Gasterosteus aculeatus (three-spined stickleback): 120825482
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Entry
120825482 CDS
T07457
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03440
Homologous recombination
gat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120825482 (brca2)
03460 Fanconi anemia pathway
120825482 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120825482 (brca2)
03036 Chromosome and associated proteins [BR:
gat03036
]
120825482 (brca2)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120825482 (brca2)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
120825482 (brca2)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
120825482 (brca2)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
120825482 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
120825482 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
120825482
NCBI-ProteinID:
XP_040043049
UniProt:
A0AAQ4QN26
LinkDB
All DBs
Position
I:13775323..13787912
Genome browser
AA seq
2912 aa
AA seq
DB search
MDLPSENMFDTYKEEIWKELGPLDPDWFETLTSQMFTEDNVSDQEDLCGNQEANFKTPFD
KTAVDSQLLSTPKVFRHSRVVSPETEDERSFTEKEALPWTTTQSPYLLSTVGVRGAKYGG
FLPQSQDRFDLLLTPQKSPVTYDKQISESLGVQLHPDISWTSSLNTPSAVPSTLILSQNN
DSPCQVRSPEDKNVIIVRKLFPSLSNASRVGRVSPQKNDVTAFPQDAVSPEAGQNPEAHD
SPPGSLNQRDLDWKQTLPDAIEDGEIRRTVASVLEGAENVLSIFFTNSGSALRKVKTERI
KRKQMTPTVEDGCISPDVSSTTNAVSCEQRTADKEPGRPPSRPLVETVDGGITQWSPLSL
SDLPPCTLRTSFHDSGPVVQVENSVSPEQLQRDSASGRLVVRTPLKHTDTGFTKKKRKFV
YTVETPKLQVPGKDKQCQRMESSPAAPDPGREVNVKRSQAPDEADFHSPEMNKMPKQGNL
VDPTPRSPVRAKVHDPDLSQLRNDFVQDFSQMSDHCQLSKVQGDTPGTSFSPSACLSALK
RAKQKTTHANPRRDLDDRRPVSDAHGSPASFVLPSSEISGLQWADKTGTPPSRIIVNGKA
HSDDILQAAETDAMQSVGESQSLGPGRQRELHIESTSARRPSTAKEAVEGDNSDSRNGQA
RGNLPEKTAALLSVHPSGFQTASNRSIRITPSNLERAKRLFEEAEGEGTSRDQPVKCARD
SKDEMSARPESMKNPTTKSNQPLSSGEANKDTGCQLTASQKADVTELCTLLEQADTQFEF
TQFKTEKPETNCQADATSPLEVDNELDPAFLSGIDFDDSFSSEVEKHLTVAVVPDDEMIS
VSDGKTNRETSEVTSNSTGLLLSNTMKKGNHPFPEEASTSSKHFSAGGCRVTSAEAKHRD
GAGERSQLQNESPLMPAAGFKTAGGNVLRLSKESLTRARALFADFEGHPVASQTSPDKQS
SVHQPTGNLLHRRADASAFTDCGHGTEGGVRCSLSNTEGSLCSDEQVAGIRDDHSAKPLA
NSKMDATTRQSGFQAARGKETSLSAKAKRGAHAPFGDCDATDRNAGSPVKRVKSTGGSHV
PHEETRPKGEVQEPISEFENMNAGPAESHSVVVQRNEEMDNLGCTKTLVLTNAASLRGNT
CRQLEVSSPKSGGFQTASGKAVAVSSAALKKAKSLLSECVEVEDKVFVKPTHSKMPLPGL
TPRNSGFLAASGKQVAFSSEALQKARALFSDITSTAEIPAASEAKNANEARAENTEQTHC
AFTDTGSAKVHVSPRSPLEAKHLLTEFDGSISASAMQEADAFFKDCGVMDRDVGPSGEQE
QRKAPLCGRGGEKKDVTKRKEDQRLEINISVDLGSAHAAFEKVNMGLVEKHEKMLHPGDG
ENHSGAFGNTFDFSNIVALHANSSLRAKSLSPLVCTASMNRSSSGMKELSKGGGFCTASG
KNVSVSDDAMTKARSLLNENATFEDTGKQLKPKENTIPPQKGGFQTASGKAVAVSSAALK
KAKSLLSECVEVEDKVFVKQIHSKMPLPGLTPRNSGFLAASGKQVAFSSEALQKARALFS
DITSTAESTAASGAKNADEARAENTEQTHCAFTDTGSAKVHVSPRSTLEAKKALTDFAGV
ECHNSNSLSPHSLKSDLSKVKGVKITCIPSTSRDPCSAPESSMQKKDTDDEKKSHPNQSV
PRCIFIKEQEHSFSARDGKMTPPALGKLQGGAAEDVLDCEIKPASSRERSEVKRPQVSSV
VKFQSLNLSGCTETQQKLFAQEALDCTEALLEDESLFGQSLSMTLENAPLQENPKSSFRS
AEQRRRPEKRSIEEPEMPGQPPLKRRLLEEFDRTAAGPSSTLQPEKSCPNGVIKDRRIFK
YNVSLHPNITRPRTSGKNNVETSWQNTTPMQHSTPGESRAAHSKKPAFVPPFLANAKTER
CNNAMLKDNTRTPSAFVPPFKKQRAVVQESSFRPLVEEKEDKHHRLFNSNTCIAATKKKQ
CTTELAGSKSEEDSETVASADNKNDEKVINSNLPIGCGSEGTSAKTSLGEDLLSRCQDTF
QNLPNVELAQDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVTRIPLKAAVHGRPPARYTPQ
QLYRHGVHQHVCEISSETAESFRFNLKQFIKREALLDGGGVQLADGGWLIPSKDGTAGKE
EFYRALCDTPGVDPKLISDGWVDNHYRWVVWKQASMERSFPETMGGLCLTPEQVLLQLKY
RYDVEVDHSRRPALRRITERDDTAAKTLVLCVCGVVSRVQSPNRQSFDDSKTPRGADAGG
GNPSAVVWLTDGWYAIRAQLDEPLTAMLRNGRVAVGSKLIVHGAQLVGSQEACSPLEAPE
ALMLKICANSSRPVRWDAKLGFHKDPRPFLLPLSCLYSSGGQVGCVDMIVLRSYPIQWME
RKPEGGVVFRSVRAEEKEAKRFNGLKQKAMEILFAKIQDEFEKEDKGNDKPQRRRQAISR
QAIAGLQAGEELCEAVGEDPAHLEALLSEQQVETLNTYRRCVMEKKQAQLHDRFQRALES
AEASEGSCPKREVTPVWRLGVADSRDQRGRVYQLNLWRPSSDLQALLKEGRRYKVYNLTT
SDGKKHNGSSNVQLTGTKKTQFQDLQASREWLSTRFQPRVSACFVDLQNPEFQSLCGEVD
LTGFVIQIVDGQGFSPAFYLADGELNFVKVRCFSSFAQSGLEDLVKPRVLLSLSNLQLRG
QSASPTPVVYAGDLTVFSANPKDAHLQESLSQNKNLRQSQENFFLIAEETLSRLVQSDGR
RPLSSPALHTRTPALATSMIQDTTASGASQQLVRSRGTFTPVSRKPPAANCSTEKDAGSV
KRRRALNYLSHIPSPPPLLNLGSVASPCVNKTFNPPRRSGTPSTLKTVQTPAHKAQKVDS
LVEDEWVNDEELAMIDTQALRVGDLLQVHKTV
NT seq
8739 nt
NT seq
+upstream
nt +downstream
nt
atggatttaccttctgaaaacatgttcgatacttataaagaggagatctggaaagagctg
ggacccttggatcccgactggtttgagacactgacgtctcaaatgttcactgaggataat
gtctccgaccaagaagacctgtgtgggaaccaagaggcaaactttaaaacaccctttgac
aaaactgcagttgacagtcagctgttgtcaacccccaaagtgttcagacacagtcgagtt
gtgtcacctgaaactgaggatgagcggtcattcactgaaaaagaagctttgccatggacg
acaacccaaagtccgtacttgttgtcaacagtgggggtccgaggtgcaaaatatggaggt
ttccttcctcagagtcaggaccgttttgatctgcttcttaccccacaaaaatccccagtc
acctatgacaagcaaatatctgaaagtctcggagtacagcttcatcctgacatatcgtgg
accagttctctgaataccccgtcagctgttccatccaccctcattttgtctcaaaataat
gacagtccctgtcaagtgaggtctcctgaggacaaaaatgtcattattgttcggaagctt
ttcccctctctttctaatgcatccagagttggaagagtgtcaccccaaaaaaatgacgta
actgccttcccccaagatgctgtttcccctgaggcgggtcagaatccagaggcccatgac
tcccccccgggttcactgaaccagcgtgacctggattggaaacagacactaccagacgcc
atcgaggatggagaaattcgcagaaccgttgcgagcgttctcgagggagctgaaaatgtt
ctctccatatttttcaccaacagtggctcggcactgaggaaagtcaaaactgaacgaatc
aaaagaaagcaaatgactccgaccgtggaagatggctgcatctccccggacgtctcatca
accaccaatgctgtatcctgtgaacagagaacagctgataaggaacccggtagacccccc
tcacgcccactggtggaaactgtagatggtggaatcacccagtggtctccgttgagttta
tctgatctccctccttgtactctgcgtacttctttccacgatagtggtcccgttgtacaa
gtggaaaacagtgtttcaccagaacaactgcagcgtgactcggcctctggccggctggta
gtgaggacacctttgaaacacacagacacaggatttaccaagaaaaagagaaaatttgtg
tacactgttgagacccccaaactgcaagttccagggaaagacaagcagtgtcagaggatg
gagtcgtccccagcagctccagatcctgggcgagaagttaatgtgaagcggtcgcaagcc
ccagacgaagcagactttcacagccctgagatgaacaagatgccaaaacagggaaatctt
gtcgacccgactccacgttctcctgtgcgagcgaaagtccacgatcccgacctgtcgcag
ctccgcaacgattttgtacaagatttcagtcaaatgtctgaccactgtcaactgagtaaa
gtacaaggggatacacctggaaccagcttctctccatctgcttgtctgtcagcactgaag
cgagctaagcagaaaacgacgcatgcaaaccctcgccgtgacctcgatgacagaagacca
gtttctgacgctcatgggagtccggcatcatttgtccttcccagctcggagatcagtggt
ctgcagtgggccgataaaacagggacccctccctctagaatcatagtgaacggaaaagcc
cattctgatgatattttacaagcagcggaaacggatgccatgcagtcagtcggggagagt
cagtcactgggtccgggcagacagcgggagctgcacatagagagcacatcagcacgacga
cccagcactgcgaaagaagctgttgaaggcgataattccgactcacgtaacggtcaagct
cgtggcaatctgccagagaaaaccgctgctcttctttccgtccatccgtctggattccaa
accgcttcaaataggagtatacgcatcactccatccaacctggaaagagccaaacgtctc
tttgaagaggccgaaggggaaggaacttccagggaccagcccgtcaaatgtgcccgagac
tctaaagatgaaatgagcgcgagacccgagtcgatgaaaaatccaacgactaagtcaaac
cagccactttcttcgggtgaagcaaataaggacaccgggtgccagttgaccgcttcacag
aaggctgacgtgacggagctgtgcactctcctggaacaagcagacacccagtttgaattc
acccagtttaaaactgaaaagcccgaaacaaactgtcaggccgatgccacctctccacta
gaagttgacaacgagctcgacccggcctttctctccggtatagattttgatgacagtttt
agttcagaagttgaaaagcacctcacagtggctgtggtgcctgacgacgaaatgatctcc
gtttcagatggtaaaacaaaccgcgagacatctgaggtgacgagtaattccactggtttg
ttgctatcaaacacaatgaaaaaaggaaaccatccttttcctgaggaggcgtctacctct
tcaaagcacttctccgcaggcggctgtagggttacgtcagctgaagccaaacaccgggac
ggagctggtgaaaggagccagctgcagaacgagagtcctttaatgcctgctgcgggattt
aagacggcaggaggaaatgttttgagactttctaaagagtctctgaccagagctcgagct
ctgtttgccgattttgaggggcatcctgtggcgagtcaaacatcaccggacaagcaaagc
agcgtgcatcaacccaccggtaaccttctgcatcgtagagcggacgcttctgcgttcacg
gactgtggtcatggcactgaggggggggtgaggtgctctctttccaacacggagggctct
ctctgttcagatgaacaagtcgcaggcatcagagatgatcattctgcaaaacctttggcg
aacagcaagatggacgcaacaacgcgtcaaagcggcttccaggcggcccgtgggaaagag
acttccctctcagcaaaggcaaagcgaggggctcatgctcccttcggagactgcgacgct
accgaccgcaacgccggctcgccggtgaaacgcgtgaaaagcactggaggctcacacgtc
cctcatgaggaaacccgtccaaaaggtgaagttcaagagccaattagtgagtttgaaaac
atgaatgctggaccggctgagagccattcagtggttgtacaacgtaacgaggagatggac
aatctgggttgtacgaagacactggttttaacaaatgcggcttctctccgaggaaacacc
tgccgtcagcttgaagtttcatcgcccaaaagtggggggtttcagacagccagcggcaaa
gcagtagccgtttcatctgcagccctaaagaaagccaaatctctgttaagcgaatgtgtt
gaagtggaggacaaagtctttgtgaagccaacccactccaagatgccacttcctggtctg
acgccccggaatagtggatttcttgcagccagcgggaagcaagtggccttttcctctgag
gccctgcagaaggccagagctctcttcagcgacatcacttccactgcagagatcccagct
gcttcagaggcaaagaacgctaacgaggcgcgagccgaaaataccgagcaaacacattgt
gcttttacagatacaggcagcgcaaaagtccacgtgtcaccgagatccccgctggaagca
aaacaccttttgacagaattcgatggttctatttccgccagcgctatgcaagaagcggat
gctttcttcaaggactgtggcgtgatggatcgtgacgttggcccgtcaggagaacaagag
caaaggaaggcaccgctgtgcggaaggggcggcgagaagaaagacgttacaaaacgtaaa
gaagatcagaggttggaaatcaacatttctgtagatcttggaagcgcacacgctgcgttt
gaaaaggtgaacatgggactagttgaaaagcatgaaaagatgctacatcctggcgacggg
gagaaccacagtggcgcttttgggaatacgttcgatttttccaacattgttgctctacat
gcaaactcttctttgagggcaaagagcctttctccactggtgtgcacagcatcaatgaac
aggagttcctccggcatgaaggagttgagcaaaggtggtggattctgtacagccagcggg
aaaaacgtctccgtgtctgatgacgcaatgacaaaagcgaggtctcttttgaatgaaaat
gctacattcgaggacactggcaaacaactgaagccaaaagaaaacactattccaccacag
aagggggggtttcagacagccagcggcaaagcagtagccgtttcatctgcagccctaaag
aaagccaaatctctgctaagcgaatgtgttgaagtggaggacaaagtctttgtgaagcaa
atccactccaagatgccacttcctggtctgacgccccggaatagtggatttcttgcagcc
agcgggaagcaagtggccttttcctctgaggccctgcagaaggccagagctctcttcagc
gacatcacttccactgcagagagcacagctgcttcaggggcaaagaacgctgacgaggcg
cgagccgaaaataccgagcaaacacattgtgcttttacagatacaggcagcgcaaaagtc
cacgtgtcaccaagatccactctggaagcaaagaaagcattgacagattttgctggtgtt
gaatgtcataattcaaactcattaagcccacattcccttaaatcagatctatccaaagtg
aaaggtgtgaaaataacttgtattccctccacatccagggacccgtgtagtgcccctgaa
tcctctatgcaaaaaaaagacactgacgatgaaaaaaaaagtcatccaaatcaaagtgtc
cctcgttgcatttttatcaaagagcaggaacattcatttagtgccagagacggtaaaatg
accccaccagcattgggcaagcttcagggcggcgctgcagaggatgtgttggactgcgaa
ataaaaccggcaagcagcagggagagatctgaggtgaaaaggccacaggtgtcttcagtt
gttaagtttcagtctcttaacctaagtgggtgcactgaaacccagcagaagctgtttgcc
caggaagccctggactgcactgaagctttgttagaggacgaaagtctgtttggccaaagt
ctctcaatgactttagaaaacgcaccactgcaagaaaaccccaaatccagtttcagatct
gcagagcaacgacggaggccggagaaaaggtcaatagaggaaccggagatgcctggtcag
cctcccctgaaaagacgattactggaagaatttgacagaactgctgccggtccaagttca
acactccagcccgaaaaaagttgtccaaatggtgtaataaaagacagacggattttcaag
tacaacgtctctctccatccaaacatcacgaggccacgcaccagtgggaaaaacaatgtg
gaaaccagttggcaaaatacaaccccgatgcagcactccaccccgggagaaagcagagcg
gcacattccaagaagccagcgtttgttcctcctttcctggcaaatgcaaagacggagaga
tgcaacaacgcaatgctgaaggacaacacgagaacaccttccgcatttgttcctcctttc
aaaaaacagagagctgttgtccaagagagctccttcagaccactggtggaagagaaggag
gataagcatcatcgtcttttcaacagcaacacttgcatagcggccactaaaaaaaaacaa
tgcactacagaattagctggcagcaaaagcgaagaagacagtgaaaccgtggcctccgct
gacaataagaatgatgaaaaggtcattaattcaaacctccccattggctgtggatcagag
ggtacttctgcaaagacatcacttggggaggacttgttgtccagatgccaagacacattt
cagaatcttcccaatgttgagctggcgcaagatatgcaagacatgaggatcaggaaaaag
aagcggcagaccatccgacctttgccgggaagtttgtttctcaccaaaacctccggagtg
acaaggataccgttaaaggctgcagtccatggaaggcctcctgcaagatacactccgcaa
cagctctatagacatggagttcatcagcatgtgtgtgagatctccagtgagaccgccgaa
tcttttcgcttcaatttgaagcagttcatcaaacgggaagctttgctagacggaggaggt
gttcagctcgctgacggaggatggctgatccccagcaaagacgggaccgcagggaaagaa
gagttttatagagctctatgtgacactccgggcgtggatcccaaactgatcagtgacggt
tgggtggacaatcactaccgatgggtggtgtggaagcaggcgtccatggaaagatccttt
ccagaaacgatgggcggcctctgtctcacccccgagcaggttctcctgcagctaaagtac
aggtatgacgttgaggtggaccacagccgccggccggctctgaggaggatcacggaaagg
gacgacacagccgccaaaaccctggtcctgtgcgtctgcggggtcgtctccagagttcag
tcccccaacagacagagtttcgacgactcaaagacgccacgaggtgccgacgccggcgga
gggaatccatcggcagttgtctggctgacggacggatggtatgccattagagcccagctg
gatgaacccctgaccgccatgcttcgtaacggcagagtcgccgtcggcagcaaactgatc
gtccacggggctcagctggtgggatcgcaggaagcatgctcccctctggaggcacctgaa
gctctcatgttaaagatctgcgccaacagcagcagacccgttcgatgggatgcgaaactg
gggttccacaaggatccgaggcccttcctgcttccgctctcttgtttgtacagcagtgga
ggacaagtgggatgtgtggacatgatcgtactgagaagctaccctatccagtggatggag
aggaaaccggaaggaggcgttgtcttccgatcggttcgcgccgaagagaaagaggcgaag
cgattcaacggcctcaaacaaaaggctatggagatcctattcgcaaagattcaagatgaa
tttgaaaaggaggacaaaggtaatgacaaacctcaacgcaggaggcaggcgatcagtcgt
caggctattgcaggtcttcaagctggagaggagctctgtgaagccgtgggggaagaccca
gctcacctcgaggctctcctgagtgagcagcaggtggagaccctgaacacgtacaggcgt
tgtgtgatggagaagaagcaggcgcagctgcacgatcgcttccaacgagctctagaaagt
gcagaggccagcgaagggagctgtcccaagcgagaggtcacacctgtgtggaggctcggt
gtcgctgactccagggaccaacgcggcagggtttaccagctgaacctttggcgaccctcc
tcggatctccaggctttactgaaggaaggccgtcgatacaaagtctataatctcaccact
tccgatggaaagaaacacaacggcagctcaaatgttcagctgactgggacaaagaaaacc
cagtttcaggaccttcaggcttctcgggaatggttatcaacccgttttcaaccgagggtc
tctgcctgctttgtggaccttcaaaacccagaattccagtcgctgtgtggagaagttgat
ctcacaggatttgtgatccaaatagtggatggacagggtttctctcctgcattttatttg
gccgatggggaactcaactttgtcaaagttcgctgtttcagcagctttgctcagtccggc
ttggaggatttggtaaaaccacgtgtgctgttgtctctgagcaacctgcagctgagaggc
cagtcagcatcgcccactccggttgtgtacgccggggatctgaccgtcttctcagcaaac
cccaaggacgctcacctgcaggaatcactcagccaaaacaaaaacctacgtcagagtcag
gaaaacttctttttaattgctgaagagacactttcacgtttagtccaatctgacgggcgg
aggcccctctcttctccggcgctgcacacacgaaccccagcgcttgctacgtccatgata
caagacacaacagcaagtggggcttctcagcagcttgtcagaagccgcggtaccttcaca
cccgtcagcaggaaacctcccgcagcaaactgttcaacagagaaagacgccggcagcgtg
aagcggaggagagctttgaactacctgtctcacataccgtctcctccgccactcctcaat
ctgggctcggtggcttccccatgtgtaaataagacattcaacccccctcgcaggtccggg
acaccaagcactttaaaaactgtacagactccagctcacaaagctcaaaaagtcgattca
ctggtggaggatgaatgggtgaacgacgaggaactggccatgatcgatactcaggcgttg
cgggttggtgatttactgcaggtacataagactgtatga
DBGET
integrated database retrieval system
