KEGG   Gasterosteus aculeatus (three-spined stickleback): 120825047
Entry
120825047         CDS       T07457                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:gat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gat03036]
    120825047 (kdm4c)
Enzymes [BR:gat01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     120825047 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     120825047 (kdm4c)
Chromosome and associated proteins [BR:gat03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120825047 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN Tudor_3 PHD Tudor_5 LBR_tudor
Other DBs
NCBI-GeneID: 120825047
NCBI-ProteinID: XP_040042309
UniProt: A0AAQ4Q3L0
LinkDB
Position
9:complement(430690..452993)
AA seq 1603 aa
MAGAEVYTPANPTCKIMTFRPTMEEFKDFNQYLVYMESQGAHRAGLAKVIPPKGWKPRRT
YDDIDDLMIDAPIQQMMAGQSGLFTQYNIQKKPLSVQEFRRLANSDMYCTPRYLNYEDLE
RKYWKNLTFVSPIYGADVSGSLYDEDVEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTTFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLATGFFPNSFKGCEAFL
RHKMTLISPSILKKYGIPFDKITQEPGEFMITFPYGYHAGFNHGFNCAESTNFATVRWID
YGKVATQCTCSKDMVKISMEPFVKRFHPDRYANWMAGKDSAPPDHILATPSTTPELQSWL
QSRRKTKPANKSCTHSRMRSKRLRTSAQPIGLDGSSGLTGTKRKALSGPAGPKVRRTVAG
TSCREEEEKEKKREAQSKHTPNHSSAHLSGPCRQMCVVKVNRVESNSLGLLNTEPSHDSR
CLSGASPASALTKDLKAETGARDDPLRRSGSGVATPEGLARTQPKNNEPRCCSPERRDLC
TSQDCSAGVSPPEAGTLRSPSHTTGSSAAAGWVSSRPADLRAPPSSSPRGAEASSRTPNT
DCSTKTGAESDANGSAKAQTTDPVGHTLHINPHRATEASVEGGSYTACGSLSPSGHGRSL
EKTEENLPPPLLQRNAVDMPRLTLEPADKVGISPLPPVLIQEMPSLTPADDALPAAPKPR
PRGHQVAPVLQRETSASCPSSRRAERQEEAGSVMSNQPLTAGHAGRRRLGSPHDSDGAAV
SGSEGKTAHSTANAPHKTPSGGIREPAFAAEKGRPKLGNVDEASSRRPAASGLSSCGFLL
NGPSSNNAAASSSSSSPLCTQSDGHLASRHHAAYSPLHCTSENPYTEPKPFSSSIWKNFN
SQGPAVLIQSLHPELPSGFSHDPLPYTMWTEPRCKEVTDLEDAEHAFCQSGSREDGGVPL
TWAQLEPTSLVSVGAVEPPGLCGDFDLHRGEAEGSEALSLCRELGAQREAEQSRHSGSAV
SPLGTGRRQRDGVSDMEEGGSDVDEAEHRGGVEGESSSDSSNNEEEENDTSNCECEESGL
EPGEVCAYAALSVKRTTKSRRHPLRKPTARAVPTAVKQQAASDDEPPDASLEEDDEEEEG
DDDEDEEGEEGEEMEAWAKPLIYLWQNRKSCFTAEREFNAHAATMRPHCAVCTLFSPYEQ
AEDGAATVAKGSSSPSEGPARPCRGLRRTRPLVPEICFSFREQNFPPTPTNPLLQEDGTS
PLLYCQGCCLQVHASCYGVAAADLSEQWSCDRCAEGSFTAECCLCNLRGGALKKTQSDKW
AHVMCAVALPEARFSNEAKRSPIDTSGIPMQRYKLKCIYCGARGSGKRRPGACVQCSCGR
CPTSFHVTCAHAAGVIMEPDDWPYVVSITCHRHQSRSSAAKQRACQAPVSLGQTVICKHK
NLRYYSSKVTQVTSQTFYEVMFDDGSFSNDTYPEDIVSRDCMDLGPPEVGEAVQVKWPDG
LFYGAKYLGSNVSHMYQVEFEDGSQVLAKREDVYTVEEDLPKKVKRRLSSASSMRFQDAF
FTTQGERKRQRTPNSRFQKDYVALPGLRGAAKSSWEQRGHKGN
NT seq 4812 nt   +upstreamnt  +downstreamnt
atggcgggggcagaggtttacacccctgcgaaccccacctgcaagattatgaccttcagg
cccaccatggaggaattcaaggacttcaaccagtacctggtctacatggagtctcagggt
gcacaccgcgcaggcctggctaaggtgattcctcctaaaggctggaagccccggcgtacc
tacgacgacatagacgatctaatgattgatgctcccatccagcagatgatggctggccaa
tcagggctcttcacacagtacaacatccagaagaagccgctcagcgtgcaggagttcagg
cgattagccaacagtgacatgtactgcacacctcgctacctgaattatgaagacctcgag
agaaaatattggaagaacctcacttttgtatcgcctatatatggtgctgatgtcagtggc
agcctctacgacgaggacgtggaggagtggaacattggccacctgaactccatcttggat
gtcattgaggaggactgtggcgtgtccatccagggggttaacaccccgtatctgtacttt
ggcatgtggaagaccaccttctcctggcacacggaggatatggacctgtacagcatcaac
tacctgcactttggagagcccaagtcctggtacgccatcccccccgagcacgggaagaga
ctggagcgcctggccaccggtttctttcctaacagcttcaagggctgtgaggcttttctt
cgtcacaagatgactctaatctccccgtccatacttaagaagtacggcattccctttgat
aagattactcaagaacctggagagttcatgatcaccttcccttacgggtaccacgccggc
ttcaatcatggcttcaactgtgcagagtccaccaactttgccacagtgcgctggatcgac
tacggcaaagtagccacacagtgcacgtgtagcaaggacatggtgaagatctccatggaa
cccttcgtgaagcgctttcatcccgaccgctacgctaactggatggcgggcaaagactcg
gccccgcccgaccacatactcgccactcccagcacaacgccggagctgcagagctggttg
cagagtcggcgcaaaaccaaacctgccaacaaaagctgcacacactctcgaatgcgctcc
aaacgcctcagaaccagcgcgcagcccatcggcctggatggcagctcgggtttgaccggc
accaagaggaaagccctcagcggtccggccgggcccaaggtgcgaaggactgtggcgggg
acaagctgcagggaagaggaggagaaagagaagaaaagggaagcgcagtccaagcacacc
ccgaatcactcatcggctcacctctctggtccttgcagacagatgtgtgtggtcaaggta
aatcgcgtagagagtaatagtttgggacttttgaatacggagccgtcccatgactcccgc
tgcctctccggtgcctcccctgcttcagcactgacaaaggacctaaaggcggagacgggc
gcacgcgacgaccctctacgccgctcagggtcaggggtcgcgactcctgaaggtctcgca
cggacgcagccgaaaaataacgagccccggtgctgctctcctgaacggcgagacctctgc
acctctcaggactgctctgccggggtctctcccccggaggccggcacactgcgctcaccg
tcccacacaacgggctcctccgccgcggcaggttgggtgagctcgcgtcccgccgacctc
cgagctccgccatctagctccccgcgtggagcagaggcttcaagccggacgccaaacacc
gactgcagcacaaagactggcgctgagagcgacgctaacggcagtgctaaggcacagacc
acagacccagtcggtcacacgctacacataaatccacaccgcgctacagaagcatccgtg
gagggcggtagttacacggcatgtggctccctctccccttcggggcacggtcgcagtttg
gagaaaaccgaggagaacctccccccccctctgctacaaaggaatgcagtggatatgccc
cgactcactctggaaccggcagataaggtcggcatctccccgttgccccccgtgctgatc
caggagatgccgtcgctcaccccggccgacgacgcgctccccgccgccccgaagccgcgc
ccgcgtggccaccaggtggcgccggtgcttcagcgggaaacgtcggccagctgtccctcc
tcacgccgagcggagcggcaggaggaagccggctccgtgatgtcaaaccaacctctgacc
gcagggcacgccggccggcggcgtttaggttccccacatgactccgatggggcggcagtg
tcgggttcagaagggaaaacggcccattcaaccgccaacgcgccgcacaaaacgccctct
ggcggtatccgtgagccagcatttgctgcagaaaagggccgtccaaagctgggaaatgtg
gacgaggcttcgtcccgccggcccgctgcatccggtctgagcagctgtggcttcctttta
aatggcccctcaagcaataacgccgccgcctcctcctcctcctcctctccattatgcact
cagagtgacggtcacctggcatcacgacaccacgccgcctactcccctttgcattgtact
tcggagaacccgtacacggagcccaaacccttctccagcagcatctggaagaacttcaat
tcccagggtcccgcagtgctcatccagagtctgcacccggagctcccctccggcttcagc
cacgaccccttgccttacaccatgtggaccgaaccgcggtgcaaggaggtcacggacctg
gaggacgccgagcacgccttctgccagtcggggagccgggaagacggaggcgtgcctctc
acctgggcccagctcgagcccacctcgctggtttcagtcggtgccgtcgagcccccgggg
ctttgtggggattttgacctccacagaggggaagcggaggggtccgaggccctttccctg
tgcagggagctcggcgcgcaaagggaggcggagcagagccggcactcgggatctgccgtt
tcgcccctcgggacgggaaggagacaacgggacggtgtgtctgatatggaagaagggggg
tctgacgtggacgaggcggagcaccgaggtggggtcgagggagagagcagtagtgactcc
tccaacaacgaggaggaggaaaacgacacgagcaactgcgagtgcgaagaatcgggcctg
gaacctggggaggtttgtgcctacgctgcgctgtcagtgaagaggacgactaagagccgg
cgccacccactcaggaagcccaccgcgagggccgtgcccactgccgtcaagcagcaggct
gccagtgacgacgagccccctgacgcaagcctggaagaggacgacgaggaggaggagggg
gacgacgacgaggacgaggagggagaggagggggaggaaatggaggcgtgggcgaaaccc
ctcatctacctgtggcagaacaggaagagctgcttcacggcggagagggagttcaatgcc
catgcagccaccatgcggccgcactgtgccgtgtgcacactgttcagcccttatgagcag
gcagaagacggcgcagctaccgtagcgaagggctcctcctctccgtcggagggccccgcg
cggccctgcagaggtctgaggcggactcgccctctggtccccgagatctgcttctctttc
cgggagcagaactttcccccaactcccaccaacccgctgctgcaggaagacggcacctcc
cctctgctctactgccagggctgttgcctgcaagtccatgcaagttgctacggtgttgct
gcggccgatctcagcgagcagtggtcgtgcgaccgctgtgcggaaggaagctttacggca
gaatgctgtctgtgtaacctcagaggtggagctctgaagaaaacccaaagcgacaaatgg
gcccacgtcatgtgtgccgtagcactgccagaggcacggttcagcaacgaagccaagagg
agtcccatcgacaccagtgggatccccatgcagcggtataaactgaagtgcatctattgt
ggtgcgcgcggctcggggaagcggcggcccggcgcttgtgtccagtgctcatgtggccgg
tgtcccacctcctttcacgtgacctgtgcccatgctgccggcgtgatcatggagccggat
gattggccgtatgtggtgtcaatcacctgccatagacatcaatcacggagctcggcggct
aagcagcgcgcgtgccaagcgccggtctcactgggccagacggtaatctgcaagcacaag
aacctgcgctactacagctcaaaggtcacccaggtgacctcccagaccttctacgaggtc
atgttcgatgacggctccttctccaacgatacctaccccgaggatatagtgagcagagac
tgcatggacttggggcctccagaagtgggggaagctgttcaggtgaagtggcccgacggg
ctgttctacggggccaaatacctgggatccaacgtatcgcacatgtatcaggtggagttt
gaggacgggtctcaggttctggcaaaaagagaagacgtctacactgtagaggaagacctg
cctaaaaaggtgaaacgtagactttccagcgcctcaagcatgcgtttccaggacgccttc
ttcaccacgcagggcgagaggaagcggcagagaacccccaattcccgcttccagaaggac
tacgtggccctgccgggcctccgcggggcggccaagagctcgtgggagcagcgcggccac
aaggggaattga

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