Gasterosteus aculeatus (three-spined stickleback): 120825865
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Entry
120825865 CDS
T07457
Symbol
arhgef38
Name
(RefSeq) rho guanine nucleotide exchange factor 38 isoform X1
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120825865 (arhgef38)
Membrane trafficking [BR:
gat04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120825865 (arhgef38)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
BAR
SH3_9
SH3_1
DUF4653
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
120825865
NCBI-ProteinID:
XP_040043644
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All DBs
Position
IX:13995131..14006093
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AA seq
813 aa
AA seq
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MDPNEASGGEKEKEKVIKRRNRPVFLRYLERRKTDTIVAEDSVKWDINLGTLVRRSQSDK
TEYSAKLKEKMTPQERSTPPSPALDPEEVRSRKMKRRAMVIQELVQTERDFLTDLELCIR
EVVQPLRNLQVVDVDTLFTNTETVCEVSAALLHRLNGAIADPDPEAVVIGDIFIQAKGAL
EDVYKIYCYHHDDANMSLKSYEKEEEIKQHFTTCILSLKKIYDLEGKPNLLDMGSLIIKP
VQRIMKYPLLLGELWHATPEDHPDYHPLQKAFTAAKIINVNINEFKRRKDIVMKYKRLED
EGTLRGKLHKFNIHSIRKKGDRFAGYLKILTGVEPQVRDEIFDREEKLFRSLEKAVRQLA
KNVQCYLQHTQEMVSVAVQNVQDMEDILKDPNKNLTNGSSDTNGNDPYKHFKDSMARLVL
APLSSLQGMFTAPQKLIQKRYDKLLDYCSRLERSSSFSSSSTSSSSNSSSPSPVSEDPPG
PARRDYEALNALLVEELQRFNAAAYSILTNCVVYLVALLRGLMDKILLRSPSIQQLPAPL
SNIAEVQNSIMEELNNLTFVKDNAQKLMERKVSFERQRDKRIALPEVQHQTEEQRAWLLA
EYPVSRLYQLKRKCNGCQEQDLALLEGELIALLEDTDPSGSSSRWLVHTGGAQGYVYSTF
LKQYNPLRDSQRGGRRPKDQQQQQQQQQPQQPPAAMADEDFDDISLFVSGSGSSSLRSFN
LNTTDSGSTLSGLQGEPEGPEGPEDPEDTEAQQFYAVYAFQARCDQELTLQEYQHVRILQ
FHDLGGNKDWWLAEANGQKGYVPANYLGKMSYA
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaatgaggccagcgggggtgagaaggaaaaggagaaagtgataaagaggagg
aaccggcccgtgttcctgcgttacctggagaggaggaagacggacactattgtggccgaa
gactcggtcaaatgggacatcaacctcgggacgctggtgaggaggagtcagtccgacaag
acggaatacagcgctaaacttaaagagaaaatgacaccacaggagcggtccactcccccg
tctccggcactggacccggaggaggtccggtccaggaagatgaagcgcagagcgatggtc
attcaggagctagtgcagacggagagggatttcctcacagacctggagctgtgcatcaga
gaggtggtccagcctcttcgcaatctgcaggttgtggatgtagacacgttgttcaccaac
acagagacggtgtgtgaggtttctgcagcgctgctccacagactgaacggggccatagcc
gaccctgatccggaggccgtcgtcataggagatatattcatccaggcgaagggagcatta
gaagatgtatataagatatactgttaccatcacgatgatgccaacatgtcactcaaatcc
tatgagaaagaggaagaaataaagcaacatttcaccacatgtatattatctctgaagaaa
atctacgacctagaagggaaacccaacctgctggacatgggttccctaatcatcaaaccg
gtccagaggatcatgaagtacccgctgctgctcggggagctgtggcacgccacgcccgaa
gaccaccctgactaccacccgctgcagaaggcgttcacggccgctaagatcatcaacgtt
aacatcaacgagttcaagagacgcaaagatatagtcatgaagtataagcggttggaggac
gagggcacactgaggggcaaactgcacaagttcaacatccactctatccggaagaaaggc
gacaggtttgccggatatctcaaaatcctcactggagtcgaaccacaggtgagagatgaa
atatttgatcgagaggagaagctgttccggagtctggagaaggctgtgaggcagctggcc
aagaacgttcaatgttacctgcagcacacccaggagatggtgtctgtagctgttcagaat
gtccaggacatggaggacatcctcaaggatccaaacaaaaacctcacgaatggctcttca
gacactaatggaaatgatccctacaagcactttaaagacagtatggcgcgcctggtcctc
gcccccctctcatcgctgcaaggcatgttcacagccccacagaagctcatccagaagcgt
tacgataagctgctggattactgcagccgactggagcgctcttcttctttttcctcctca
tccacgtcatcatcctccaactcttcctcgccctcaccggtgtcagaagacccaccgggt
cccgccaggagggactatgaagccctcaatgccttgctagtggaggagctgcagaggttc
aacgcggccgcctacagtatcctgacgaactgcgtggtgtatctcgtggccctgctaagg
gggctgatggataaaatacttctccgttccccgtccattcagcagctaccagctccgctg
tccaacattgctgaagtgcagaacagcatcatggaagagctgaacaacctgacctttgtg
aaggacaacgcacagaagttgatggagcgaaaagtcagcttcgagagacaacgagacaag
agaatagcactgccggaggtgcagcatcagaccgaggagcagcgagcctggctgctggca
gaatacccggtgagccgcctgtaccagctgaagaggaagtgcaacggctgccaggagcag
gacctcgccctcctggagggggagctgatcgccctgctggaggacacagacccatcgggc
agcagcagccgctggctggttcacaccggaggtgcccaaggttacgtctactccacattc
ctgaagcagtacaaccctctgagggactcccagcgggggggccggaggccgaaagatcag
cagcagcagcagcagcagcagcagccacagcagccgccggctgccatggcggacgaggac
tttgacgacatcagcctgtttgtgtcgggcagcggcagcagcagcctgcgcagcttcaac
ctcaacaccaccgacagcggctcgaccctgtccgggctgcagggcgagcccgagggcccc
gagggccccgaagacccggaggacacggaggctcagcagttctatgctgtgtatgcattt
caagcacgctgtgaccaggagctgaccctgcaggagtaccagcacgtccgcatccttcag
ttccatgacctcggaggcaataaggactggtggttagcggaggctaacggacagaaggga
tacgtcccggccaactacctgggcaagatgtcctacgcataa
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