Gasterosteus aculeatus (three-spined stickleback): 120825071
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Entry
120825071 CDS
T07457
Symbol
tsku
Name
(RefSeq) LOW QUALITY PROTEIN: tsukushin
KO
K08130
tsukushi
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gat00535
]
120825071 (tsku)
Proteoglycans [BR:
gat00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
120825071 (tsku)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_6
LRR_14
LRR_EndoS
LRR_NXF1-5
LRRNT
LRR_MHP1-HER1-GIP3
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
120825071
NCBI-ProteinID:
XP_040042365
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All DBs
Position
1:3613348..3618401
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AA seq
348 aa
AA seq
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MALLLWFGMSLLASVQSSGVKNCHRDCRCEVESFGLFDSFSLTRVDCRGLGPDTPMPISI
PLDTAHLDLSSNALGPLSDSMLAGPGYTTLVSLDLSSNLITKVTPSALSKLRYLETLDLS
HNRLESLSTSCFAGIPLVEVDLSHNGFHEFDMDVFATKVSGEPVSVDLSCNKLASVSATS
RGRVLHVQSLNLSSNRLPSVPRLAGLSLRYLNLDGNPIARVEEGAFAELTDLVYLSISSL
HELREIRARGFKGLRSLQVLDLSNNPQLKTLSPAVFSGLDSLQELNLSGSGVASLPNNML
SNLPSIKSITLGQSVHCWRTQKQGQFHRQLGQVQHDEVLSCDVEGIVL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcctcctctggttcggcatgtcgctgttggcctccgtccagtccagcggcgtc
aagaactgccaccgcgactgccgctgcgaggtggagagcttcggcctgttcgacagcttc
agcctgaccagggtggactgccgggggctgggacccgacacccccatgcccatctccatc
ccgctggacaccgcccacctcgacctgtcctccaacgccctgggcccgctcagcgacagc
atgctggccgggccgggctacaccaccctggttagcttggacctgagcagcaacctcata
acaaaggtgacacccagtgctttgtccaagctgcgttacctcgagactctggacctgagc
cacaaccgcctggagagcctctccaccagctgcttcgccggcatccctctggtggaagtc
gacctcagccacaacggcttccacgagttcgacatggacgtgttcgctacgaaggtcagc
ggtgagcccgtcagcgtggacctgtcctgcaacaagctcgcgtccgtctcggcgacctcg
cgcggcagagtgttgcacgtccagagcttgaacctgtcgtccaaccggctgccgagcgta
ccgaggctggcggggctttcgctgaggtacctcaatctggacggtaaccccatcgcgcgg
gtggaggagggagctttcgccgagctgacggatctggtttatttgtccatcagcagcctc
catgagctgcgggagatccgggcacgcggcttcaagggcctgcggagcctccaggttctt
gatctctcgaataacccgcagcttaagactctgagcccggcggtcttcagcggactggac
tccctgcaggagctgaatttgtccggctccggtgtggcgtccctgcccaataacatgctg
agcaatctgcccagtattaagagcatcacactgggacaaagcgtccactgctggaggacc
cagaagcagggacagtttcaccggcaactgggccaggtccaacacgacgaggtgctgagc
tgtgacgtggagggcatcgtgttgtga
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