Gasterosteus aculeatus (three-spined stickleback): 120825471
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Entry
120825471 CDS
T07457
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120825471
Membrane trafficking [BR:
gat04131
]
Protein recycling
Others
Others
120825471
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
120825471
NCBI-ProteinID:
XP_040043025
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Position
IX:complement(2767790..2884037)
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AA seq
1237 aa
AA seq
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MESEVIFRPKWHSAFRLFIFMMFCSFRVAKAEITCRSCQPGNKWRSQELLLKFDTSEYPT
GLKREVYGDGAVRSAAAGAESRRLRCAAGSAECAPDIRVESAEQKLQRSAEKQDAGGSGG
GGGESKFAKTKVSNVQTSGEQKTRAGTTRCRRSSDEDHDDVQSREPGEDARPAGGRRRVT
RSDSRWRGAGPRQEEQKLNSSTFALTGDSSHNQAMVHWSGHNSSVILMLTKLFDFNLNSV
TESSLWRSTDYGATYQKLNDKVGSKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEG
ATYQKYRLSFYILSLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQVVHERVAPNRFYWSK
MGLDKEPGLIHLEASVSEGQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQV
STAGRPIYYVSAKRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNETYNLYVSD
TSGVYYTLALENVVSSMGHEGNVMVDLYEVAGIKGMFLANKKTDNQVKTHITYNRGRDWS
LLQAPSKDLKGNSIHCVLPYCSLHLHLHVSANPYTSGNIASRDTAPGIIVASGSIGSELT
SSNVSVFVASDAGNTWRQIFNEEYALLYLDQGGALVAIRHTPLPIRHLWLSFDEGRQWNK
YSFTNTPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEADYQTWH
LHNQGEPCLMGVKRIYRKLKPTSRCVMGKTYSVSMTSGPCDCTEADFECDYGYERRTNGK
CTPAFWFHPSTMSRSCTTGMTFLNSTGYRKVVSNNCTAGVSVQYKAKREQCPIQAPKGLH
LVTKEGTLTATLGTNITFLVFLEEGDGARTSITLDFGDGHALTYSNVSSIEDGIKHIYKA
VGIYRVTATGENSLGSESATLYLHVTCQLEYIHLSAPFVAVRNKEVNLTAVLWPSQVGTV
TYIWWIGNSTEQPVITLEGSVACTFPREGVSTVTVQVSAGNTILQDRKHIAVHEYFRSHL
LAFSSNLDDHNPDVAEWRLDVSRVIKNALIQATGVGEDQLLVTLLPGLPTAAEFFLLPDK
LLTEGKAEKSSARLDQLSEVLLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHS
GSAMLMLLSVAVVGLAVFVIYKFKRKIPGLNVYAQMQNEKEQEMMSPADPTEGTASSQRE
LVHSLEDLDSELNSRPRGCMKPHVHVKFSTELPTYVV
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgaggtcatatttcgcccaaagtggcacagtgcgtttaggcttttcattttt
atgatgttctgttcctttcgtgttgccaaagccgaaataacttgcaggtcgtgccaacct
ggaaataaatggcgttcacaggaattactgctgaaattcgacacaagtgagtacccgact
ggattaaagagagaagtttacggagacggggcggtgagatccgcggccgcgggtgcggaa
agtcggcgactccgttgcgctgctggttccgctgaatgcgctcctgacattcgggtggaa
tccgcggagcaaaagctgcaacggagcgcggagaagcaggacgcggggggcagcggtggc
ggcggcggcgagagcaagttcgcaaagacgaaagtttccaatgtccaaaccagtggcgag
cagaagaccagagccgggaccacccgctgcagaaggagcagtgacgaggaccacgacgat
gtccaaagcagagagcccggggaggacgcgcgccctgcgggcgggcggcgcagggtgacc
cgctctgactcgcgctggagaggcgccggtccgaggcaggaggagcagaaactcaacagt
tccaccttcgccctgaccggggactcctctcacaaccaggccatggtgcactggtccggc
cacaacagcagcgtgattttgatgctgaccaaactctttgacttcaacctcaacagtgtg
actgaaagttcattatggaggtcaactgactatggagcaacgtaccagaagctgaatgac
aaagtgggatcgaagacaatactcagctatttatacgtcagtcccaacaacaagagaaag
atcatgctgctgactgatccggaggtcgagagcagcctcctcatcagctctgatgaaggc
gctacctaccagaaataccggctgagcttctacatcctaagcctgctcttccaccccgag
caggaggactggattctggcctacagccacgaccaaaagctctacagctcggtggaattt
gggagaaggtggcaagtggtgcacgagagagtggcccccaaccgcttctactggtccaaa
atgggtttggataaggagccgggcttaattcacctggaagccagcgtttctgaaggacag
gcgctgtatgtcacctgcaagctacagaactgcaccgatgccaacaaggggaaaccgttc
cccggctacattgaccccaactctctggttgtgcaagatgagtatgtgtttgtccaggtg
tcaaccgccgggaggccgatctactatgtgtctgctaaaagggatgtctttacaccaatg
aagctgcccaagtacacactgcccaaggacctgcatgtgatcagtacggatgaaaaccga
gtggtagcagcggttcaggagtggaaccagaacgagacctacaacctgtacgtgtcggac
acatctggggtgtactatactctggctttggagaacgtggtcagcagcatgggccatgag
ggcaacgtcatggttgacctctacgaggtagcaggaataaaggggatgttcctcgccaac
aaaaagacggataaccaagtaaagacgcacatcacctacaacagaggcagagactggagt
ttgctgcaggcgccgagcaaagatctgaagggcaacagcattcactgcgtgctaccatac
tgttcactgcatctccatctccacgtgtctgcaaatccctacacatctggaaacatagcc
agccgggacaccgcaccggggatcattgtagcatcaggctccatcggctcagagctgaca
agcagcaacgtcagcgtcttcgtcgcctcggatgcaggaaacacatggagacagatcttt
aacgaggagtatgcattgttgtatctcgaccaaggaggagccttggttgcaataagacac
actccgcttcccatccgacacctgtggttgagctttgacgaaggacgccagtggaacaag
tacagcttcaccaacacacctctgtttgtagacggggtactgggagagcctggggaggag
actctaatcatgacgatattcggccatgtaagtcatcgctcagagtggcagctggtgaaa
atagacttcaggtccatcttcaataggaggtgtacggaggcggactatcagacgtggcat
ctacacaaccagggtgagccgtgcctcatgggagtgaaaagaatctaccgaaagctgaag
cctacgtccaggtgcgttatgggaaagacgtactctgtatcgatgacgtcgggcccctgt
gattgtacagaggctgattttgaatgtgattatggatacgagagaagaaccaacggaaag
tgcacccctgccttttggttccatccatcaacgatgtccaggagttgcaccacagggatg
acgttcctgaacagcaccggctacaggaaagtggtctctaataactgcacggctggagtc
agtgtgcagtacaaagccaaaagggagcagtgtcctatccaagcccccaaaggtctccac
ctggtcaccaaggagggaacgctgacagccacactgggcaccaacatcaccttcctggtc
tttctggaggagggcgacggggcgaggacaagcatcacgctggactttggagacggccac
gctctgacgtactccaatgtgagctccatcgaggacggaatcaaacacatctacaaggct
gtgggaatctaccgggtgactgcaaccggggagaacagcctcggctcagagagcgccacg
ctctacctgcacgtaacatgtcagctggagtacatccatctctcggccccctttgtggcc
gtgaggaataaggaagtgaacctgactgctgtcctgtggcccagccaagtgggaacagtc
acctacatctggtggatcggaaacagcacggagcagccagtaatcaccctagagggtagt
gtggcgtgcacgttcccccgggaaggtgtgagtacagtcactgtgcaggtgtctgcaggg
aatactattctgcaggacagaaaacacatcgccgtccatgaatatttccgctctcatctg
cttgccttttcatcaaacctggacgaccacaaccctgatgttgcagaatggaggctggat
gtgagccgagtcatcaagaacgctctgatccaggccacaggagtcggagaggaccagctt
ctggtcaccctcctcccaggtctccccacagcagccgagttctttcttctcccggacaag
ctgctaactgaggggaaagcggagaagagctctgctcgtttagatcagctctccgaggtt
ctgctcagcgccttaaatcaaaaccttgtccagttcacgttgcggccgggggtgcaagtc
accgtgtacgcagcacacttatcagcagcgcctctagtggacaccagcgagaaccacagt
ggctctgccatgctaatgctgctatcagtggccgttgtaggtttagctgtatttgtcatc
tacaaattcaagaggaagatcccaggcctcaacgtctatgcgcagatgcagaacgaaaaa
gaacaagaaatgatgagtccagctgatccaacagagggcacagccagctcacagcgggag
ttggtgcattctttggaggatctggactctgagttgaactcccggcccagagggtgtatg
aaacctcatgtacatgtgaaattctccacagaactccccacgtacgtcgtctaa
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