Gasterosteus aculeatus (three-spined stickleback): 120825169
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Entry
120825169 CDS
T07457
Symbol
poll
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03410
Base excision repair
gat03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120825169 (poll)
03450 Non-homologous end-joining
120825169 (poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gat03400
]
120825169 (poll)
Enzymes [BR:
gat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120825169 (poll)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120825169 (poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
120825169 (poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
NTP_transf_2
PTCB-BRCT
BRCT_2
Ribosomal_S21
Motif
Other DBs
NCBI-GeneID:
120825169
NCBI-ProteinID:
XP_040042556
UniProt:
A0AAQ4QQY7
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All DBs
Position
IX:11394665..11400703
Genome browser
AA seq
564 aa
AA seq
DB search
MEQRHGIMKAFPKVKRARVSQRKDEPPVKKKTEEFDITGKTFDGITVHILPAGIGNARCQ
IFQRQIQQNGGQTESSLCPSVTHVVVDDNMDGDRALRLLKVDCMPPRVQLLKCMWLSLCI
SGKQLLAVDAYSLLLPKRESESRNEEDHLNVEPADETIAEAALDPNKQEKTAGVTVLDTK
EEVRGEEDGVSQSDLHALITGQQPKEETPGLSQDPSPDGAAQGVVSGKWVCAQSSQSKKN
NFNKHITDKLEVLAKAYTHQGDRWRALGYSKAVNALKSYHKPITSYQEACQIPGIGKRMA
DKIDEITESGHLRKLDHLGDAMPVLELFTNIWGAGTKTAQLWYQQGFRTLEDIRTKAHLS
NTQKIGLKHYDDFLDRMPREEAAAIEKVLKDATQAIDPGLMAMACGSYRRGKATCGDVDI
LISHPDGKSHKGVFSKVLQSLHESGFLKDDLVSHEENGEQKKYMGVCRLPGPGQRHRRLD
IIVVPYKEFACARMYFTGSAHFNRSMRALAKTKQMSLSEHSLNKDVVRRGNLKVYGGTPF
ATPTEEDVFSLLGIPYRPPHERDW
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcgtcacggcataatgaaagcctttcctaaagtcaaacgagccagagtgtca
cagagaaaggatgaacccccagtaaagaaaaaaacagaagaatttgatatcacaggaaag
acttttgatggcatcacagtgcacatcctccctgctggaataggaaatgccagatgccag
atctttcaaagacaaatccagcagaatggaggacagaccgagagttcactgtgtcccagt
gtcactcatgtcgttgttgatgacaacatggacggggacagggcgctgcgcctactaaaa
gtggattgtatgccccctagagtccaactactgaaatgcatgtggttgagcttgtgcatc
agtggaaaacaactactggctgttgacgcctacagccttcttttacccaagagagaatct
gaatcacggaatgaagaagatcatctgaatgtcgaaccagctgatgaaactattgcagag
gcagcgttggatccgaacaagcaagagaagaccgcaggcgtgacagttctggacactaaa
gaggaagtgcgaggagaagaagacggcgtctcacaaagtgacctgcatgctctcatcact
ggccagcagcccaaagaggagactcccggcctcagccaagaccccagtccagacggtgct
gctcaaggggtggtctcaggaaagtgggtctgtgcccagtcctctcaatccaaaaaaaat
aacttcaacaaacacatcacagacaaactagaagtgctggccaaggcgtacacacaccag
ggggacaggtggcgggcgctgggttactccaaggctgtcaacgcgctgaagagttaccac
aagcctattacatcatatcaggaggcttgccagatcccaggaatcggtaaacgcatggcc
gacaaaattgacgagatcacggagagcggccatctgcggaagctcgaccacctcggtgat
gccatgccagtattggagctttttactaacatctggggtgcaggaactaaaactgcacag
ctgtggtatcaacagggctttcgcactttagaggacatccgcacaaaagctcacctgagt
aacactcagaaaataggactcaagcactacgatgactttttagaccgcatgcccagagaa
gaagcagcagccatagagaaagtgctgaaggatgccacccaggccatagatccaggcctc
atggcgatggcgtgtggctcctatcgtcggggaaaggccacatgtggagatgttgacata
ctgatatctcatcctgatggcaagtcccacaagggggttttcagcaaagttttacagagc
ctccatgagagcgggtttttgaaagacgacctggtgagccacgaggaaaatggtgagcag
aagaaatacatgggtgtgtgccgtttgccaggacccggccaacgccaccggaggctggac
atcatcgtagtgccctacaaagagtttgcctgtgctcgcatgtatttcaccggatcggca
cactttaaccgctcaatgagagccctcgcaaagacaaagcaaatgagcttatcggagcac
tcgttgaacaaagatgtggtgcgtcggggtaacttgaaggtgtacggcggcactccattt
gctacaccgacagaggaggacgtttttagcctcttggggataccgtataggccgcctcat
gaaagggactggtga
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integrated database retrieval system
