEWTGAWSDSSSEWTSVDPAEKDELLCQMEDGE
FWMSFQDFLRQFSRLEICNMTPDALSQDSSSFWTTTMFEGGWRRGSTAGGCRNHPNTFWI
NPQYKVSLLEEDDDPTDEEPACSLLVALMQKDRRRYRRHGQDVHTIGFAIYEVPEEYRGR
ASVHMKKDFFLRHSSCARSETFINLREVSARLRLPPGEYIVVPSTYEPSKEADFVLRVFT
EKHSETEEMDDNVEATFEQEEEVLVNDVDESFRSMFAQLSGDDMEISVQELRTVLNRVMS
KHGDLQTDGFSMESCRAMVSLMDKDGSARLGLLEFQVLWNKIRKWLGIFREFDLDKSRCM
NAYEMRLALGEGGFKLNNKLYQMLVARYADNEIIDFDNFTCCLVKLEAMFKAFQELDRDG
TGRVELNISEWLYVTMCG
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggtgacgatgatgatggtgatgatgatgatggtgatgatgatggtgatgatg
aggtatctccgtccctcccatcgggcggggcttgttctgcagcagagcaaccaccaacac
agcgtctcaaccagtactgcacaactacttcaactgctgctactacttgtacttgtactg
cttgtactacttgtactgcaccctgctactgccgactcgcttcctacaatccttttggac
gagatcagcatgtttggaggcatatctgggcggatccagaaggaccggcagagggctgga
ggtctgggcacggtccagcaggcggtaccctacttgaaccagaacttccaggacctgaag
gaagactgccagcagaatggattcctgttccaggacccggttttcccagcagaaccggcc
tcactgggcttcaaggaactgggaccgtttaccgccaaaaccagaggggtcgagtggaag
agacctacggagctgacagagaacccgcagttcattgtgggcggagccaccaggacggac
atttgtcaaggcgccctgggagactgttggctgcttgctgctatcggatctctgactctg
aacgaacggctgctgcaccgcgttgttcctcacggtcagaacttcagccaggaatacgcc
ggcatcttccacttccaggtgagaagccacctgtccagatgctgcagccactcacctttc
tggcagttcggggagtgggtggacgttgtcattgacgaccgtctgccagtcaaagacgga
gagctgatgttcgtgcactcagctgaaggcagcgagtattggagcgccctgctggagaag
gcctacgccaagctgaatggctcctatgaggcgctgtccgggggcagcaccactgagggt
tttgaggactttactggcggcgtgtcggagatgtacgaactgaggaaagctcccagagat
cttcatcgtatcatcagtaaagctctggagagagggtctctgctcggctgctctatcgac
atcaccagttctctggacatggaggcggtgaccttcaagaagctggtgaaaggtcatgcc
tactccgtaaccgcgctccgacaggtggagtaccatggaaacatggagaagctgatcagg
atcaggaacccctggggtcaggtggagtggactggagcctggagcgacagctcctcggag
tggacctctgtcgacccggcggagaaggacgagctgctctgccagatggaggacggagag
ttctggatgtctttccaggattttttgcgccagttttcccgactggagatctgtaacatg
accccagacgctctgagccaggactccagctcgttctggaccacaaccatgtttgagggc
ggctggaggagagggagcaccgcggggggctgccggaaccatcccaacaccttctggatc
aacccacagtataaggtgtcccttctggaggaggatgacgatcccacggacgaggagccc
gcatgcagcttgctggtggctcttatgcagaaagaccgccggcgctaccgccgccatggg
caggacgtgcacaccatcggcttcgccatctacgaggttcctgaagagtaccgaggccgt
gccagcgtgcacatgaagaaggacttcttcctgcgccattcctcctgcgcccgctcagag
accttcatcaacctgcgggaggtgagtgccaggctccgcctcccgccaggtgagtacatt
gtggtgccgtcaacctacgaaccttccaaggaggctgactttgtcctgagggtcttcacg
gaaaagcattcagagacggaggagatggacgacaacgtggaggcaacctttgagcaagag
gaggaggtcttggtgaacgacgtggacgagtcctttcggtccatgttcgctcagctgtct
ggagacgacatggagatctcagtccaagagctcaggaccgtcctcaaccgggtcatgtcc
aaacacggagatcttcagacggatggtttcagtatggagtcctgcagagccatggttagc
ctcatggacaaagatggcagcgctcgactcggcctcctggagttccaggttctgtggaac
aagatccggaagtggctgggaatcttccgtgagtttgatctggataaatccagatgcatg
aacgcctacgagatgcgcctggcgctgggagaaggcgggttcaaactgaacaacaagctg
taccagatgctggtcgcccgatacgccgacaacgagatcatcgatttcgacaacttcacc
tgctgcctcgtcaagttggaggccatgttcaaggccttccaggagctggacagagatggg
acaggacgtgtagagcttaacatctccgagtggctctatgtgaccatgtgtggatga
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