Gasterosteus aculeatus (three-spined stickleback): 120825366
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Entry
120825366 CDS
T07457
Symbol
cfap52
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 52
KO
K24728
cilia- and flagella-associated protein 52
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gat03037
]
120825366 (cfap52)
Cilium and associated proteins [BR:
gat03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
120825366 (cfap52)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_like
Beta-prop_NWD2_C
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_LRRK2
WDR54
Beta-prop_NOL10_N
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
120825366
NCBI-ProteinID:
XP_040042892
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All DBs
Position
IX:complement(5230170..5239321)
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AA seq
615 aa
AA seq
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MSLETHGVPQLELEAVIGFNGYVSSGLRVDPDSEHLIYPLGCSVILKRIKGGKQESLHGH
SNNVSCVSVSKSGSYIASGEVTFLGFKAVIIIWDYAQRSIYAKLQLHKAKIEALAFSPND
KYLVSLGGQDDGRIVVWNIETKQAICGSAASPGMAGDCLTVQYSNTDDNVFVSAGSGTLR
VWELDRANCRIQPTECQTGRLKRIVKCVQISEDDQFIFCGTTSGDIMEINLKMGRLTNCG
PTEGKYSMGVNVLRILQCGDLLVGSGSGILTLCSGTNFKTLKXVPLEKGVTSLAIGGEGK
QFLVGTEAAQMYRFGCDFRKELISTSHNSAVKDGLICFGTSELFATCSDDIRLWHRDNER
LRIIVPNMTCNSLDIMLDGHSIISGWNDGKIRVFAPESGRLMLIIHDAHQRGVTAIAGTR
DCKRIVSGGGDGQVRIWELLPHGHRLVETMKAHTATINCIKIKSDSKQCVTASADGACII
WDLVRFLSLQMVMTNTRLRDVCYHPEEYQIITSGSDRKVAYWDVFDGTLIRELEGSKFGS
INGMHISQDGKHFVTGGDDKLVKVWDYMAGTVTHVGIAHGASITRVKICSNNRTIISTSA
DGAILRWRFPHPSPS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggaaacacacggagtgcctcaacttgagctagaggccgttattggatttaac
ggttacgtgtcttctggtctgagagtcgacccggactcagagcacctgatctaccctctg
ggctgctcggttattctgaagagaatcaaaggtggcaagcaggagagcttgcatgggcac
tccaacaacgtgtcctgtgtttcagtgtccaaaagtgggtcctatattgcctccggagag
gtcaccttcctgggcttcaaggctgtgattatcatctgggactacgcacagcgaagtatc
tacgccaagctgcaactccacaaggcgaagatagaagcactcgccttctcccccaacgac
aagtacctggtatccctcggcggtcaggacgatggcaggatagtggtgtggaatattgag
accaagcaggccatctgtggaagcgcggcttcacccgggatggccggggactgcctcact
gtgcagtactcaaacacagacgacaacgtctttgtttctgccgggagcggaacattgaga
gtctgggagctggaccgcgccaactgtagaatccagcccacagagtgtcagacagggagg
ctgaagaggattgtgaaatgtgtacagatctcagaggacgatcagtttattttctgtggc
accaccagtggagacataatggaaatcaacctcaagatggggcgcctgaccaactgtggt
ccaactgaaggaaaatacagcatgggtgtcaatgtcctcaggattctgcagtgtggggat
ctgctcgtgggttctggatccgggatcctcactctttgttccgggactaacttcaaaact
cttaagtgagtcccgctggaaaagggtgtcacctccctcgctattggaggagagggcaag
cagttcctcgtcgggacggaggccgcccagatgtaccgctttggttgtgactttcgaaag
gaactcatttccaccagccacaacagcgccgtgaaggacggactcatatgttttggaaca
tctgagttgtttgcaacctgctctgacgacatccggttgtggcacagagacaatgagcgg
ctgcgcatcatcgtgcccaacatgacctgcaactccctggacatcatgctcgacggacac
agcatcatcagcgggtggaacgacggcaagatccgcgtgttcgcgccggaaagcggccgg
ctcatgcttatcattcacgacgctcaccagaggggcgtgacagccatcgctggcaccagg
gactgcaagaggatcgtcagcggaggcggggatggacaggtccgcatttgggagctgctt
ccgcacggccaccggctagtggagaccatgaaagcgcacacagccaccatcaattgtatc
aagatcaagagtgacagcaaacagtgcgtcactgccagcgctgatggtgcctgcatcatc
tgggacctcgtgcggttcttgagtcttcaaatggtgatgaccaacacacggctccgagat
gtgtgctaccacccggaggagtaccagatcatcaccagcgggagtgacagaaaggtggcc
tactgggacgtgtttgatgggaccttaatcagagagctggagggctcgaagttcgggtcc
atcaacggcatgcacatctcgcaggacggcaagcactttgtgacaggcggagatgacaag
ctggtaaaggtgtgggactacatggcaggtacggtcacacacgtgggaatagctcacggt
gccagcatcaccagagtcaagatctgctccaataaccgcaccataatcagcaccagcgca
gacggagccatcctccggtggaggtttcctcatccttctccctcttaa
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