Gasterosteus aculeatus (three-spined stickleback): 120824758
Help
Entry
120824758 CDS
T07457
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6b
KO
K21988
transmembrane channel-like protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120824758 (tmc6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gat02000
]
120824758 (tmc6b)
03037 Cilium and associated proteins [BR:
gat03037
]
120824758 (tmc6b)
Transporters [BR:
gat02000
]
Other transporters
Pores ion channels [TC:
1
]
120824758 (tmc6b)
Cilium and associated proteins [BR:
gat03037
]
Other cilia and associated proteins
Stereociliary proteins
120824758 (tmc6b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
120824758
NCBI-ProteinID:
XP_040041719
LinkDB
All DBs
Position
9:6905023..6916556
Genome browser
AA seq
835 aa
AA seq
DB search
MAQRVNFDLDHLLIESELESPVDEEGVHDSFSRLIAEQRDHRGASDAVELQQLQRQLHEE
DPYDVASLSSPGHVFRDRRQGQRNVGREEDVNLGDPLLGERWSSATMRVLSSMPSRTIGR
SRGAIISQYYNRTMQLRRRRQSRPAIRDFPHSARPSIRGYGIEVDTTDAEVSKRDRLVNN
LQNLSVGDRIRMLRAMPLNLTEKRNLRQSTLHQGKNPISASHIPCCSQLKYYIIIGARQS
WYSWLSFLHSLQLWQVPLKRVSGRFGTGVLSYFLFLKTLLFFNFFLFLVTGAFLVLPQAI
HPPVLPAGRRSFVGLELLTGAGYFSDTVMYYGYYCNYTLSSSCRDEDGGQNVSLSNGTRP
DCTSKRLSYNMPLAYFSTIGVSFFITCIILVYSMSKSFGRSFRIDNSHSILAMKVLCSWD
FKVIKKSSVKLMSENICTQVKELLAEVNHKHVKNTGCQKLWRMMVHGLAWAICIASTTAC
VLAIYYFSDHMHRNLQRSSRSAPQQPLLDEASLLALPVVVSLINLLLPGLFNLAAWMEDY
DSPSVRTYVAIGRNLMLKVSVLGVLCYHWLGRVAADPKIIGQECWESFVGQELYRFLLVE
FIFTLLDTLFGEFLWRLFSEKVLKRRRKPVFDIARNVLELIYGQTLAWLGVLFTPLLPAV
QICKLLLLFYIKMSSVMMNCQAPRKPYRVSQMTTVFITLLCFPSFLGASVCVTYTMWSLT
PSSSCGPFRKLKTMFQAGKRWVEALEKDNPNLSVLARAHSYLVENPFFLFVGAGIFLVVI
YFHSQVVDGQRKIIALLQEQIENEGEDKKFLITRLQSIHERRKTPAQRLTSQESR
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcgtgtcaactttgacctggaccacctgctcattgaatctgaactggagagc
cccgtggacgaggaaggcgtccacgactcgttcagtcggctgatcgcggagcagagggac
catagaggagcctctgacgccgtggagctgcagcagctgcagagacaactgcacgaggag
gatccatacgatgtggcctccttgtccagccctgggcacgtgttcagggacaggaggcag
ggacagaggaacgtgggaagggaggaggatgtaaacctgggagaccccctcctaggcgaa
cgttggtcctcagcaaccatgagggtcctgtcctccatgcccagtcgcaccatcggtcgc
agcaggggagccatcatctctcagtactacaacaggaccatgcagctccggagacgcagg
cagagcagacccgccatccgggacttcccccactccgcccggcccagcatacgaggctac
ggcatcgaggtcgacactacggacgcagaggtgagtaagcgggatcgtttggtgaacaac
cttcagaacctgtcggtgggcgacagaatccggatgctcagagcgatgcctctcaattta
actgagaagaggaatctccgccagtcaactttacatcaggggaaaaacccaatctctgcc
agtcacatcccctgttgcagtcaactcaaatattacatcatcattggtgccagacagagc
tggtacagctggctgtccttcctgcactccctccagctgtggcaagtgccgctgaagaga
gtgagcgggcgttttggcaccggcgtcctctcgtacttcctgttccttaagaccctgctc
ttcttcaacttcttcctcttcctggtgacgggggccttcttggtgctgccccaggcgata
caccctcccgtgctgcccgcggggagacgctccttcgtcggactggagctcctcaccgga
gcgggctacttctcggacacagtgatgtactatgggtactactgtaactacacactgagt
agcagctgcagggatgaagatggaggccagaacgtctccttgtccaatgggaccaggccg
gactgcacgtccaagcgcctctcgtacaacatgccgctcgcgtacttctccaccatcgga
gtctctttcttcatcacgtgtatcatccttgtgtacagcatgtccaagtcgtttggtcgg
agcttcagaatcgacaactctcacagtattttggccatgaaggtcctctgctcctgggac
ttcaaggtcattaagaaatcctctgtcaaactcatgtctgagaacatctgcacccaggtc
aaggagctgctagcggaggtgaatcataagcatgtcaagaacactgggtgccagaagctg
tggagaatgatggttcatggcctggcctgggctatctgcatagcgagcaccaccgcctgt
gtgctcgctatttactacttctctgatcacatgcatcggaacctccagcgaagttctcgt
agtgccccccagcagcccttgttggacgaggccagcctgctggctctccctgtggtcgtc
tccctcatcaacctgctgctgcccggcctgttcaacctggcagcctggatggaggactac
gactcgccgtcagtacgcacatatgtcgccatcggcagaaatttgatgttaaaagtaagc
gtgctgggagtcctgtgctaccactggctgggtcgtgtggctgcggaccctaagattatt
gggcaggagtgttgggagagttttgtgggccaggagctttatcgtttccttctcgtggag
ttcatcttcactctactggacaccttgtttggggagtttctttggaggttgttttctgag
aaggtgctgaagaggaggaggaagcccgtgtttgatatcgccaggaacgtccttgagctc
atctatggacagacattggcctggttgggcgttctcttcactcctctccttcctgcagtg
cagatttgcaaactcctgctactattctacattaaaatgagcagcgtgatgatgaactgt
caggcccccaggaagccctacagggtcagccagatgacaaccgtcttcatcactctcctc
tgcttcccctccttcctcggggcctctgtgtgtgtcacatacaccatgtggagcctcacg
ccctcctcatcgtgcggtccgttccgcaagctcaaaacgatgttccaggcggggaagcgg
tgggtggaagcactagaaaaagacaatcccaacctctccgtgctggccagggctcactcg
tacctggtggaaaaccctttcttcctgtttgtgggagcaggcatcttcctggttgtcatc
tacttccacagtcaggtggtggacggtcaaaggaagattatcgcattgctacaggaacag
atagaaaacgagggagaggataagaagtttctaatcactcgcctccagtccatccacgaa
aggagaaaaactcctgctcaaagactcaccagtcaggagtcccggtga
DBGET
integrated database retrieval system
