Gasterosteus aculeatus (three-spined stickleback): 120824749
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Entry
120824749 CDS
T07457
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04010
MAPK signaling pathway
gat04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120824749
04020 Calcium signaling pathway
120824749
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120824749
Ion channels [BR:
gat04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120824749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
DPM3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
120824749
NCBI-ProteinID:
XP_040041700
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All DBs
Position
IX:6858899..6871500
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AA seq
1373 aa
AA seq
DB search
MPEVALTIQPHGGPNPDPGLEEQEQLPYPDLAPVVLGCFKQTSRPRNWCLKGACGPWLRY
VSILVILLDCVSLGIYVPGQQRSYKLKLLDSIVVTYFVGEMFSKMFAMGLFGYKGSYLSN
YWNRLDLLINLGEFFDFFMDHLGLHLQVSQVLGPLRLISRVASMRDIVSAVLFIFPMLAN
VLCLYMFVVHIFGVIGVQLWAGRLRNRCFLGEDPTAMYNVSLSPYYVNKYGELQTFLCSP
EGTSGRHCGEVPPNRENHQICSLAPPAPSVFGLTGAGTNACVNWNVLYNVCRAGAQNPNS
GATNFDNIGYAWISIFQVVTLEGWSNIMFYVMNVYSFWSFLYFIFVVIMGSYIMMNVCGV
VISTQFSDNLEHLRRRETRRENSDVLGEWLCSKWTGCLAVIRRRASNRVHHHDDDSRADD
LTVKGHIWGQLRTRLEKVVNSKVFDRLIACAVLLSILTLAIQHHNQPNVLTNILQICDLT
FTVIFVVEMLLKWMVLKWAYFEDRNNLLHFVIVIISLSEMRTKEDDWLSVLRAFRLLHYL
PYLRTQLLVLKKAMQEAASLCMLILFVLFVFRHVHAPILSAPPVCLETCGRHPPDSHIPL
TVSHLFFLFLCSLVGMHLFGHGLDTRNTINDRKNFDTLLWSMVTVFQILTEENWNTVLYN
IMAETSPWAFIYFVAVIVMGKHVLLNILVGIVHQGFQDRRTLGESPSSVTSSPTSEDGSA
DTNGDEENRTLGQSPSSVTPTPTVEHGSADVNGDEVNRSQNRNQTALRWCKKREEWSFYV
LSPQNRLRLFCKSVTSHHLFEYTVLLFILLNCITIAMERPGIEPGSKERTFLTISGFVFS
AVFMVEMLFKVLTLGLFIGSESYCRSAWNIVDGLLVVASVVDIVVLLSLASHSKMLDILK
VLRLLRILRALRVVKRSPKLKLAVEALIIAVKPVGNILLLCCALILFYAILGLQLFKGKF
YICRGEFIDDVTNKTDCLSANQRWELKDFNFDSLPQALLSLFVMYSKDGWVTLMYDGLDA
VGVDQQPMINYNVWILPFFISFMIVSYFLLDMFIGVMVHTFHDCQKKQNKLSEEARNSLR
RGAGEDVAEVPKETPYQASYSRMRLSIHTLCTSGPLDLFIAVLIVISVLIMAVEHYQEPL
YIKRLTEYSHYVFTSILLIEVLLKLVAFGGLRFLRNSWNLVDLVIVSVSITSIALNMMSV
SQQVPVNPTILTVLRVLRMGQVLKAKRIRVLLTTIGKTLSQVGNICLLFLFFFTIYATLG
VEFFGHLECAEDELCLGLNEYVNFKHFGMALFTLFLVCTGDNWSMIMMDTLKQCRPGECS
LYLTWVSPIYFITFVVIAQFVLANLVVAVIVQALEDSNKDEGVSGLSTAILAD
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggtggcactcaccatacaacctcacggaggtcccaaccccgacccgggcctc
gaggagcaggagcagctgccgtacccggatctggccccggtggtcttgggctgcttcaaa
cagacatcgagaccccgtaattggtgtctgaaaggggcctgtggcccatggttgcggtat
gtgtccatacttgtgatcctcctcgactgtgtgagtctgggcatttacgtccccggtcag
cagaggagctacaagctcaagcttttggattccattgtagtaacatatttcgtgggtgag
atgttcagcaaaatgttcgccatgggattgtttggctacaaaggaagctacctcagcaac
tactggaacaggttggacctactcatcaacttaggagagttttttgacttctttatggat
cacctcggcctccacctgcaagtctctcaagtgctcgggccgctgcgactgatcagcaga
gtagcgagtatgcgtgacatcgtgtcagcggtcctgttcatcttccccatgctggctaac
gtgctctgcctctacatgtttgtcgtgcacatcttcggcgtgataggggtccagctatgg
gcggggcgtctgcgcaaccgctgcttcctgggagaggaccccactgcgatgtacaacgtg
tccttaagcccgtactacgtcaacaagtacggtgagctccaaacgttcctctgttccccc
gaaggcacgagcggccgtcactgtggcgaggtgccgcccaacagagagaaccaccaaatc
tgctccttggctcctcccgcgccgagtgtgtttggcctcacgggggccggcaccaacgcc
tgcgtcaactggaacgttctctacaacgtctgtcgggccggggcccagaaccccaacagc
ggggccaccaacttcgataacatcggctacgcctggataagcatattccaggttgtcaca
ctggaaggatggtcaaacatcatgttttatgtcatgaatgtgtattccttctggagtttc
ctctatttcatatttgttgtcattatgggctcctacatcatgatgaacgtgtgcggcgtc
gtcatctccacccagttctcagacaacctggagcacctgagaagacgggaaaccaggagg
gagaatagcgacgtgttaggtgaatggctctgctccaagtggaccggctgcctggcagtc
atcagacggcgtgcatccaacagggtgcaccaccatgacgacgacagcagggccgacgac
ttgacggtcaagggtcacatttggggacagctcaggacgagactcgagaaagtcgtcaac
agtaaagtcttcgaccggctgatcgcgtgcgcagttctcctcagcattctcaccctggcc
attcagcatcataaccagccaaacgtgttgaccaacatcttgcagatctgtgacctcacc
ttcaccgtgatcttcgtggtggagatgctcttaaagtggatggttctcaagtgggcgtac
tttgaggaccgaaacaacttgctccactttgtcatcgtcatcatcagtctttcggagatg
agaaccaaagaagacgactggttgtcggtcctccgagctttccgcctgctgcactacctc
ccttacctaaggacacagctgctggtgctgaagaaggccatgcaggaggccgcttcgctc
tgcatgctcatcctttttgtcctctttgttttcaggcacgtgcacgcaccgatcctctct
gccccacctgtctgcttggagacgtgtggccgccacccacccgattcacacattccactg
actgtctcccacctttttttcctcttcctctgcagtctggtgggcatgcatctgttcggt
catgggttagacacacggaacacaatcaatgacaggaagaactttgacacgctgctctgg
tccatggtcaccgtgttccagattctgacggaggagaactggaacacggtgctgtacaac
atcatggcggaaacctctccgtgggccttcatctacttcgttgcggtcatcgtgatggga
aagcacgtccttctcaacatcctcgtgggtattgtccatcagggcttccaagacaggcga
acacttggcgagagcccttcctccgtgacctcttccccgacctcagaggacggttctgca
gatacaaacggcgatgaggaaaaccgaacacttggccagagcccttcctccgtgaccccg
accccgaccgttgagcacggttctgcagatgtaaacggcgatgaggtaaacagatctcag
aaccgaaaccagacggcgctgcgctggtgcaaaaagcgtgaagagtggtcattctacgtg
ttgtctccccagaacaggctccggctcttttgcaagagtgtgacgtctcaccatttgttc
gaatacacagttctcctctttattctcctaaactgtatcaccattgcaatggagagacct
ggaattgagcctggaagcaaggagcgaacgttcttgaccatctctggtttcgtcttctct
gcggtcttcatggtagagatgctttttaaggtcctgaccctcggcctgttcattgggagc
gagagctactgccgctctgcctggaatatcgtggacgggttgctggtggtcgcctccgtg
gtcgacatcgtcgtcttgctgtcccttgcaagccacagcaaaatgttggacatcctcaaa
gtgctgcgcctgctgcgcatacttcgtgcgctgcgggtggtcaagcgatccccgaaactg
aagctggcggtggaggctctgatcatcgccgtcaaacccgtcgggaacatcttgctcctg
tgctgcgccctcatcttgttctacgcaatcctcggcttgcagttgttcaaggggaagttc
tacatctgcagaggcgagttcattgatgacgtcaccaacaagacggactgtctgtcggcc
aaccagcgctgggagctgaaggatttcaattttgacagcttgccgcaggccctgctttca
ctgttcgtgatgtactccaaggacggctgggtgaccctcatgtatgatggactggacgcc
gttggagtggaccaacagcccatgatcaactacaatgtatggatacttcctttcttcatc
tccttcatgatcgtgagctatttcttgctcgacatgttcatcggcgtgatggtgcacacc
ttccacgactgtcagaagaaacaaaataaactgtctgaggaggcgagaaacagcttgcgg
cgcggcgcaggcgaggatgttgctgaggttcccaaggagacgccgtaccaagcgtcctac
tcccgcatgcgtctgtccatccacaccctgtgcaccagcgggccgctggacctcttcata
gccgtcctgattgtcatcagtgttttgatcatggccgtcgagcactaccaagaacctctg
tacatcaagaggttgacagagtactcccactacgtgttcacctccatcctgttgattgaa
gtcctgctgaagctcgtggcgtttggcgggctgagattcctgcgaaacagttggaacctc
gtggacctcgtgatcgtctcggtatccatcacgagcatcgctttaaacatgatgagtgtg
tcacagcaagttcctgtaaatcccaccatcctgacagtcctcagagtgctgaggatggga
caagtcctgaaggccaaaaggattcgtgtcctgctgacaacaatcggcaaaacgctgtcg
caggttggaaacatttgtctcctcttcctgttcttctttaccatctacgcaacgctagga
gtggagttctttggccatctagaatgcgccgaggacgaactgtgcctcggattaaacgag
tatgtcaatttcaagcacttcggcatggccctgttcaccctcttcctggtgtgcaccggg
gacaactggagcatgatcatgatggacaccttgaagcagtgccgtcctggagagtgttca
ctctacctcacgtgggtctctccgatatacttcatcacctttgtggtcatcgcacagttc
gtgctcgccaacctcgttgtggccgtcattgtgcaagctttggaggacagcaacaaggac
gaaggagtgtctggactgtctactgctattctcgctgactaa
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