KEGG   Gasterosteus aculeatus (three-spined stickleback): 120825231
Entry
120825231         CDS       T07457                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120825231 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gat03400]
    120825231 (aptx)
Enzymes [BR:gat01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     120825231 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     120825231 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     120825231 (aptx)
DNA repair and recombination proteins [BR:gat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     120825231 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     120825231 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA
Other DBs
NCBI-GeneID: 120825231
NCBI-ProteinID: XP_040042669
LinkDB
Position
IX:complement(13419531..13422257)
AA seq 365 aa
MPICWLISEEDSHKPIRLPQQQTVVLGRGPETTIKDKKCSRHQVELKAECNKGYVTVKQL
GLNPTSVDFAVVGKDNEVKMKAGQRLLIVNQLYPYTVQFNEDPARDHGGTKRPRELSSGD
RESRTQDSSLKAAKQSEKVPASIGQEEATKSSESFGHWSQGLKTSMQDPKLQVAVYVSVM
LNYLHLCEICYCLTYCLNLIFFLKVYKDDKVVVIKDKYPKARYHWLVLPWQTISSLKALR
EEHCDLVKHMQQVAERTVQQCPDANSLRFRTGYHAIPSMSHVHLHVISQDFDSPCLKNKK
HWNSFTTDYFMESQDVIQMLETNGRVNVKEGTSELLKLPLRCHMCRKDIPTIPALKEHLK
SHFPS
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgccaatatgctggcttatcagtgaggaggatagtcataaacccattcgactgccacag
caacagacagttgtcttgggtcgaggtccagagacgactattaaagacaaaaaatgctct
cgtcaccaagttgaattgaaagcagagtgcaacaaaggttatgtcacagtaaaacagttg
ggcttgaatcctacctccgtagattttgcggtggttggcaaggacaacgaggtaaaaatg
aaggctggacagcgtcttcttattgtcaaccagctctacccatacactgtacagttcaat
gaggatcccgccagggaccacggcggcaccaaaagaccacgagagctgtcttcgggggac
agagagagtcgcacacaggattcaagtctgaaagccgccaaacagtcagaaaaagtccct
gcgtcaatcggccaggaagaagctacaaaaagcagtgaaagctttgggcattggagccaa
ggtctgaaaacctccatgcaagaccccaagttgcaggtagcggtttatgttagtgtgatg
ctaaattatctgcatctctgtgaaatttgttactgcttgacttactgtttaaatctgatt
ttttttttaaaggtatacaaggatgataaggtagttgttatcaaagataaataccccaaa
gctcgctaccactggctggtcctcccgtggcagaccatttccagcctgaaggccttaagg
gaggagcactgcgacctggtgaaacacatgcagcaggtggctgagcggacggttcagcag
tgcccagatgctaactcgctacgattccgtacggggtaccacgccatccccagtatgagt
catgtacacctgcatgtgattagccaggacttcgactctccttgtttgaagaacaaaaag
cactggaactcatttacgactgactatttcatggagtcgcaggacgtcattcagatgctt
gaaacaaatggaagagtcaacgtgaaagaaggaaccagcgagttgttgaaactacctctg
cgctgtcacatgtgtcgcaaagatattcccactataccagctcttaaggagcacctaaag
tctcactttcccagctaa

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