Gasterosteus aculeatus (three-spined stickleback): 120825022
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Entry
120825022 CDS
T07457
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120825022 (smc4)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
120825022 (smc4)
Condensin II
120825022 (smc4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
TPR_MLP1_2
Crescentin
ABC_tran
Motif
Other DBs
NCBI-GeneID:
120825022
NCBI-ProteinID:
XP_040042235
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All DBs
Position
I:complement(10512846..10529205)
Genome browser
AA seq
1293 aa
AA seq
DB search
MPSKTAKSSTAKPRGKGSQPRDDSGDELDGTPQETDPNGREDARPTTDSSGGEAVDNRSL
EEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYQGEQILGPFHKRFSCIIGPNGSG
KSNVIDSMLFVFGYRAQKIRSKKLSVMIHSSDKHKDVQSCTVEVHFQKIIDKEGDEYEVI
PSSKFYVSRTANKDNSSAYHINGKKATFKEVGALLRSHGIDLDHNRFLILQGEVEQIAMM
KPKGQTEHDEGMLEYLEDIIGSCRLKDPIQTLSRRIELLNEQRGEKLNRVKLVEKEKNSL
EGEKNKAVEFLTLENDIFKHKSQLCQYYVHDLQKRIVDKEQEKQKILEDTKELTEKNAKI
SQETEKMNQELKNVEKKQNKLNKYIETQKEKFTQLDLQDVEVREKIKHSKSKNKKLQKQL
EKDKEKLEEVRGVPASSEKAISEATARKEELEKQKVKEEKKLEAVMESLKEETSGLQQDK
ESKEKELMELSKAVNETRSRMDLAQSELDIYLSRHNTALTQLNTAKQTLQTTSDTLRERR
AAIKDLEVKIPQKEQELKKDEVALEQLMKTDSETREVVSEIRQKVDEAKSSLSSNRSRGR
VLDALMQQKKSGRIPGIFGRLGDLGAIEEKYDVAISSSCGALDNIVVDTIDTAQKCVMFL
KEQNIGFATFIGLDKMKVWERNMAPIRTPGDCPRLFDMVRVKDENVRPAFYFALRDTLVA
EDMEQATRMAFQKERRWRVVTLKGQIIEMAGTMTGGGRALKGRMGSSIGAEVSQEELDRM
ESKLNEKVSKLHDCQEKKLQLEENVQQLRRALRDMKNTQEKYANSMASLADQEAHLKLQI
KELEANVLAAAPDKAKQKQMEKSLEAFKKDYDAASSTAGKVENEVKRLHTLIVDINSHKL
KAQQDKLDTVNRGLDDCSSTITKARVAIKTADRNLKKCEESVTRVEGEIEENDKSMTELT
EQLKKLEDEAGEVMKACQEAEATLPEVQQQYQAVLKEIKVLQQQEHAMQEESLSVRLRVE
QIETTMSEHSNKIKHWQKEASKLSLHTVEGEPAEGLPVLTAHELAQISNPNVIINKMMTL
ETKSAQMKPNLGAIAEYKKKEELYLQRVAQLDEITTERDQFKRGYEDLRKQRLNEFMTGF
NMITNKLKENYQMLTQGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLS
SLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFEIA
DRLIGIYKTHNTTKSVGINPKTIVFKEHGAVTA
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgccctccaaaactgcgaagagctccactgccaagccgagagggaaagggtcgcagccc
cgcgatgactccggagacgagctggatggaacccctcaagaaaccgaccccaacggccgg
gaggatgcacggccgaccaccgattcgtccggaggggaggcggttgataaccgaagtttg
gaggagattctcggcagcatccctccgcccccgcccccagcgatgaccaatgaaccgggc
gctccccgcctgatgataacacacttagtcaatcgcaatttcaagtcgtaccaaggcgag
cagattctggggccctttcacaagcgcttttcatgcatcattggtccgaatggcagtggg
aagtccaatgtgatagattcgatgctctttgtgtttggctacagagctcaaaagatcaga
tcaaaaaagctctcagtgatgattcacagctccgataaacataaagatgtgcaaagctgt
actgtggaggtgcattttcagaagataattgataaggaaggagatgaatacgaagtcatc
ccaagcagcaagttctatgtttccaggacggcaaacaaagacaattcttcagcctaccat
atcaatggcaaaaaggccacatttaaagaggtgggggctttactccgcagccatggcatt
gacctggaccacaacagatttctgatcttacagggcgaggtggagcagattgccatgatg
aagcctaaaggacagacggagcacgacgagggcatgctggagtacctggaggacatcatc
ggctcgtgtcgcctcaaggacccgatccaaaccctgtcgcgccgcatagagctgctcaat
gagcagaggggagagaagctaaaccgagtgaagctagtggaaaaggagaagaattctttg
gagggagaaaagaacaaagctgtggagtttctcactctggaaaatgacatcttcaaacac
aagagtcagctctgccaatattatgttcatgatttgcagaagcgtattgtagataaagag
caggagaagcagaagatcttagaggacaccaaggaactaactgagaaaaatgcaaagata
tcacaagagacagagaaaatgaaccaagagctcaaaaatgtggagaagaaacaaaataaa
ctcaacaagtacattgagacccagaaggagaagttcacccagctggacctccaggacgtt
gaagtgcgtgagaagattaagcactccaagagcaagaacaagaaactgcagaagcagctg
gagaaggacaaagaaaagctggaggaagtgcgcggtgtaccagccagcagcgaaaaggcc
atctctgaggcgacggctcgcaaggaagagctggagaagcagaaggtgaaggaagagaaa
aaactcgaggcggtgatggagagtctcaaggaggagaccagcggtttgcaacaggacaaa
gagtccaaagagaaggagctgatggagctcagtaaggctgtgaatgagacccggtcccgc
atggacctggctcagtcggagctggacatctacctcagccgccacaacaccgctctgacg
cagctcaacacggccaagcagacactgcagaccacttctgacacgctgcgtgagcgccgt
gcagccatcaaagacttggaggtcaagatacctcagaaagaacaggagctcaaaaaggat
gaagtagcgctggagcagttgatgaagacggatagtgagaccagggaggtggtgagcgaa
attaggcagaaggtggatgaagcaaagagctcgctgtcgtccaaccgcagtcgaggaaga
gtcctggatgccctcatgcagcagaagaagagcggcagaatccctggaatctttggaaga
ttgggagaccttggagccattgaggagaagtatgatgtggccatttcgtctagttgtggc
gccttagataacatcgtcgtggataccattgacacagctcagaaatgtgtcatgttcctc
aaagagcaaaacattgggtttgccaccttcattggactggacaagatgaaggtgtgggag
aggaacatggctcccattcgcactccgggcgactgccctcgtctctttgacatggtgcgt
gtgaaagatgagaatgtgcgacccgctttctactttgccctgcgggacaccctggtggcc
gaggacatggagcaggccaccaggatggccttccagaaagagaggcgctggagagtggtc
accctcaaggggcagatcatcgagatggctggaaccatgaccggaggaggaagagcgttg
aagggcaggatgggctcctctattggtgccgaggtctctcaggaggagctcgaccgtatg
gagagcaagctgaatgagaaagtgtccaagctgcacgactgccaggagaagaagttgcag
ctggaagagaacgtccagcagctgcgacgagcgctcagagacatgaagaacacccaggag
aaatatgccaacagcatggccagtctcgctgatcaggaagctcacttgaagctccagatc
aaggaacttgaggccaacgtgctggctgccgccccagacaaggcaaaacagaaacagatg
gaaaagagcctggaggccttcaagaaagactatgacgcggcgtccagcacggctgggaag
gtggagaacgaggtgaaaaggctccacaccctgatcgtagacatcaacagccacaagcta
aaggctcagcaggacaagctggacacggtcaacaggggcctggatgactgctcctccacc
ataaccaaggccagagtggccataaagacagccgaccgcaacctgaagaagtgtgaggag
agtgtgactcgtgtggagggtgagattgaggagaatgacaaatccatgactgagctcact
gagcaactgaagaaactggaagacgaggccggggaggtcatgaaggcctgtcaggaggcg
gaggccacgctccccgaggtgcagcagcagtaccaggcggtgctgaaggagatcaaggtc
ctgcagcagcaggagcacgccatgcaggaggagtccctcagcgtccggctgcgcgtcgaa
cagatcgagaccaccatgtccgagcacagcaacaagatcaagcactggcagaaagaggcc
agcaagttgtcccttcacactgttgagggagagccagccgagggacttcctgtgcttacg
gcccacgaactcgcacaaatctccaatcccaacgtcatcatcaacaagatgatgaccctg
gagaccaagagtgcccagatgaagcccaacctgggggccattgcagagtacaagaagaag
gaggagctgtacctgcagcgtgtggctcagctggacgagatcaccacagagagggaccag
ttcaaacgcggctacgaggacctgcgcaaacaacgcctcaacgagttcatgaccggattc
aacatgatcacaaacaagctgaaggagaactaccagatgctcacacagggtggcgacgcg
gagctggagctcgtggacagtttggaccccttctcagagggaatcatgttcagtgtgcgt
cctccgaagaagagctggaagaagatctttaacctgtcaggaggggagaagaccctgagc
tccttggccttggtgtttgccctgcaccactacaagcccaccccgctctacttcatggat
gagatcgatgccgcgctcgacttcaagaacgtctccattgtggcctgttacatttatgag
caaacaaagaatgctcagttcatcatcatctccctgaggaacaacatgttcgagatcgct
gatcgtctcatcggcatctacaaaactcacaacaccaccaagagcgtgggaatcaacccc
aagaccatcgtgttcaaagagcacggagccgtgaccgcgtaa
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