Gasterosteus aculeatus (three-spined stickleback): 120825190
Help
Entry
120825190 CDS
T07457
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120825190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120825190
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120825190
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120825190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-RING_2
zf_RING_Vps8_fungal
PHD_NSD
zf_RING_Vps8
zf-UDP
WWE_5
zf-ANAPC11
PHD
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
120825190
NCBI-ProteinID:
XP_040042593
UniProt:
A0AAQ4RZ04
LinkDB
All DBs
Position
9:3029323..3046122
Genome browser
AA seq
749 aa
AA seq
DB search
MADSNNMLLASVVVVWEWLNEHGRWRPYGPAVSHQIEAAIRSSDPRGGSVVLGKVESRLS
PYIIDLQSMHQFRQDTGTIRPVRRSFYDPSSAPGQGWQWEWENDAGTWTAYDMEVAIAIE
NAHSRQQPCLDLTPIGFCYLIDFQNMTQVNRQSQRCRRLQRRADMSYPLVSGALPIPKGG
AVGGGLTGALLGVGVSGVSMGIGSSAPPNGGVQTPGLSQACSCPQCMLVFSVKTNTGGAG
IQTMGRRSLTMQRPKNFAPDSSKALSPSKSATLGRGQQQNSNANANYFQTLPHGLAISRN
ISSPRRNAQLFAQSLAALTAGTSSLGISSNRPPPPSLPPPQPPSSKPNLIPPSVPAKRSS
SSSANEPVPTATLVTPASSVTTPPSPVPSPSPMVMKPQHSVPSAGTACHAPLPQRSSLAG
LSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGITGILMSAAALPVCLTRP
PKLVLHPPPVSKSDVKPVAGFGHCCRKTTKKQARKGKTPEEVVKKYLQKVKSPPEEDCTI
CMEPLGGPSGYKGPGVGPVSRAESVGQLAQCGHQYHFQCLVAMYNNGNKDGSLQCPTCKT
IYGVKTGNQPAGKMEYHVIPHSLPGHPDCKSIRVIYNIPPGLQGPEHPSPGKPFTARGFP
RHCYLPDSERGRKVLRLLLVAWDRRLIFSVGTSSTTGESDTVIWNEVHHKTEFGSNLTGH
GFPDPGHLDNVLEELRAQGITEEVDGEVK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagtaacaacatgctcctggcctccgtcgtggtggtctgggaatggctgaac
gaacacgggcggtggcggccctacggccccgctgtctcccaccagatcgaggcggccatc
cggagcagcgacccccgcggagggagcgtggtcctcggcaaggtggaaagccggctctcg
ccgtacatcatagatcttcagtccatgcaccagttcaggcaggacacaggaaccatccgt
ccggtgcggaggagtttttatgacccgtcctcggcccccggtcagggctggcagtgggag
tgggagaacgacgcggggacgtggacggcctacgacatggaggtggccatcgccatcgag
aacgcccacagccggcagcagccctgcctcgacctgacgcccatcggcttctgctacctc
attgattttcagaacatgacacaggtgaacagacagagccagaggtgtcgcaggctgcag
aggcgcgctgacatgtcctaccccctcgtgtccggcgccctcccaatacccaaagggggc
gctgtcggtggaggcttaacaggagccctgctcggcgtcggggtttctggggtaagcatg
gggattggaagctccgccccccccaacgggggcgtccaaactcctggactgtcccaggcg
tgttcctgcccgcagtgcatgctggtcttcagcgtgaagaccaacacaggaggagcaggg
atacagactatgggcagacgctcgctaaccatgcagcggcccaagaactttgcaccggac
tcctctaaagctctgagtccgtctaaatccgccacgctgggtcgagggcagcagcagaac
tcaaacgccaacgccaactactttcagacgctgccgcacggcctcgccatctccaggaac
atctcctctccgagaaggaacgcccagctctttgcccagtcgctagccgccctcaccgcg
ggcacctcctctctgggtatctcctccaataggccgcctcctccgtccctcccgcctcct
cagcctccgtcatccaaacccaacctgatccctccgtccgttcccgccaagcgctcctcc
tcctcctcggccaacgaaccggtgccgaccgccacattggttacgccggccagcagcgtg
accacgcccccctctccagtgccatctccgtcgccaatggtgatgaagccgcagcactcg
gtgccatccgcgggaaccgcgtgccacgccccgttgccacagagatccagcttagctggg
ctgagcagaccagcgctacagaggattgcgatggctcagtccagagcgctcattgcatca
ggcgtgcccaccgtcccagtgaagaacctgaatggatccagcccggttcaccctgcactg
gccgggatcacgggcatcctgatgagtgctgccgctctgcccgtgtgtctgactagacct
ccgaaactcgtgctgcaccccccgcctgtcagcaagagcgacgtcaagcccgtggcaggc
tttggccactgctgcaggaagactaccaagaaacaggctcgcaagggtaaaactccagag
gaggtggtgaagaagtacctgcagaaagtaaaaagtccccccgaggaggactgtaccatc
tgcatggagccactggggggtccgtctgggtacaagggtccaggcgtggggcctgtgtct
cgggcagagtcggtcgggcaactcgcacagtgtggacaccagtaccatttccagtgcctg
gtggccatgtacaacaatggcaacaaggacggcagccttcagtgtcccacctgcaaaacc
atctacggcgtgaagacgggcaaccaaccggcggggaagatggagtaccacgtcatccct
cactctctgccggggcaccctgactgcaaaagcatccgcgtcatctacaacataccgcca
ggccttcagggaccggagcacccaagcccagggaagcccttcactgccagaggcttccct
cgacactgctacctcccagacagcgagagggggcgcaaggtactgagactgctcctggta
gcgtgggaccgtaggttgatcttctcggtggggacttcgagcaccactggagagtctgac
accgtcatctggaacgaggtccaccataagacagagtttggctccaacctgacgggccac
ggcttcccagaccccggacacctggacaacgtcctggaagagctccgtgctcagggcatc
acagaggaggttgatggagaagtgaaatga
DBGET
integrated database retrieval system
