Gasterosteus aculeatus (three-spined stickleback): 120825637
Help
Entry
120825637 CDS
T07457
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00310
Lysine degradation
gat00514
Other types of O-glycan biosynthesis
gat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120825637
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120825637
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gat01003
]
120825637
Enzymes [BR:
gat01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120825637
Glycosyltransferases [BR:
gat01003
]
O-Glycan biosynthesis
O-linked Gal type
120825637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
MT-A70
Motif
Other DBs
NCBI-GeneID:
120825637
NCBI-ProteinID:
XP_040043294
LinkDB
All DBs
Position
IX:complement(7730039..7740424)
Genome browser
AA seq
609 aa
AA seq
DB search
MPRAASLLPALLVLLLPGPGRGYFPEERWSPESPLLAPRVVLAVVCRNSAHSLPLFLGAI
ERLDYPKDRVALWVATDHNIDNTTAILRDWLIKVQNDYHYVEWRPQEEPRAFEDEPGPKH
WSNLRYEHVMKLRQAALESAREMWADYLLVADCDNLLTNTDTLWKLMSENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYMPIRKQEQRGCFAVPMVHSTYLVDLQKEASRQLAFYP
PHPEYSWALDDVIVFAYSARMADVQMYVCNKETYGYFPVPVRSHATLQDEVESFVHTQLE
IMVKNPPLEPSSLLSLPPKQPNKIGFDEVFMINLVRRSDRRERMLRSLYEQELSCKVVAA
VDGKALNKTDIESMRIKMLPGYKDPYHSRPLTKGELGCFLSHYNIWKEIADRGLQTSLVI
EDDLRFEVFFKRRLQTLLQEVTKHKLDWDLIYIGRKRMQVDHQEKSVPNIHNIVEADYSY
WTLGYLLSLQGAQKLLRAEPLSKLLPVDEFLPVMYNKHPVSEYMGHFEVRDLRAFSAEPL
LVYPTHYTGDQGYISDTETSVVWDNEALKTDWDRAKSRKTQEQGELSFEAQNSDVLQSEL
ENWSARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccccgggccgcctctcttctgcctgccctgctagtcttgctcctgccgggcccgggt
cgtggatatttcccggaggagcgctggagccccgagtctccgctcctcgctccccgggtc
gtcctcgcggtggtgtgccgcaactcggcgcactccctgccgctgttcctcggagccatc
gagcgcctcgactacccgaaggaccgcgttgcgctgtgggtggcgacagaccacaacata
gacaacacaacagccatcctgagggactggcttatcaaggtgcagaatgactatcactac
gtggagtggagacctcaagaggaacccagggcctttgaagacgagccggggcctaagcac
tggagtaatctccgctatgaacacgtaatgaagctgcgtcaggccgctctggagagcgcc
cgtgagatgtgggccgactacctgctggtggccgactgcgacaaccttctcaccaacacc
gacacgttgtggaaactgatgagtgaaaacaagaccattgtcgcgccgatgctggagtcc
agagcggcgtactctaacttctggtgcggcatgacttcacagggttactacaaacgcaca
ccagcctacatgcctatccgtaagcaggagcaacggggctgcttcgccgtgccgatggtg
cactccacctacctggtggacctacagaaagaggcctcccgtcagctggctttttatcca
cctcacccagagtacagctgggccctggatgatgtcatcgtctttgcctactccgctcgg
atggcagatgtgcagatgtatgtgtgcaacaaagagacttatgggtatttcccagtgcca
gtgcgttcccacgccaccctgcaggacgaggtggagagcttcgtgcatactcagcttgag
atcatggtgaaaaatcctccattggagccctccagcctcctgtctctccctcccaagcag
ccgaacaagatcggctttgatgaggtgttcatgataaatctggtgcggagatctgaccgt
cgcgagcgaatgctgaggagcttgtatgagcaagagctcagttgtaaggtcgttgctgct
gtggatggcaaagctctgaacaagactgatatagagtcaatgaggattaagatgctgccg
ggttacaaagacccttatcatagtcggcccctcaccaaaggtgaactgggttgtttcctc
tctcattacaacatctggaaggagatagccgatcgtggtctgcagacctccctggtcatc
gaggatgacctgcgcttcgaggtgttcttcaagcgacgtctccagacgctgctgcaggag
gtgacgaagcacaagctggactgggatctcatttacattgggcggaagcggatgcaggtg
gaccaccaggagaagtcggtaccaaacatccacaatatcgtggaggcggactactcctac
tggacactaggctacctgctgtctttacaaggagcccagaagctcctccgggcagaaccc
ctcagcaagttgcttcctgtggatgagttcctccctgtcatgtacaacaagcatccagtt
tcggagtacatgggccactttgaggttcgggacctgcgtgccttttcggccgagccgctt
ctggtgtacccgacccattacaccggagaccagggctacatcagtgacacggaaacatcg
gtggtctgggacaacgaggccctcaaaacggactgggaccgggccaagtcgaggaaaact
caagagcagggggagctgagcttcgaggctcagaactctgacgtgctgcagtctgagctg
gagaactggagcgcgcgggacgagctgtaa
DBGET
integrated database retrieval system
