Gasterosteus aculeatus (three-spined stickleback): 120825958
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Entry
120825958 CDS
T07457
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03250
Viral life cycle - HIV-1
gat03272
Virion - Hepatitis viruses
gat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120825958
03272 Virion - Hepatitis viruses
120825958
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120825958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120825958
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120825958
Membrane trafficking [BR:
gat04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
120825958
Exosome [BR:
gat04147
]
Exosomal proteins
Proteins found in most exosomes
120825958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
DUF2226
Snapin_Pallidin
COG3_N
Motif
Other DBs
NCBI-GeneID:
120825958
NCBI-ProteinID:
XP_040043765
LinkDB
All DBs
Position
X:10131169..10143331
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AA seq
902 aa
AA seq
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MATFISVPLKKSSEVELVKPLSKFITATYPAGEEQGEYIRAVEELNKLRKNALGRPLDKH
ESSLEIVLRYYDQLCAVEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNAAALASQIAAEQNLDNDEGLKNAAKFYQLASGAFGHIKDTVLTALNREPTMDISP
ETVGTLKLIMLAQAQEVFFLKATSDRMKDAVIAKLANQAADFYGEACKQCQYKDNLPKYF
YFQEVLSVLAAKHTIMQANAELHQSVVSKQKKHFGEEIARLQRSAELVKTVASGYDEYVS
VKDLSEKINRALTAAKKDNDFIYHDRVPEVKDLEQIGKAALVKATTITPPLSQKFADLFE
KMVPMVVQQSMSIYSQRKAETVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQS
IAEKARAVVQLGGLQSIEQLIRDLPELLTRNREILDESLKMLDDEETTDNELRTKFNQRW
NRTPSGDLYKSLRTEGAKYGGVLDQAVQADQVVRDRYTTHCDMIALLCKPENELNAAIPS
ANPTKTLQGSEVVNVLRSQLAQLDAMKKERETVEEEVKAVTFDMSTSFLTALSQDGAINE
EQLSLSKLDQLYGAYNQRVQATLRTQEELLGQVQTSHQEFSSLKQSNTEANQREEVLKKL
ASAHDSYVEISNNLREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPSFNVPAYQSTPAAPAGVPTPAPRTVFQPQQPQAKTQPPARPPPPCVTPQAASTPPV
NAPITGPPNSNPPPVAPPTQAQGPPYPSYQGYPGYFQMPGYNPYAYGQYNMPNMPNMPSM
PNMPSMPNMPSMPNMPNMPNMPYIPYQQTPGQGGYPAAPPPGQPYHGYPQQPPQQQPYYP
QQ
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtttatttcagtgccgttgaaaaagtcctccgaggtggagctggtgaagccg
ctttctaaattcataaccgctacgtacccagcgggcgaggagcagggggagtacatccgt
gccgtggaggagttgaacaagctccgtaagaacgcgctgggaaggccgctggacaaacac
gagagctccctggagatcgtgctcagatactacgaccaactgtgtgcagtcgagcccaag
tttcccttctctgaaaaccagctctgcttgaccttcacctggaaggacgccttcgataaa
ggatctctgtttggtggctcagtcaagctcgctttggccagtttgggctacgagaagact
tgtgtgttgttcaatgcagccgcattggccagtcagatcgccgccgagcagaacctggat
aacgatgagggactgaagaatgcagccaaattctatcagctggccagcggggcgttcggt
cacatcaaggacaccgtgctgacggcgctcaacagggagcccaccatggacatctctccc
gagacggtgggaaccctgaagctcatcatgctggcccaggcccaggaggtcttcttcctc
aaagccacctcagacaggatgaaagacgctgtcatcgccaagctggccaatcaggcagcc
gatttctacggcgaagcctgcaagcagtgccagtacaaagacaaccttcccaagtatttt
tattttcaggaagtgctgtcggtgctggcggccaagcacaccatcatgcaagccaacgct
gagctgcaccagagcgtcgtgtccaagcagaagaagcacttcggggaggagatcgctcgc
ctgcagcgctccgcggagctggtgaagacagtggcgtccggttacgacgagtacgtgagc
gtcaaggatctgagcgagaagatcaaccgagccctcaccgcggccaaaaaagacaacgac
ttcatctaccacgaccgcgtgcctgaggtcaaggatctggaacaaatcggcaaggcagcg
ctcgtcaaggccaccaccatcacgcctccactcagccagaaattcgcagacttgtttgag
aagatggtgcccatggtggtgcagcagtccatgagcatttactcccagaggaaggctgag
actgtaaacagactggtgggaacaatgagggaggcgaccaatctctgcaacggggtgttg
gcgtccctcaacctgccggccgctctggaggacctgtcaggagattctatcccacaatcc
attgctgagaaggcccgggccgtcgtgcagctgggtggactgcagagcattgagcagctg
atcagagacctgcctgagctcctgacccgcaaccgagagatcctggatgagtctctgaag
atgctggacgacgaagagacgacggacaacgagctgagaaccaagttcaaccagcgttgg
aacagaaccccctctggagacctctacaagtccctgcgcacagagggagctaaatatggc
ggcgtcctggaccaggccgttcaagcggaccaggtggtgagggaccgctacaccacccac
tgtgacatgatcgccctgctgtgtaaaccggagaacgagctcaacgccgccatcccctcc
gccaacccgaccaagaccctgcagggcagcgaggtggtgaacgtgctgcgctcccagctc
gcccagctggacgcgatgaagaaggaaagggagacggtggaggaagaggtcaaggccgtg
accttcgacatgtctaccagctttctgacggcgctctcccaggatggagccatcaatgag
gagcagctgtcactctccaagctcgaccagttgtacggcgcctacaaccagcgggtacag
gccaccctgcgcacgcaggaggagctgctgggacaagtccagacgtcccaccaggagttc
agcagtctgaagcagtccaacacagaagccaaccagagggaggaggtcctgaagaagctg
gcttcagcccacgacagctacgtcgagatcagcaacaacctgcgcgaaggcaccaagttc
tacaacgacttgacggaaatcttgctcaagttccagaacaaatgcagcgacattgttttt
gctcgcaaaaccgagcgggatgaactacttaaggacctgcagcagagcatcgcccgggag
cccagcgctccatccttcaacgttcctgcctatcagagcacccctgctgctcctgccggg
gtcccaacccccgcacccaggaccgtctttcaacctcaacagccccaggccaagacccag
cccccagccaggcctcctcccccgtgcgtcacccctcaagcggcctccacccctcccgtc
aatgcgccaataaccggccctcccaacagcaacccaccacctgtggccccgccaacccag
gcccagggcccgccttaccccagctaccagggctatccagggtacttccagatgcctggc
tacaatccctatgcctacggacagtacaacatgcccaacatgcccaacatgcccagcatg
cccaacatgcccagcatgcccaacatgcccagcatgccaaacatgcccaatatgcccaac
atgccctacataccctatcagcagactccaggacagggaggctacccagcagcccctcct
cccggacagccgtaccatggttacccccagcaaccccctcagcagcagccctactatcct
cagcaataa
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