Gasterosteus aculeatus (three-spined stickleback): 120825005
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Entry
120825005 CDS
T07457
Symbol
zeb2b
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger E-box-binding homeobox 2b
KO
K23560
zinc finger homeobox protein 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120825005 (zeb2b)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120825005 (zeb2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_6
Homeodomain
zf-C2H2_15
Csm1_N
DUF3138
zf-C2HE
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
120825005
NCBI-ProteinID:
XP_040042240
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All DBs
Position
I:28763494..28778852
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AA seq
1215 aa
AA seq
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PHRPSFVSPCEAALSYENVVETGSETEEEDKLPASEEDPMINGAGSPASLTNPEASPRAE
SHGLLTKEEEDEDEMRDSGVEHIWPDNDMLSASVDGTDEIKDDFDALGPDAALQAVGNGT
VKSVDCTSEFEDFLGKRKLDDGDSHVASIAEYLQRGDTAIIYSEAPEELSRLGTPEPPGR
RERDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEENFACPLCNYTFAYRT
QLERHMATHKPARDQHQLLNQAAGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECPN
CKKRFSHSGSYSSHISSKKCIGLIAVNGRMRGNMKTGSSPTSSSSSPTNTAITQLRQKLE
NGKPLGLPDHGNHLSIKTERLDFNDYKLMMASDGWDGGPRALHGTGHGRDQPLGVHHSSS
XQSPLHPLGMAGLESQLLCYPGPLGNNLSEVQKVLQIVDNXVCRQKMDCKPEELSRLKAY
MKELGSQVEEQKQALTSAGIQGGLPLINHNGATKSIIDYTLEKVNEAKACLQSMTTDSKR
QISNIKREKSNHMLEGGAEEKVQENLLFTPYACQYCKESFTGPIPLHQHERYMCKMNEEI
KAVLQPAESLMANKPPMFMEKSNHMTSSVLSEKGFAGPLNPYRDHMSVLKAYFAMNMEPN
SEELHKISIAVGLPQEFVKEWFEQQKMYRYGTARTPPLENRHNMDMAVGTNNHHHHTPPK
DSLAARSPVSLMKPADRITSPSIAELHNNVNNCDNPLRHLKNHQFGGGGKPKGEKLDHSR
SNTPSPLNLSSTSSKNSHSSSYTPNSLTSEDLQAEPLDLSLPRLMKEPKHALTVRSRPKV
NSVAGDHGSXPSPREHFEEPLNLVYFKKEFSGSANNGNLEKSTSPIFGMNPFAGKPLYTS
LPPQSAFPPATFMPPMQASIPGLRPYPGMEQMGFLPHMAYTYAAGAATFAEMQQRRKYQR
KPGFQGDLLDGTADYMSGLDDMTDPDSCLSRKKIKKTESGMYACDLCDKTFQKSSSLLRH
KYEHTGKRPHQCQICKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHR
YSYCKREAEEREAAEREAREKGHLEPTELLMSRAYLQGMTPQGYPELAEREAILRHDAVN
GGIREGRKEAEGTYAKIGRRDEEFEEEEEESKSMDTDPDTLRDEEENGEHSMDDSSLDGK
TETKSDHEDAMEDGM
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
cctcaccgcccttcctttgtctccccgtgtgaagcagctctgagctacgagaacgtggtg
gagacgggctcggagacggaggaggaggacaagctgcccgcgtccgaggaagaccccatg
atcaacggcgccggcagcccggccagcctcaccaacccggaggcctccccgcgggccgag
agccacggcctgctcaccaaggaggaggaggacgaggacgagatgagggacagcggcgtg
gagcacatctggcccgacaacgacatgctgagcgcctccgtggacggcaccgatgaaata
aaggatgatttcgacgccctggggcccgacgccgctctgcaggcagtcggaaacggtaca
gtcaagagcgtcgattgcacttcggagttcgaggacttcttaggcaagcggaagctggac
gacggcgacagccacgtggcgagcatcgccgagtacctgcagcggggcgacaccgccatc
atctactcggaggccccggaggagctgtcccgcctgggcacgccggagccgccgggccgg
agagaacgagacctgccacctggaacgccagatgccttcgcccaactgttgacctgcccc
tactgcgaccggggctacaagcgcctgacatcgctgaaggagcacatcaagtaccgccat
gagaagaacgaggagaacttcgcctgcccgctctgcaactacacgtttgcttaccgcact
cagctggagcggcacatggccacacacaagcccgccagggaccagcaccaactgctcaac
caagcggccggcaaccgcaagttcaagtgcaccgagtgtggaaaggccttcaagtacaag
caccacctgaaggagcacctccggatccacagcggtgaaaaaccgtacgagtgccccaac
tgcaagaagcgcttctcccactcgggctcctacagctcccacatcagcagcaaaaagtgc
atcggcctgatcgccgtcaacggcaggatgcgcggcaacatgaagacaggctcctccccc
acctcctcctcctcctcgcccaccaacaccgccatcacccagctgcggcaaaagctggag
aacggcaagccgctcggcctccccgaccacggcaaccacctgagcatcaagacggagcgg
ctcgacttcaacgactacaagctgatgatggcgtcggacggctgggacggcgggcctcgg
gcccttcatggaacggggcatgggagggaccagccgctgggggtccaccacagctccagc
ngccagagccccttgcaccccctggggatggccgggctggagtcgcagctcctgtgctac
ccggggccgctggggaacaacctgagcgaggtgcagaaggttctgcagatcgtggacaac
nccgtgtgcaggcagaagatggactgcaagcccgaggagctctccaggctcaaggcctac
atgaaggagctgggctcccaggtggaggagcagaaacaggcgctgacctcggcggggatt
cagggcggcctcccgctgatcaatcacaacggcgccaccaaaagcatcatcgactacacg
ctggaaaaagtgaacgaagccaaagcctgcctccagagcatgaccacggactcaaagagg
cagattagcaatatcaaacgagagaaatccaaccacatgcttgaaggaggtgcggaggag
aaggtgcaggaaaacctcctgtttacgccgtacgcttgccaatactgcaaggaatccttc
accgggccgatacctctgcaccagcacgagcgctacatgtgtaaaatgaacgaggagatc
aaggccgtgctgcagcccgccgagagtttgatggccaacaaaccgccgatgttcatggag
aagagcaaccacatgacctcctccgtgttgtctgagaaggggttcgccgggcccctcaac
ccctacagggaccacatgtccgtgctgaaggcttattttgccatgaacatggagcccaac
tcggaggagctgcacaagatctccatcgcagtcggccttcctcaggaatttgtcaaggag
tggttcgagcagcagaagatgtaccggtacggcaccgccagaaccccaccgctggagaac
aggcacaacatggacatggccgtcggaaccaacaaccaccaccaccacactccaccaaaa
gactctttggcagctaggtcacccgtgtccctgatgaagcctgctgaccgcatcacctcc
ccctccatagcagagctccacaacaacgtgaacaactgtgacaacccgctcaggcatttg
aagaaccaccagtttggcggcggcggcaaacccaagggtgaaaagttggaccactcccgc
agcaacaccccgtccccgctaaacctgtcctccacatcttccaaaaactctcacagcagc
tcctacactcccaacagcctgacttcggaggacctgcaggccgagccgctggacctctcc
ctgccgagactcatgaaggagcccaagcatgcactgactgtccgcagcaggcccaaagtc
aacagcgtcgccggcgaccacggcagcngtccctcgccccgagagcacttcgaagagccg
ctcaacttggtctatttcaagaaggaattctcaggctcggccaacaacggaaacctcgag
aaaagcactagccccatcttcggcatgaacccgttcgccggcaaacccctgtacacgtca
cttccgccccagagcgctttcccgcccgccaccttcatgcccccgatgcaggccagcatc
ccgggcctcaggccctacccgggcatggagcagatgggcttcctaccacacatggcctac
acttatgccgcgggggcggctacctttgccgagatgcagcagaggagaaagtaccagcgg
aaaccaggtttccagggggacctgctcgacggtacagccgactacatgtcagggctggac
gacatgacagaccccgactcctgtctgtcgcggaagaagattaagaagaccgaaagtggt
atgtacgcgtgtgacttgtgcgacaaaacattccagaagagcagttcccttctaagacac
aaatatgaacacacaggcaagcggccgcaccagtgtcagatctgcaagaaggccttcaaa
cacaagcaccatctcatcgagcactcccgcctgcactcgggggagaaaccgtaccagtgc
gacaagtgcgggaagcgtttctcccactcgggctcctactcgcagcacatgaaccaccgc
tactcctactgcaagcgggaggccgaggagcgggaggcggccgagcgggaggcccgcgag
aagggccacctggagcccacggagctgctgatgagccgggcctacctgcagggcatgacc
ccccagggctacccggagctggcggagcgcgaggccatcctgaggcacgacgccgtgaac
ggagggatcagagagggacggaaggaggcggagggaacgtacgccaagatcgggcggagg
gacgaggagttcgaggaggaggaggaggagagcaagagcatggacacggacccggacacg
ttgagggacgaggaggagaacggagagcactcgatggacgacagctcgctggacggcaag
acggaaaccaaatcggatcacgaggacgcgatggaggacggcatgtaa
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integrated database retrieval system
