Gasterosteus aculeatus (three-spined stickleback): 120825155
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Entry
120825155 CDS
T07457
Symbol
exosc9
Name
(RefSeq) exosome complex component RRP45 isoform X1
KO
K03678
exosome complex component RRP45
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120825155 (exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120825155 (exosc9)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120825155 (exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF6659
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
120825155
NCBI-ProteinID:
XP_040042533
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All DBs
Position
IX:complement(9770416..9774139)
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AA seq
436 aa
AA seq
DB search
MKETLLSNCERDFLLQAIAEKKRLDGRQTYDYRKMKITFGTDYGCCFVDLGKTRVMAQVS
CELVAPKESRPNEGIMFFNIELSPMASPTFEQGRQSELSVKLNRQLERCLRNSKCIDTES
LCVVSGEKVWKIRVDVHVLNHDGNLMDVASIAAITALCHFRRPDVSIQGDEVTVYSPEER
DPIPLSIYHMPISVSFSFFQQGTYLLVDPCEREERVMDGLLMIAMNKHREICSIQSSGGI
MLLKEQVMRCSKIASVKVSEITELLIKALENDKKARKEGGRCGFAESMPQERITALKFEE
TSVEMTDVAERASDVVQGAEAPPLMVPSPVVPVPGVGQVGLGLQNTWGLEEEDDDEEEEA
EECANRGEEGEEKVTKMEVERHKKDASREEDVVVLSDSEEEEVVVLHPETSAKTPNTAGP
RSHQNGAATSKKRKKK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagacgctgctgtctaactgtgagcgggatttcttgctccaagcgatcgcagag
aagaagcgtctggatggacgacagacgtacgactacaggaagatgaagatcacttttggg
accgactatggatgctgctttgtggatctgggaaaaaccagggtcatggcccaggtctca
tgcgagcttgttgctcctaaagagagccgaccaaacgagggaatcatgttcttcaacatc
gagctgtcacccatggcttcgccgacatttgaacaaggcagacagtctgagttgtcggtg
aagttaaacagacagctggagagatgcttgaggaactccaagtgcatcgatactgagtcc
ctgtgtgtggtgtctggagaaaaggtgtggaagatcagagtggacgttcacgtgttgaac
catgatggcaacctgatggacgtggccagcatcgccgccatcaccgctctgtgccacttc
agacgcccggacgtcagcatccagggggatgaggtcacggtgtacagtccagaggagaga
gaccccattcctctgagtatctaccacatgcccatcagtgtcagcttctccttcttccaa
caaggaacctacctgctggtggacccctgtgaacgggaggagcgggtgatggacggcttg
ctgatgatcgccatgaacaaacatagagaaatctgctccattcagtccagcgggggcatc
atgttgcttaaagagcaggttatgagatgcagtaaaatagccagcgtgaaagtgtctgaa
atcacagagctcctaatcaaagccctggaaaacgataagaaagcaaggaaggagggcggc
aggtgtggtttcgcggagtccatgccgcaggagcgaatcacagcactgaaatttgaggag
acctcagtggagatgacggatgtcgcagaaagggccagcgacgtcgtccaaggagccgaa
gctccgccgctgatggtgccttcccccgtggtgcccgtccccggtgtgggtcaggtgggg
ctggggctgcagaacacctggggactggaggaggaggacgacgacgaggaggaagaagca
gaagaatgtgccaacaggggtgaagaaggggaggaaaaggttacaaagatggaagtggaa
cgccataaaaaggacgcgagcagagaagaagatgtggttgtgctatctgacagtgaagag
gaggaagtggtggttcttcatccagagacatcagccaaaactccaaacactgcaggaccc
agatctcaccagaatggggcagcaacatcaaagaaaagaaagaaaaagtga
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