Gasterosteus aculeatus (three-spined stickleback): 120824831
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Entry
120824831 CDS
T07457
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120824831 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120824831 (exosc1)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120824831 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
120824831 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
120824831
NCBI-ProteinID:
XP_040041857
UniProt:
A0AAQ4NPE1
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Position
IX:complement(7294714..7297931)
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AA seq
194 aa
AA seq
DB search
MSPMKLCVPGEKLCSLEDCIEGTGVYPRHGYIYSSLAGYVLKKNEGGQLPVISVVRETET
QLLPNVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFKGTIRKEDVRATEKDKVETYKS
FRLGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHSKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccatgaagctgtgtgttcctggtgagaagctgtgcagtttggaggactgcatc
gagggcacaggagtatatccgcggcacggctacatatactcctcactagcgggctacgtg
ctcaagaaaaatgagggagggcagttaccagtgatctcagtggtgcgggaaaccgagaca
caactactacccaatgtaggagcaatagtcacctgtaaggtgacaagtatcaaccccagg
ttcgccaaggttcacatcctttatgtgggatccacaccgctgaaggaccgcttcaaagga
acaattaggaaagaagatgtgcgcgcgacagagaaagacaaggtggaaacatacaaaagc
ttcagacttggggacatcgtcttggcgaaagttatttctcttggtgacgtgcagtcaaac
tacctgttgacaacagcggagaatgaactcggggtggtggtggcacacagtgaagcaggt
gcccagatggttcccatcagctggtgcgagatgcagtgtccacgaacgcacagcaaagag
ttccgcaaagtggcgcgtgtgcagccggagtacctgcaagcatga
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