Gasterosteus aculeatus (three-spined stickleback): 120825793
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Entry
120825793 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: transcription activator BRG1-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120825793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120825793
03036 Chromosome and associated proteins [BR:
gat03036
]
120825793
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120825793
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120825793
Chromatin remodeling factors
BAF complex
120825793
PBAF complex
120825793
GBAF(ncBAF) complex
120825793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
120825793
NCBI-ProteinID:
XP_040043556
LinkDB
All DBs
Position
9:913920..928611
Genome browser
AA seq
1657 aa
AA seq
DB search
MATPDPPMGGTPRPGPSPGRGPSPGAMLGPGSGPSPGSSHSMMGPGPPTSGHPQPGPSGY
GQDSMHPLHKSMESLHEKSLGEEGRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHSPL
GGSDHSSPVPSNGPPSGPLLPSSSSSGGPGLASAPLDGPGGDPHTLGANNRPGPPGSSGP
GPGLGPAVSGLVSALEPGGSPCPGGLAGPIPFNQNQLHQLRAQIMAYKMLARGQPLPDHL
QMAVQGKRPMPGMQQQPMPSLAPGGGAMGLPGGPGPAPMGSGYSRVHGMMGPNMPPPGPS
GAAGMQGQNPNGPPKSWPEGSMVNAAAPSNAPQKLVPAQPAGRPSPAPPSVPPAASPVIP
PQTQSPGQPAQPTPMMPYHGKQNRITPIQKPCGLDPVEILQEREFRLQARITHRIAELEN
LPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTTLETALDAKAYKRSKRQSL
REARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITGRMQKVTKAVATY
HANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTEL
VRAHKAVQALKEKKKKKKKKKRKLEIAEAQTAAVGPDGEPLDETSQMSDLPVKVIHVDSG
NILTGPDAPKAGQLDAWLEMNPGYEVAPRSDSEDSEEEEEDEEEEEEEPQPSATQVEEKK
KIADPDSEDVSEVDVQHIIENAKQDVDDEYSGAAFARGLQSYYSVAHAVTEKVEKQSSLL
VNGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPSLII
VPLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKQV
LAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLL
PTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLP
EKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHP
YMFQQIEESFSEHLGFSGGIVQGLDLYRASGKFEVLDRILPKLRATNHKVLLFCQMTTLM
TIMEDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSAD
TVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI
QAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVCLRINEEDEVPDDETVNQMIARSEE
EFEQFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEEEEEKMFGRGS
RQRKEVDYSDSLTEKQWLKAIEEGTLDEIEDEVRHKKTTRKRKRDRDLDVPGPSSSSGGR
GRGDKDEDGKRQRKRGRPPAEKVSPNPLTVTKKMRKIVDAVIKYKDSASGRQLSEVFIQL
PSRKELPEYYELIRKPVDFRKIKERIRGHRYRTLGDLERDVMLLFQNAQTFNLEGSLIYE
DSIVLQSVFTSLRQKVEKEDESDGEESEEEELEEGSESESRSVKMKIRLGKKDKGGDRGK
GRSRRTGRSRAKPVVSDDDSEEEQEEERSLDATDDES
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaccagacccccccatgggaggcactcctcgccctggtccttcccctggtcgg
ggtccctcaccgggggcaatgctgggccccggctccgggccctccccgggctcctctcac
agtatgatgggccctggcccccccacatctggacacccccaaccagggccctctggatac
ggccaggacagcatgcaccctctgcacaaatccatggagagcctgcacgagaagagcctg
ggcgaggagggccgcttcagtcagatgaagggactgtctatgagacagggcgggcacagc
ggcatggggcccccacccagccctctggatcaacactcgcaaggttaccactctcctttg
ggtgggtctgaccactccagccccgtcccttcaaatggccccccctctggccctcttctg
ccatcctcctcctcttctggtggtcccggcttggcctctgcaccattagacggtcccggt
ggggatccacacaccctgggtgccaacaaccggcctggacctccgggtagctctggcccc
ggacccggcttgggccccgctgtctctggcctagtttctgcccttgagcctggtggcagt
ccgtgccctggaggtcttgcgggccctattccattcaaccagaaccagcttcaccaactc
agggcccagatcatggcttataagatgctggcccgggggcagccgctgccagaccacctg
cagatggccgtccaagggaagaggccgatgcccgggatgcagcagcagcccatgcccagc
ctggctcctggggggggggcgatgggtctgccaggaggaccaggaccagcgccgatgggc
tcaggctacagtcgagttcatggaatgatgggtcccaacatgcctcctccaggcccatcg
ggtgcggccgggatgcagggacaaaacccaaacggacccccgaagtcctggccggaaggg
tccatggtgaacgcagcagccccctccaacgcaccccaaaagcttgtccccgctcagccg
gctggtcggccctctcccgccccgccctcagttccccccgctgcctccccagtgataccg
ccccagactcagtcccccggccagccagcacagcccactcccatgatgccttaccacggc
aagcagaaccgcattacccccatccagaagccctgcggcctggacccggtggagatactg
caggagagggagttcaggctgcaggcgcgtatcactcatcgcattgcggagctggagaac
ctgccgggctctctggccggtgatctccgtaccaaagccaccatagagctcaaagccctc
cggctgctgaacttccagagacagctgcgtcaggaggtggtggtgtgcatgcgtcgcgac
accactctggagaccgccctcgatgccaaggcctacaagcgaagcaagcggcagtccttg
cgagaggcgcgcatcacggagaaactggagaaacagcagaagatcgagcaagagcgcaag
cgccggcagaaacatcaggagtacctcaacagcatcctgcagcacgccaaagacttcaaa
gagtaccaccgctcaatcacaggccgaatgcagaaagtgaccaaagcggtggccacctac
cacgccaacaccgagcgcgagcagaagaaagagaacgagcgcatcgagaaagagcggatg
aggaggctcatggctgaggacgaggagggttatcgcaaactgattgaccagaagaaggac
aagcgtctggcctacctgctgcagcaaaccgacgagtacgtggccaacctcaccgagctg
gtgcgagctcacaaggcggtgcaggccctcaaggagaagaagaagaagaagaagaagaaa
aagaggaagttggagatcgccgaggctcagaccgccgccgtgggtcctgatggagagcct
ctggacgagaccagtcagatgagtgacctgcctgtgaaggtcatccacgtggacagcggg
aacatcctgacgggaccggacgctcccaaagccggacagctggacgcctggctggagatg
aaccccggttatgaggtggctccccgctcagacagtgaggacagcgaggaggaggaggaa
gacgaggaggaggaagaggaggagcctcagccatcagccactcaggtggaggagaagaag
aagattgcagaccctgacagcgaagatgtgtccgaggtggacgtccagcacataatcgag
aacgctaagcaggatgtggatgacgaatacagcggcgcagctttcgcccgaggcctccag
tcgtattactctgtggctcacgccgtgacggagaaggtggagaaacagtccagtttgtta
gtgaacggacaactcaaacagtatcagattaaaggtctggagtggctggtttccctctac
aacaacaacctgaatgggatcctggcggacgagatgggtttgggaaaaaccatccagacc
atcgccctgatcacgtacctcatggagcacaagcgactcaacgggccgtccctcatcatt
gtgcccctctcaaccctgtctaactgggtgtatgagttcgacaagtgggcaccgacggtg
gtgaaagtgtcctacaaggggtctccggctgcccgacgagccttcgtcccccagcttcgc
agcggcaagttcaacgtcttactcaccacctacgagtacatcatcaaggacaaacaagta
ctggccaagattcgttggaagtacatgatcgtggacgagggccaccgcatgaagaaccac
cactgcaagctgacccaggtgctgaacacccactacctggccccgcggcgggtgctgctg
accggcacgccgctgcagaacaagctgcccgagctctgggccttgctgaacttcctcctg
ccgaccatcttcaagagctgcagcaccttcgagcagtggttcaacgccccgttcgccatg
acgggggaaaaggtggacctcaacgaagaggagaccatcttgatcattcgccgtctccac
aaagtgcttcggcccttcctgctgcgcagactgaagaaggaggtggaggctcagctccca
gagaaggtggagtacgtgatcaagtgcgacatgtcgtctcttcagagggtgctgtacaga
cacatgcaggccaagggcgtcctgctcactgacggatcagagaaggacaagaagggtaaa
ggaggcacaaagaccctgatgaacaccatcatgcagctgaggaagatctgtaaccacccg
tacatgttccagcaaatagaggagtctttctctgaacatttaggattctctggtgggata
gttcagggcctcgacctgtaccgggcatcggggaagttcgaggtgctggatcgaatcctg
ccgaagctgcgggccacaaaccacaaagtgctgctcttctgtcagatgaccacgctcatg
accatcatggaggactactttgcctatcgcagcttcaagtatctgcgcctggatggcacc
acgaaagctgaggatcgagggatgttgctgaagacattcaatgaaccgggatcagagtac
ttcatcttcctcctgagcaccagagctggaggcctgggcctcaatttgcagtctgctgac
actgtggttatttttgactctgactggaacccacatcaggacctgcaggcgcaggacaga
gcccaccgcatcggccagcagaacgaggtgcgcgtgctgcgcctgtgcacggtcaacagc
gtcgaggagaagatcctggccgctgccaagtacaaactgaacgtggaccaaaaggtcatt
caggccggcatgttcgaccagaagtcctccagccacgagcgcagggccttcctgcaggcc
atcctggaacacgaggagcaggacgaggtctggggtcaggaagtgtgccttcgcattaat
gaggaggacgaggtgccagacgacgagacggtcaaccagatgatcgccaggagcgaggag
gagtttgagcagttcatgcgcatggacctggaccgccgtcgcgaggaggcccgtaaccct
cggcgaaaacctcgcctgatggaggaggacgagctgcccacctggatcatgaaggacgac
gccgaggtggaacggctgacctgcgaggaggaggaggagaaaatgtttggacgtggatct
cggcagcggaaggaggtggactacagcgactcgctgacggagaagcagtggctgaaggcg
atagaggagggaacgctggacgagatcgaggacgaggtgcgtcacaagaagacgacgcgg
aagagaaagcgggaccgcgacctggatgtccccggcccctcctcttcctcggggggacga
ggccgaggggacaaggacgaggacgggaagaggcagaggaagagggggcggccgcctgct
gagaaagtctcccccaaccccctcacagtcacaaagaagatgaggaagatcgtggacgcc
gtcatcaagtataaagacagcgccagcgggcgtcagctgagcgaggttttcatccagctg
ccgtctcgaaaggagctcccggagtactacgaactgatccgcaagccggtggacttcagg
aagatcaaggagaggattcggggtcatcgctaccgcactctgggcgatctggagagagac
gtcatgctgctcttccaaaacgctcagaccttcaacctggagggatcgctgatatatgaa
gactccatagtcctccaatcggtgtttaccagtttgaggcaaaaggtggagaaggaggac
gaaagtgatggcgaggagagcgaggaagaggagctggaggaaggatcggagtctgaatct
cgctcggtgaaaatgaagatccgtctgggaaagaaggacaaaggtggagaccgagggaag
ggacgcagcaggcggacaggacgcagccgagccaaacctgtagtcagtgatgacgactcc
gaggaggagcaggaagaggagcgctccctcgacgccaccgacgacgagtcctga
DBGET
integrated database retrieval system
